EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000002689 (Gene tree)
Gene ID: -
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin 1b
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 23844 bases
Position: chrGeneScaffold_3476:42438-66281
Accession: ZDB-GENE-080723-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000002844	Nucleoplasmin	PF03066.15	1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000002935	-	864	-	ENSGMOP00000002844	288 (aa)	-	UPI00023EFB4B

Gene Model

Click here to download ENSGMOG00000002689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000002689's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000002689	npm1b	100	64.527	ENSAPOG00000004268	npm1b	98	62.799	Acanthochromis_polyacanthus
ENSGMOG00000002689	npm1b	100	64.527	ENSAOCG00000012549	npm1b	98	63.390	Amphiprion_ocellaris
ENSGMOG00000002689	npm1b	100	63.176	ENSAPEG00000000868	npm1b	98	62.500	Amphiprion_percula
ENSGMOG00000002689	npm1b	100	62.712	ENSATEG00000006254	npm1b	98	63.514	Anabas_testudineus
ENSGMOG00000002689	npm1b	99	44.333	ENSACAG00000015626	-	98	44.667	Anolis_carolinensis
ENSGMOG00000002689	npm1b	99	60.403	ENSAMXG00000042148	npm1b	99	61.074	Astyanax_mexicanus
ENSGMOG00000002689	npm1b	64	39.267	ENSCAFG00000023359	-	70	37.037	Canis_familiaris
ENSGMOG00000002689	npm1b	100	44.127	ENSCPBG00000021221	-	60	44.904	Chrysemys_picta_bellii
ENSGMOG00000002689	npm1b	100	61.824	ENSCSEG00000004530	npm1b	98	62.838	Cynoglossus_semilaevis
ENSGMOG00000002689	npm1b	100	62.373	ENSCVAG00000013016	npm1b	98	61.017	Cyprinodon_variegatus
ENSGMOG00000002689	npm1b	100	61.333	ENSDARG00000037675	npm1b	99	62.000	Danio_rerio
ENSGMOG00000002689	npm1b	99	60.066	ENSELUG00000022123	npm1b	98	58.416	Esox_lucius
ENSGMOG00000002689	npm1b	95	42.756	ENSFALG00000003320	-	94	44.251	Ficedula_albicollis
ENSGMOG00000002689	npm1b	100	62.162	ENSFHEG00000020794	npm1b	98	61.149	Fundulus_heteroclitus
ENSGMOG00000002689	npm1b	97	45.017	ENSGALG00000002197	-	73	43.934	Gallus_gallus
ENSGMOG00000002689	npm1b	100	58.503	ENSGAFG00000017709	npm1b	98	58.503	Gambusia_affinis
ENSGMOG00000002689	npm1b	100	64.384	ENSGACG00000016706	npm1b	100	64.041	Gasterosteus_aculeatus
ENSGMOG00000002689	npm1b	100	43.711	ENSGAGG00000020250	-	100	43.464	Gopherus_agassizii
ENSGMOG00000002689	npm1b	100	58.667	ENSHBUG00000019903	npm1b	93	61.695	Haplochromis_burtoni
ENSGMOG00000002689	npm1b	100	61.017	ENSHCOG00000003895	npm1b	98	61.017	Hippocampus_comes
ENSGMOG00000002689	npm1b	100	58.497	ENSIPUG00000020165	npm1b	99	58.746	Ictalurus_punctatus
ENSGMOG00000002689	npm1b	100	58.194	ENSKMAG00000008260	npm1b	99	61.433	Kryptolebias_marmoratus
ENSGMOG00000002689	npm1b	97	37.716	ENSLACG00000013460	-	100	40.777	Latimeria_chalumnae
ENSGMOG00000002689	npm1b	95	44.554	ENSLACG00000001779	-	100	45.614	Latimeria_chalumnae
ENSGMOG00000002689	npm1b	94	43.564	ENSLOCG00000001942	npm1b	99	43.894	Lepisosteus_oculatus
ENSGMOG00000002689	npm1b	70	58.879	ENSMAMG00000015335	npm1b	97	58.411	Mastacembelus_armatus
ENSGMOG00000002689	npm1b	94	43.310	ENSMGAG00000001591	-	100	43.310	Meleagris_gallopavo
ENSGMOG00000002689	npm1b	80	62.869	ENSMALG00000015383	npm1b	98	62.447	Monopterus_albus
ENSGMOG00000002689	npm1b	100	57.047	ENSONIG00000001397	npm1b	98	59.524	Oreochromis_niloticus
ENSGMOG00000002689	npm1b	99	52.881	ENSOMEG00000003414	npm1b	100	49.488	Oryzias_melastigma
ENSGMOG00000002689	npm1b	99	55.960	ENSPKIG00000020050	npm1b	98	55.298	Paramormyrops_kingsleyae
ENSGMOG00000002689	npm1b	97	40.461	ENSPSIG00000011204	-	92	42.424	Pelodiscus_sinensis
ENSGMOG00000002689	npm1b	89	35.165	ENSPMAG00000004930	npm1b	99	36.207	Petromyzon_marinus
ENSGMOG00000002689	npm1b	100	60.678	ENSPFOG00000018357	npm1b	98	59.322	Poecilia_formosa
ENSGMOG00000002689	npm1b	99	60.274	ENSPNAG00000005498	npm1b	99	60.274	Pygocentrus_nattereri
ENSGMOG00000002689	npm1b	99	53.333	ENSSFOG00015005064	npm1b	98	53.333	Scleropages_formosus
ENSGMOG00000002689	npm1b	100	59.184	ENSSMAG00000008088	npm1b	98	59.524	Scophthalmus_maximus
ENSGMOG00000002689	npm1b	100	66.892	ENSSDUG00000007726	npm1b	98	64.527	Seriola_dumerili
ENSGMOG00000002689	npm1b	100	66.554	ENSSLDG00000021396	npm1b	98	64.865	Seriola_lalandi_dorsalis
ENSGMOG00000002689	npm1b	100	59.866	ENSSPAG00000011152	npm1b	98	61.513	Stegastes_partitus
ENSGMOG00000002689	npm1b	94	43.554	ENSTGUG00000014970	-	100	43.554	Taeniopygia_guttata
ENSGMOG00000002689	npm1b	100	60.135	ENSTRUG00000008105	npm1b	94	59.797	Takifugu_rubripes
ENSGMOG00000002689	npm1b	100	57.679	ENSTNIG00000013057	npm1b	99	57.338	Tetraodon_nigroviridis
ENSGMOG00000002689	npm1b	100	41.270	ENSXETG00000008403	npm1	99	37.377	Xenopus_tropicalis
ENSGMOG00000002689	npm1b	100	60.678	ENSXMAG00000001986	npm1b	98	59.322	Xiphophorus_maculatus