EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000002972 (Gene tree)
Gene ID: -
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 995 bases
Position: chrGeneScaffold_3872:1065-2059
Accession: ZDB-GENE-101014-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000003111	MRP-S32	PF10210.9	9.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000003209	-	291	-	ENSGMOP00000003111	97 (aa)	-	UPI00023EFFEB

Gene Model

Click here to download ENSGMOG00000002972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000002972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000002972	mrpl42	99	78.351	ENSAPOG00000010677	mrpl42	67	78.351	Acanthochromis_polyacanthus
ENSGMOG00000002972	mrpl42	99	80.208	ENSAOCG00000011620	mrpl42	67	80.208	Amphiprion_ocellaris
ENSGMOG00000002972	mrpl42	99	80.208	ENSAPEG00000019516	mrpl42	67	80.208	Amphiprion_percula
ENSGMOG00000002972	mrpl42	86	80.723	ENSATEG00000014106	mrpl42	63	80.723	Anabas_testudineus
ENSGMOG00000002972	mrpl42	100	68.041	ENSACAG00000012606	MRPL42	66	68.041	Anolis_carolinensis
ENSGMOG00000002972	mrpl42	99	78.125	ENSACLG00000026856	mrpl42	66	78.125	Astatotilapia_calliptera
ENSGMOG00000002972	mrpl42	100	56.701	ENSAMXG00000035149	mrpl42	71	56.701	Astyanax_mexicanus
ENSGMOG00000002972	mrpl42	97	69.149	ENSCSEG00000010067	mrpl42	67	69.149	Cynoglossus_semilaevis
ENSGMOG00000002972	mrpl42	100	81.443	ENSCVAG00000002612	mrpl42	67	81.443	Cyprinodon_variegatus
ENSGMOG00000002972	mrpl42	100	67.010	ENSDARG00000079391	mrpl42	67	67.010	Danio_rerio
ENSGMOG00000002972	mrpl42	100	49.515	ENSEBUG00000005581	mrpl42	77	49.515	Eptatretus_burgeri
ENSGMOG00000002972	mrpl42	99	78.125	ENSELUG00000001973	mrpl42	67	78.125	Esox_lucius
ENSGMOG00000002972	mrpl42	98	81.053	ENSFHEG00000018696	mrpl42	66	81.053	Fundulus_heteroclitus
ENSGMOG00000002972	mrpl42	100	83.505	ENSGAFG00000018373	mrpl42	69	83.505	Gambusia_affinis
ENSGMOG00000002972	mrpl42	99	79.167	ENSGACG00000018811	mrpl42	99	79.167	Gasterosteus_aculeatus
ENSGMOG00000002972	mrpl42	99	78.125	ENSHBUG00000015960	mrpl42	66	78.125	Haplochromis_burtoni
ENSGMOG00000002972	mrpl42	99	73.958	ENSHCOG00000014046	mrpl42	67	73.958	Hippocampus_comes
ENSGMOG00000002972	mrpl42	99	59.375	ENSIPUG00000015395	mrpl42	65	59.375	Ictalurus_punctatus
ENSGMOG00000002972	mrpl42	100	77.320	ENSKMAG00000013671	mrpl42	68	77.320	Kryptolebias_marmoratus
ENSGMOG00000002972	mrpl42	99	78.125	ENSLBEG00000028618	mrpl42	65	78.125	Labrus_bergylta
ENSGMOG00000002972	mrpl42	74	65.278	ENSLOCG00000015284	mrpl42	57	65.278	Lepisosteus_oculatus
ENSGMOG00000002972	mrpl42	99	79.167	ENSMAMG00000009737	mrpl42	69	79.167	Mastacembelus_armatus
ENSGMOG00000002972	mrpl42	99	78.125	ENSMZEG00005008545	mrpl42	63	78.125	Maylandia_zebra
ENSGMOG00000002972	mrpl42	86	74.699	ENSMMOG00000002317	mrpl42	55	74.699	Mola_mola
ENSGMOG00000002972	mrpl42	100	77.320	ENSMALG00000015794	mrpl42	60	77.320	Monopterus_albus
ENSGMOG00000002972	mrpl42	100	78.351	ENSNBRG00000003307	mrpl42	67	78.351	Neolamprologus_brichardi
ENSGMOG00000002972	mrpl42	99	78.125	ENSONIG00000011753	mrpl42	66	78.125	Oreochromis_niloticus
ENSGMOG00000002972	mrpl42	100	58.763	ENSOANG00000019984	-	66	58.763	Ornithorhynchus_anatinus
ENSGMOG00000002972	mrpl42	100	75.258	ENSORLG00000013500	mrpl42	56	75.258	Oryzias_latipes
ENSGMOG00000002972	mrpl42	100	75.258	ENSORLG00020000548	mrpl42	66	75.258	Oryzias_latipes_hni
ENSGMOG00000002972	mrpl42	100	76.289	ENSORLG00015016984	mrpl42	67	76.289	Oryzias_latipes_hsok
ENSGMOG00000002972	mrpl42	99	78.125	ENSOMEG00000010700	mrpl42	66	78.125	Oryzias_melastigma
ENSGMOG00000002972	mrpl42	100	78.351	ENSPKIG00000025457	mrpl42	66	78.351	Paramormyrops_kingsleyae
ENSGMOG00000002972	mrpl42	99	70.833	ENSPMGG00000019705	mrpl42	68	70.833	Periophthalmus_magnuspinnatus
ENSGMOG00000002972	mrpl42	100	54.000	ENSPMAG00000008091	mrpl42	65	54.000	Petromyzon_marinus
ENSGMOG00000002972	mrpl42	100	82.474	ENSPFOG00000016539	mrpl42	66	82.474	Poecilia_formosa
ENSGMOG00000002972	mrpl42	100	83.505	ENSPLAG00000001255	mrpl42	67	83.505	Poecilia_latipinna
ENSGMOG00000002972	mrpl42	100	82.474	ENSPMEG00000016462	mrpl42	67	82.474	Poecilia_mexicana
ENSGMOG00000002972	mrpl42	100	76.289	ENSPREG00000012053	mrpl42	70	76.289	Poecilia_reticulata
ENSGMOG00000002972	mrpl42	99	78.125	ENSPNYG00000009586	mrpl42	66	78.125	Pundamilia_nyererei
ENSGMOG00000002972	mrpl42	99	61.458	ENSPNAG00000020753	mrpl42	66	61.458	Pygocentrus_nattereri
ENSGMOG00000002972	mrpl42	99	76.042	ENSSMAG00000000262	mrpl42	66	76.042	Scophthalmus_maximus
ENSGMOG00000002972	mrpl42	99	78.125	ENSSDUG00000005949	mrpl42	66	78.125	Seriola_dumerili
ENSGMOG00000002972	mrpl42	99	78.125	ENSSLDG00000010159	mrpl42	66	78.125	Seriola_lalandi_dorsalis
ENSGMOG00000002972	mrpl42	100	74.227	ENSTRUG00000025949	mrpl42	66	74.227	Takifugu_rubripes
ENSGMOG00000002972	mrpl42	100	62.887	ENSXETG00000032902	mrpl42	78	62.887	Xenopus_tropicalis
ENSGMOG00000002972	mrpl42	100	82.474	ENSXCOG00000013875	mrpl42	75	82.474	Xiphophorus_couchianus