EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000003238 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 4723 bases
Position: chrGeneScaffold_3758:406085-410807
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000003685	zf-C2H2	PF00096.26	1.7e-41	1	8
ENSGMOP00000003685	zf-C2H2	PF00096.26	1.7e-41	2	8
ENSGMOP00000003685	zf-C2H2	PF00096.26	1.7e-41	3	8
ENSGMOP00000003685	zf-C2H2	PF00096.26	1.7e-41	4	8
ENSGMOP00000003685	zf-C2H2	PF00096.26	1.7e-41	5	8
ENSGMOP00000003685	zf-C2H2	PF00096.26	1.7e-41	6	8
ENSGMOP00000003685	zf-C2H2	PF00096.26	1.7e-41	7	8
ENSGMOP00000003685	zf-C2H2	PF00096.26	1.7e-41	8	8
ENSGMOP00000003710	zf-C2H2	PF00096.26	1.8e-41	1	8
ENSGMOP00000003710	zf-C2H2	PF00096.26	1.8e-41	2	8
ENSGMOP00000003710	zf-C2H2	PF00096.26	1.8e-41	3	8
ENSGMOP00000003710	zf-C2H2	PF00096.26	1.8e-41	4	8
ENSGMOP00000003710	zf-C2H2	PF00096.26	1.8e-41	5	8
ENSGMOP00000003710	zf-C2H2	PF00096.26	1.8e-41	6	8
ENSGMOP00000003710	zf-C2H2	PF00096.26	1.8e-41	7	8
ENSGMOP00000003710	zf-C2H2	PF00096.26	1.8e-41	8	8
ENSGMOP00000003432	zf-C2H2	PF00096.26	5.8e-41	1	8
ENSGMOP00000003432	zf-C2H2	PF00096.26	5.8e-41	2	8
ENSGMOP00000003432	zf-C2H2	PF00096.26	5.8e-41	3	8
ENSGMOP00000003432	zf-C2H2	PF00096.26	5.8e-41	4	8
ENSGMOP00000003432	zf-C2H2	PF00096.26	5.8e-41	5	8
ENSGMOP00000003432	zf-C2H2	PF00096.26	5.8e-41	6	8
ENSGMOP00000003432	zf-C2H2	PF00096.26	5.8e-41	7	8
ENSGMOP00000003432	zf-C2H2	PF00096.26	5.8e-41	8	8
ENSGMOP00000003757	zf-C2H2	PF00096.26	6.1e-41	1	8
ENSGMOP00000003757	zf-C2H2	PF00096.26	6.1e-41	2	8
ENSGMOP00000003757	zf-C2H2	PF00096.26	6.1e-41	3	8
ENSGMOP00000003757	zf-C2H2	PF00096.26	6.1e-41	4	8
ENSGMOP00000003757	zf-C2H2	PF00096.26	6.1e-41	5	8
ENSGMOP00000003757	zf-C2H2	PF00096.26	6.1e-41	6	8
ENSGMOP00000003757	zf-C2H2	PF00096.26	6.1e-41	7	8
ENSGMOP00000003757	zf-C2H2	PF00096.26	6.1e-41	8	8
ENSGMOP00000003419	zf-C2H2	PF00096.26	6.6e-41	1	8
ENSGMOP00000003419	zf-C2H2	PF00096.26	6.6e-41	2	8
ENSGMOP00000003419	zf-C2H2	PF00096.26	6.6e-41	3	8
ENSGMOP00000003419	zf-C2H2	PF00096.26	6.6e-41	4	8
ENSGMOP00000003419	zf-C2H2	PF00096.26	6.6e-41	5	8
ENSGMOP00000003419	zf-C2H2	PF00096.26	6.6e-41	6	8
ENSGMOP00000003419	zf-C2H2	PF00096.26	6.6e-41	7	8
ENSGMOP00000003419	zf-C2H2	PF00096.26	6.6e-41	8	8
ENSGMOP00000003782	zf-C2H2	PF00096.26	2.5e-40	1	8
ENSGMOP00000003782	zf-C2H2	PF00096.26	2.5e-40	2	8
ENSGMOP00000003782	zf-C2H2	PF00096.26	2.5e-40	3	8
ENSGMOP00000003782	zf-C2H2	PF00096.26	2.5e-40	4	8
ENSGMOP00000003782	zf-C2H2	PF00096.26	2.5e-40	5	8
ENSGMOP00000003782	zf-C2H2	PF00096.26	2.5e-40	6	8
ENSGMOP00000003782	zf-C2H2	PF00096.26	2.5e-40	7	8
ENSGMOP00000003782	zf-C2H2	PF00096.26	2.5e-40	8	8
ENSGMOP00000003773	zf-C2H2	PF00096.26	4.3e-39	1	8
ENSGMOP00000003773	zf-C2H2	PF00096.26	4.3e-39	2	8
ENSGMOP00000003773	zf-C2H2	PF00096.26	4.3e-39	3	8
ENSGMOP00000003773	zf-C2H2	PF00096.26	4.3e-39	4	8
ENSGMOP00000003773	zf-C2H2	PF00096.26	4.3e-39	5	8
ENSGMOP00000003773	zf-C2H2	PF00096.26	4.3e-39	6	8
ENSGMOP00000003773	zf-C2H2	PF00096.26	4.3e-39	7	8
ENSGMOP00000003773	zf-C2H2	PF00096.26	4.3e-39	8	8
ENSGMOP00000003453	zf-C2H2	PF00096.26	1.4e-38	1	8
ENSGMOP00000003453	zf-C2H2	PF00096.26	1.4e-38	2	8
ENSGMOP00000003453	zf-C2H2	PF00096.26	1.4e-38	3	8
ENSGMOP00000003453	zf-C2H2	PF00096.26	1.4e-38	4	8
ENSGMOP00000003453	zf-C2H2	PF00096.26	1.4e-38	5	8
ENSGMOP00000003453	zf-C2H2	PF00096.26	1.4e-38	6	8
ENSGMOP00000003453	zf-C2H2	PF00096.26	1.4e-38	7	8
ENSGMOP00000003453	zf-C2H2	PF00096.26	1.4e-38	8	8
ENSGMOP00000003471	zf-C2H2	PF00096.26	9.5e-37	1	7
ENSGMOP00000003471	zf-C2H2	PF00096.26	9.5e-37	2	7
ENSGMOP00000003471	zf-C2H2	PF00096.26	9.5e-37	3	7
ENSGMOP00000003471	zf-C2H2	PF00096.26	9.5e-37	4	7
ENSGMOP00000003471	zf-C2H2	PF00096.26	9.5e-37	5	7
ENSGMOP00000003471	zf-C2H2	PF00096.26	9.5e-37	6	7
ENSGMOP00000003471	zf-C2H2	PF00096.26	9.5e-37	7	7
ENSGMOP00000003487	zf-C2H2	PF00096.26	1.9e-36	1	7
ENSGMOP00000003487	zf-C2H2	PF00096.26	1.9e-36	2	7
ENSGMOP00000003487	zf-C2H2	PF00096.26	1.9e-36	3	7
ENSGMOP00000003487	zf-C2H2	PF00096.26	1.9e-36	4	7
ENSGMOP00000003487	zf-C2H2	PF00096.26	1.9e-36	5	7
ENSGMOP00000003487	zf-C2H2	PF00096.26	1.9e-36	6	7
ENSGMOP00000003487	zf-C2H2	PF00096.26	1.9e-36	7	7
ENSGMOP00000003710	zf-met	PF12874.7	6.8e-05	1	1
ENSGMOP00000003685	zf-met	PF12874.7	7.5e-05	1	1
ENSGMOP00000003453	zf-met	PF12874.7	0.0001	1	1
ENSGMOP00000003782	zf-met	PF12874.7	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000003887	-	936	-	ENSGMOP00000003773	312 (aa)	-	UPI00023F043F
ENSGMOT00000003534	-	924	-	ENSGMOP00000003432	308 (aa)	-	UPI00023F0438
ENSGMOT00000003796	-	831	-	ENSGMOP00000003685	277 (aa)	-	UPI00023F043C
ENSGMOT00000003821	-	831	-	ENSGMOP00000003710	277 (aa)	-	UPI00023F043D
ENSGMOT00000003590	-	837	-	ENSGMOP00000003487	279 (aa)	-	UPI00023F043B
ENSGMOT00000003521	-	939	-	ENSGMOP00000003419	313 (aa)	-	UPI00023F0437
ENSGMOT00000003555	-	852	-	ENSGMOP00000003453	284 (aa)	-	UPI00023F0439
ENSGMOT00000003871	-	948	-	ENSGMOP00000003757	316 (aa)	-	UPI00023F043E
ENSGMOT00000003573	-	831	-	ENSGMOP00000003471	277 (aa)	-	UPI00023F043A
ENSGMOT00000003896	-	852	-	ENSGMOP00000003782	284 (aa)	-	UPI00023F0440

Gene Model

Click here to download ENSGMOG00000003238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000003238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000003238	-	99	50.980	ENSGMOG00000003709	nktr	63	50.000
ENSGMOG00000003238	-	99	40.789	ENSGMOG00000002669	snai2	67	36.735
ENSGMOG00000003238	-	98	30.702	ENSGMOG00000005447	hinfp	57	30.986
ENSGMOG00000003238	-	93	48.529	ENSGMOG00000012038	prdm5	96	48.529
ENSGMOG00000003238	-	100	53.247	ENSGMOG00000020024	-	100	53.247
ENSGMOG00000003238	-	99	38.938	ENSGMOG00000004315	-	99	36.842
ENSGMOG00000003238	-	100	56.164	ENSGMOG00000012990	-	100	56.164
ENSGMOG00000003238	-	99	35.616	ENSGMOG00000001062	patz1	55	32.365
ENSGMOG00000003238	-	100	30.814	ENSGMOG00000012203	PRDM15	51	30.814
ENSGMOG00000003238	-	98	47.436	ENSGMOG00000016007	-	79	47.436
ENSGMOG00000003238	-	100	56.757	ENSGMOG00000017518	-	66	56.757
ENSGMOG00000003238	-	80	38.750	ENSGMOG00000020146	-	93	38.750
ENSGMOG00000003238	-	99	44.286	ENSGMOG00000000127	-	72	44.286
ENSGMOG00000003238	-	100	49.398	ENSGMOG00000020149	si:dkeyp-113d7.1	100	64.815
ENSGMOG00000003238	-	100	34.579	ENSGMOG00000004242	znf319b	89	34.579
ENSGMOG00000003238	-	100	35.200	ENSGMOG00000005137	znf526	60	36.287
ENSGMOG00000003238	-	99	44.318	ENSGMOG00000009187	ZNF626	76	44.318
ENSGMOG00000003238	-	99	43.396	ENSGMOG00000007809	-	99	43.396
ENSGMOG00000003238	-	100	38.857	ENSGMOG00000011017	GZF1	56	40.684
ENSGMOG00000003238	-	98	34.831	ENSGMOG00000009850	-	100	34.694
ENSGMOG00000003238	-	99	41.250	ENSGMOG00000007538	znf366	89	33.929
ENSGMOG00000003238	-	99	44.304	ENSGMOG00000019214	bcl6aa	50	44.304
ENSGMOG00000003238	-	100	35.122	ENSGMOG00000002344	zbtb41	67	30.811
ENSGMOG00000003238	-	100	42.105	ENSGMOG00000011409	e4f1	71	31.034
ENSGMOG00000003238	-	99	44.156	ENSGMOG00000007737	gfi1ab	56	44.156
ENSGMOG00000003238	-	100	39.024	ENSGMOG00000016554	znf646	99	39.024
ENSGMOG00000003238	-	100	42.105	ENSGMOG00000000494	-	99	35.714
ENSGMOG00000003238	-	64	30.097	ENSGMOG00000000493	-	98	30.097
ENSGMOG00000003238	-	99	43.750	ENSGMOG00000015143	-	63	43.750
ENSGMOG00000003238	-	100	36.519	ENSGMOG00000007875	ZNF319	100	36.086
ENSGMOG00000003238	-	100	35.294	ENSGMOG00000017526	-	100	41.919
ENSGMOG00000003238	-	99	44.304	ENSGMOG00000019123	gfi1b	73	39.437
ENSGMOG00000003238	-	99	46.154	ENSGMOG00000004063	ZNF628	99	41.860
ENSGMOG00000003238	-	99	32.110	ENSGMOG00000000629	scrt1b	55	38.158
ENSGMOG00000003238	-	100	45.000	ENSGMOG00000006668	znf236	71	41.584
ENSGMOG00000003238	-	100	33.766	ENSGMOG00000012893	si:ch211-216l23.1	77	30.769
ENSGMOG00000003238	-	99	43.558	ENSGMOG00000015258	ZNF384	51	43.558
ENSGMOG00000003238	-	99	44.156	ENSGMOG00000016613	-	98	44.304
ENSGMOG00000003238	-	99	40.000	ENSGMOG00000017555	znf710b	87	40.000
ENSGMOG00000003238	-	99	50.980	ENSGMOG00000005588	-	100	50.980
ENSGMOG00000003238	-	100	50.847	ENSGMOG00000018506	-	100	50.847

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000003238	-	100	42.238	ENSAPOG00000013511	-	53	42.238	Acanthochromis_polyacanthus
ENSGMOG00000003238	-	100	40.343	ENSAPOG00000004328	-	87	40.343	Acanthochromis_polyacanthus
ENSGMOG00000003238	-	100	37.795	ENSACIG00000010739	-	84	37.387	Amphilophus_citrinellus
ENSGMOG00000003238	-	100	43.103	ENSAOCG00000007045	-	85	41.202	Amphiprion_ocellaris
ENSGMOG00000003238	-	100	44.231	ENSAPEG00000016483	-	59	43.284	Amphiprion_percula
ENSGMOG00000003238	-	100	43.103	ENSAPEG00000001596	-	76	43.103	Amphiprion_percula
ENSGMOG00000003238	-	100	41.202	ENSATEG00000006085	-	88	41.202	Anabas_testudineus
ENSGMOG00000003238	-	100	46.304	ENSACAG00000000082	-	99	47.244	Anolis_carolinensis
ENSGMOG00000003238	-	100	48.810	ENSACAG00000025537	-	96	48.810	Anolis_carolinensis
ENSGMOG00000003238	-	99	45.669	ENSAMXG00000012873	-	93	44.141	Astyanax_mexicanus
ENSGMOG00000003238	-	100	48.101	ENSAMXG00000036257	-	96	45.946	Astyanax_mexicanus
ENSGMOG00000003238	-	100	48.718	ENSAMXG00000026143	-	99	48.718	Astyanax_mexicanus
ENSGMOG00000003238	-	100	47.426	ENSAMXG00000035949	-	79	51.837	Astyanax_mexicanus
ENSGMOG00000003238	-	98	49.412	ENSAMXG00000032237	-	95	49.412	Astyanax_mexicanus
ENSGMOG00000003238	-	99	52.941	ENSAMXG00000035145	-	63	53.684	Astyanax_mexicanus
ENSGMOG00000003238	-	100	54.430	ENSAMXG00000033013	-	85	54.430	Astyanax_mexicanus
ENSGMOG00000003238	-	100	40.690	ENSCVAG00000011235	-	89	40.711	Cyprinodon_variegatus
ENSGMOG00000003238	-	100	45.562	ENSELUG00000013357	-	93	45.562	Esox_lucius
ENSGMOG00000003238	-	100	41.573	ENSELUG00000013844	-	85	32.895	Esox_lucius
ENSGMOG00000003238	-	100	40.678	ENSELUG00000021287	-	83	41.473	Esox_lucius
ENSGMOG00000003238	-	100	46.429	ENSFHEG00000019915	-	86	43.284	Fundulus_heteroclitus
ENSGMOG00000003238	-	100	41.631	ENSGAFG00000012977	-	89	41.991	Gambusia_affinis
ENSGMOG00000003238	-	100	44.643	ENSGAFG00000003150	-	94	51.020	Gambusia_affinis
ENSGMOG00000003238	-	100	54.430	ENSIPUG00000021556	-	96	43.429	Ictalurus_punctatus
ENSGMOG00000003238	-	100	45.333	ENSIPUG00000004428	-	88	42.515	Ictalurus_punctatus
ENSGMOG00000003238	-	100	46.094	ENSIPUG00000006916	-	77	46.094	Ictalurus_punctatus
ENSGMOG00000003238	-	99	40.800	ENSKMAG00000004988	-	87	40.458	Kryptolebias_marmoratus
ENSGMOG00000003238	-	99	52.727	ENSLOCG00000014366	-	97	47.027	Lepisosteus_oculatus
ENSGMOG00000003238	-	100	47.032	ENSLOCG00000014144	-	100	47.032	Lepisosteus_oculatus
ENSGMOG00000003238	-	100	50.667	ENSMAMG00000019301	-	95	48.503	Mastacembelus_armatus
ENSGMOG00000003238	-	99	46.835	ENSMAMG00000016542	-	61	43.284	Mastacembelus_armatus
ENSGMOG00000003238	-	100	55.844	ENSMMOG00000009852	-	85	55.844	Mola_mola
ENSGMOG00000003238	-	100	53.846	ENSMALG00000005554	-	85	53.846	Monopterus_albus
ENSGMOG00000003238	-	100	53.571	ENSOCUG00000005876	-	100	53.571	Oryctolagus_cuniculus
ENSGMOG00000003238	-	99	44.954	ENSPKIG00000006616	-	64	44.545	Paramormyrops_kingsleyae
ENSGMOG00000003238	-	99	46.512	ENSPMGG00000017633	-	82	46.512	Periophthalmus_magnuspinnatus
ENSGMOG00000003238	-	100	41.631	ENSPFOG00000010682	-	97	40.323	Poecilia_formosa
ENSGMOG00000003238	-	99	38.372	ENSPLAG00000002892	-	69	46.552	Poecilia_latipinna
ENSGMOG00000003238	-	100	41.631	ENSPMEG00000001399	-	94	39.041	Poecilia_mexicana
ENSGMOG00000003238	-	99	41.935	ENSPREG00000002582	-	68	35.266	Poecilia_reticulata
ENSGMOG00000003238	-	100	41.631	ENSPREG00000001386	-	89	41.991	Poecilia_reticulata
ENSGMOG00000003238	-	100	39.298	ENSPNAG00000025570	-	84	39.298	Pygocentrus_nattereri
ENSGMOG00000003238	-	100	43.651	ENSPNAG00000000219	-	97	38.824	Pygocentrus_nattereri
ENSGMOG00000003238	-	100	47.222	ENSPNAG00000015116	-	67	57.407	Pygocentrus_nattereri
ENSGMOG00000003238	-	99	49.057	ENSSFOG00015006108	-	56	49.057	Scleropages_formosus
ENSGMOG00000003238	-	99	50.633	ENSSMAG00000009115	-	91	57.692	Scophthalmus_maximus
ENSGMOG00000003238	-	99	48.101	ENSSDUG00000002195	-	95	50.000	Seriola_dumerili
ENSGMOG00000003238	-	100	43.103	ENSSDUG00000006463	-	85	43.103	Seriola_dumerili
ENSGMOG00000003238	-	100	45.714	ENSSLDG00000020727	-	88	55.769	Seriola_lalandi_dorsalis
ENSGMOG00000003238	-	100	45.390	ENSSLDG00000006724	-	98	45.390	Seriola_lalandi_dorsalis
ENSGMOG00000003238	-	99	54.430	ENSSPAG00000021008	-	94	51.923	Stegastes_partitus
ENSGMOG00000003238	-	100	46.667	ENSSPAG00000012960	-	98	46.667	Stegastes_partitus
ENSGMOG00000003238	-	100	38.323	ENSTRUG00000021675	-	77	39.600	Takifugu_rubripes
ENSGMOG00000003238	-	99	50.649	ENSTRUG00000005321	-	99	44.712	Takifugu_rubripes
ENSGMOG00000003238	-	99	39.300	ENSTNIG00000008200	-	100	39.300	Tetraodon_nigroviridis
ENSGMOG00000003238	-	99	48.148	ENSTNIG00000000320	-	100	46.667	Tetraodon_nigroviridis
ENSGMOG00000003238	-	100	50.000	ENSXETG00000006575	znf420	77	50.000	Xenopus_tropicalis
ENSGMOG00000003238	-	98	50.617	ENSXCOG00000009665	-	92	50.617	Xiphophorus_couchianus
ENSGMOG00000003238	-	98	41.631	ENSXMAG00000028625	-	89	41.991	Xiphophorus_maculatus