EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000003336 (Gene tree)
Gene ID: -
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 4439 bases
Position: chrGeneScaffold_3345:22783-27221
Accession: 17631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000003549	RNA_pol_I_A49	PF06870.12	3.2e-79	1	2
ENSGMOP00000003549	RNA_pol_I_A49	PF06870.12	3.2e-79	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000003655	POLR1E-201	1206	-	ENSGMOP00000003549	402 (aa)	-	UPI00023F004D

Gene Model

Click here to download ENSGMOG00000003336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000003336's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000003336	POLR1E	93	41.562	ENSG00000137054	POLR1E	93	41.310	Homo_sapiens
ENSGMOG00000003336	POLR1E	99	51.790	ENSAPOG00000012452	polr1e	99	51.790	Acanthochromis_polyacanthus
ENSGMOG00000003336	POLR1E	93	35.730	ENSAMEG00000010193	POLR1E	91	34.910	Ailuropoda_melanoleuca
ENSGMOG00000003336	POLR1E	94	54.881	ENSACIG00000009884	polr1e	99	54.881	Amphilophus_citrinellus
ENSGMOG00000003336	POLR1E	99	55.714	ENSAOCG00000005665	polr1e	99	55.714	Amphiprion_ocellaris
ENSGMOG00000003336	POLR1E	99	55.952	ENSAPEG00000020581	polr1e	99	55.952	Amphiprion_percula
ENSGMOG00000003336	POLR1E	99	55.000	ENSATEG00000020609	polr1e	99	55.000	Anabas_testudineus
ENSGMOG00000003336	POLR1E	76	35.897	ENSAPLG00000010340	POLR1E	91	35.897	Anas_platyrhynchos
ENSGMOG00000003336	POLR1E	93	39.604	ENSANAG00000038046	POLR1E	94	39.356	Aotus_nancymaae
ENSGMOG00000003336	POLR1E	99	55.000	ENSACLG00000013685	polr1e	98	55.000	Astatotilapia_calliptera
ENSGMOG00000003336	POLR1E	99	45.455	ENSAMXG00000018181	polr1e	99	45.455	Astyanax_mexicanus
ENSGMOG00000003336	POLR1E	96	39.173	ENSBTAG00000012243	POLR1E	96	38.293	Bos_taurus
ENSGMOG00000003336	POLR1E	90	39.948	ENSCJAG00000010512	POLR1E	92	38.710	Callithrix_jacchus
ENSGMOG00000003336	POLR1E	93	39.646	ENSCAFG00000002377	POLR1E	94	38.693	Canis_familiaris
ENSGMOG00000003336	POLR1E	93	39.646	ENSCAFG00020017851	POLR1E	94	38.442	Canis_lupus_dingo
ENSGMOG00000003336	POLR1E	93	39.899	ENSCHIG00000019479	POLR1E	93	38.987	Capra_hircus
ENSGMOG00000003336	POLR1E	97	38.609	ENSTSYG00000002075	POLR1E	97	38.369	Carlito_syrichta
ENSGMOG00000003336	POLR1E	67	39.209	ENSCAPG00000015653	POLR1E	93	37.906	Cavia_aperea
ENSGMOG00000003336	POLR1E	93	40.852	ENSCPOG00000009965	POLR1E	93	39.950	Cavia_porcellus
ENSGMOG00000003336	POLR1E	93	39.740	ENSCCAG00000029460	POLR1E	93	39.481	Cebus_capucinus
ENSGMOG00000003336	POLR1E	93	41.562	ENSCATG00000031732	POLR1E	91	47.619	Cercocebus_atys
ENSGMOG00000003336	POLR1E	83	40.997	ENSCLAG00000012701	POLR1E	92	40.000	Chinchilla_lanigera
ENSGMOG00000003336	POLR1E	93	41.310	ENSCSAG00000010782	POLR1E	93	41.058	Chlorocebus_sabaeus
ENSGMOG00000003336	POLR1E	90	36.979	ENSCHOG00000013024	POLR1E	79	36.292	Choloepus_hoffmanni
ENSGMOG00000003336	POLR1E	96	38.257	ENSCPBG00000006923	POLR1E	97	38.257	Chrysemys_picta_bellii
ENSGMOG00000003336	POLR1E	93	40.806	ENSCANG00000036112	POLR1E	91	47.619	Colobus_angolensis_palliatus
ENSGMOG00000003336	POLR1E	93	50.476	ENSCGRG00001006197	Polr1e	80	50.476	Cricetulus_griseus_chok1gshd
ENSGMOG00000003336	POLR1E	93	49.524	ENSCGRG00000006430	Polr1e	80	49.524	Cricetulus_griseus_crigri
ENSGMOG00000003336	POLR1E	100	50.831	ENSCSEG00000005121	polr1e	100	50.831	Cynoglossus_semilaevis
ENSGMOG00000003336	POLR1E	99	53.222	ENSCVAG00000019759	polr1e	99	53.222	Cyprinodon_variegatus
ENSGMOG00000003336	POLR1E	96	45.185	ENSDARG00000006434	polr1e	100	44.893	Danio_rerio
ENSGMOG00000003336	POLR1E	93	47.619	ENSDNOG00000010257	POLR1E	86	47.619	Dasypus_novemcinctus
ENSGMOG00000003336	POLR1E	81	37.644	ENSETEG00000018204	POLR1E	96	37.644	Echinops_telfairi
ENSGMOG00000003336	POLR1E	97	39.614	ENSEASG00005000675	POLR1E	97	38.741	Equus_asinus_asinus
ENSGMOG00000003336	POLR1E	97	39.614	ENSECAG00000014669	POLR1E	97	38.741	Equus_caballus
ENSGMOG00000003336	POLR1E	90	35.509	ENSEEUG00000011928	POLR1E	80	35.248	Erinaceus_europaeus
ENSGMOG00000003336	POLR1E	99	52.506	ENSELUG00000008150	polr1e	98	52.506	Esox_lucius
ENSGMOG00000003336	POLR1E	96	40.097	ENSFCAG00000013081	POLR1E	94	39.651	Felis_catus
ENSGMOG00000003336	POLR1E	91	37.209	ENSFALG00000012950	POLR1E	96	37.209	Ficedula_albicollis
ENSGMOG00000003336	POLR1E	93	40.648	ENSFDAG00000016917	POLR1E	93	40.000	Fukomys_damarensis
ENSGMOG00000003336	POLR1E	99	52.619	ENSFHEG00000009801	polr1e	99	52.619	Fundulus_heteroclitus
ENSGMOG00000003336	POLR1E	94	36.683	ENSGALG00000005395	POLR1E	94	36.683	Gallus_gallus
ENSGMOG00000003336	POLR1E	99	53.222	ENSGAFG00000004850	polr1e	99	53.222	Gambusia_affinis
ENSGMOG00000003336	POLR1E	99	51.544	ENSGACG00000016087	polr1e	99	51.544	Gasterosteus_aculeatus
ENSGMOG00000003336	POLR1E	93	37.598	ENSGAGG00000001659	POLR1E	96	37.310	Gopherus_agassizii
ENSGMOG00000003336	POLR1E	93	41.562	ENSGGOG00000001882	POLR1E	92	47.619	Gorilla_gorilla
ENSGMOG00000003336	POLR1E	99	54.762	ENSHBUG00000002559	polr1e	98	54.762	Haplochromis_burtoni
ENSGMOG00000003336	POLR1E	93	40.150	ENSHGLG00000002036	POLR1E	94	39.250	Heterocephalus_glaber_female
ENSGMOG00000003336	POLR1E	93	40.399	ENSHGLG00100012784	POLR1E	94	39.500	Heterocephalus_glaber_male
ENSGMOG00000003336	POLR1E	99	53.589	ENSHCOG00000002774	polr1e	99	53.589	Hippocampus_comes
ENSGMOG00000003336	POLR1E	98	44.578	ENSIPUG00000003019	polr1e	99	44.578	Ictalurus_punctatus
ENSGMOG00000003336	POLR1E	95	39.259	ENSSTOG00000009810	POLR1E	96	38.366	Ictidomys_tridecemlineatus
ENSGMOG00000003336	POLR1E	97	39.713	ENSJJAG00000020731	Polr1e	94	39.130	Jaculus_jaculus
ENSGMOG00000003336	POLR1E	99	52.143	ENSKMAG00000000046	polr1e	99	52.143	Kryptolebias_marmoratus
ENSGMOG00000003336	POLR1E	100	55.083	ENSLBEG00000003104	polr1e	99	55.083	Labrus_bergylta
ENSGMOG00000003336	POLR1E	82	40.282	ENSLACG00000003416	POLR1E	96	40.845	Latimeria_chalumnae
ENSGMOG00000003336	POLR1E	98	45.585	ENSLOCG00000012859	polr1e	99	45.585	Lepisosteus_oculatus
ENSGMOG00000003336	POLR1E	93	48.077	ENSLAFG00000012831	POLR1E	84	48.077	Loxodonta_africana
ENSGMOG00000003336	POLR1E	93	41.562	ENSMFAG00000045465	POLR1E	91	47.619	Macaca_fascicularis
ENSGMOG00000003336	POLR1E	93	41.562	ENSMMUG00000017892	POLR1E	91	47.619	Macaca_mulatta
ENSGMOG00000003336	POLR1E	93	38.272	ENSMNEG00000040283	POLR1E	86	47.368	Macaca_nemestrina
ENSGMOG00000003336	POLR1E	93	41.562	ENSMLEG00000031135	POLR1E	91	47.619	Mandrillus_leucophaeus
ENSGMOG00000003336	POLR1E	100	53.664	ENSMAMG00000001260	polr1e	99	53.664	Mastacembelus_armatus
ENSGMOG00000003336	POLR1E	99	55.000	ENSMZEG00005021536	polr1e	98	55.000	Maylandia_zebra
ENSGMOG00000003336	POLR1E	93	38.442	ENSMAUG00000021044	Polr1e	90	38.442	Mesocricetus_auratus
ENSGMOG00000003336	POLR1E	96	40.389	ENSMICG00000003673	POLR1E	97	39.225	Microcebus_murinus
ENSGMOG00000003336	POLR1E	93	38.404	ENSMOCG00000012920	Polr1e	91	38.404	Microtus_ochrogaster
ENSGMOG00000003336	POLR1E	99	52.732	ENSMMOG00000007391	polr1e	99	52.732	Mola_mola
ENSGMOG00000003336	POLR1E	95	37.284	ENSMODG00000002884	POLR1E	98	37.284	Monodelphis_domestica
ENSGMOG00000003336	POLR1E	99	53.571	ENSMALG00000002665	polr1e	98	53.571	Monopterus_albus
ENSGMOG00000003336	POLR1E	93	49.524	MGP_CAROLIEiJ_G0025967	Polr1e	93	38.701	Mus_caroli
ENSGMOG00000003336	POLR1E	93	51.429	ENSMUSG00000028318	Polr1e	93	38.860	Mus_musculus
ENSGMOG00000003336	POLR1E	97	52.381	MGP_PahariEiJ_G0024114	Polr1e	93	39.583	Mus_pahari
ENSGMOG00000003336	POLR1E	93	51.429	MGP_SPRETEiJ_G0026930	Polr1e	93	39.119	Mus_spretus
ENSGMOG00000003336	POLR1E	93	50.495	ENSMPUG00000006040	POLR1E	84	49.038	Mustela_putorius_furo
ENSGMOG00000003336	POLR1E	96	40.146	ENSMLUG00000012688	POLR1E	94	38.983	Myotis_lucifugus
ENSGMOG00000003336	POLR1E	93	38.653	ENSNGAG00000002520	Polr1e	91	38.653	Nannospalax_galili
ENSGMOG00000003336	POLR1E	99	54.762	ENSNBRG00000016822	polr1e	98	54.762	Neolamprologus_brichardi
ENSGMOG00000003336	POLR1E	93	41.562	ENSNLEG00000003616	POLR1E	91	47.619	Nomascus_leucogenys
ENSGMOG00000003336	POLR1E	71	41.991	ENSMEUG00000015372	-	80	41.991	Notamacropus_eugenii
ENSGMOG00000003336	POLR1E	81	36.571	ENSOPRG00000014206	POLR1E	95	35.817	Ochotona_princeps
ENSGMOG00000003336	POLR1E	93	40.150	ENSODEG00000014565	POLR1E	80	50.476	Octodon_degus
ENSGMOG00000003336	POLR1E	99	54.762	ENSONIG00000008921	polr1e	98	54.762	Oreochromis_niloticus
ENSGMOG00000003336	POLR1E	95	39.506	ENSOCUG00000024773	POLR1E	95	38.821	Oryctolagus_cuniculus
ENSGMOG00000003336	POLR1E	99	51.306	ENSORLG00000005143	polr1e	99	51.306	Oryzias_latipes
ENSGMOG00000003336	POLR1E	94	49.606	ENSORLG00020007271	polr1e	99	49.606	Oryzias_latipes_hni
ENSGMOG00000003336	POLR1E	99	51.544	ENSORLG00015000137	polr1e	99	51.544	Oryzias_latipes_hsok
ENSGMOG00000003336	POLR1E	99	50.476	ENSOMEG00000013264	polr1e	97	50.476	Oryzias_melastigma
ENSGMOG00000003336	POLR1E	97	38.015	ENSOGAG00000012981	POLR1E	92	38.693	Otolemur_garnettii
ENSGMOG00000003336	POLR1E	93	40.152	ENSOARG00000011465	POLR1E	90	39.241	Ovis_aries
ENSGMOG00000003336	POLR1E	93	41.562	ENSPPAG00000034566	POLR1E	91	47.619	Pan_paniscus
ENSGMOG00000003336	POLR1E	93	40.852	ENSPPRG00000005649	POLR1E	94	39.651	Panthera_pardus
ENSGMOG00000003336	POLR1E	93	40.852	ENSPTIG00000009774	POLR1E	94	39.651	Panthera_tigris_altaica
ENSGMOG00000003336	POLR1E	93	41.562	ENSPTRG00000020944	POLR1E	91	47.619	Pan_troglodytes
ENSGMOG00000003336	POLR1E	93	41.562	ENSPANG00000025563	POLR1E	91	47.619	Papio_anubis
ENSGMOG00000003336	POLR1E	96	47.677	ENSPKIG00000003562	polr1e	97	47.677	Paramormyrops_kingsleyae
ENSGMOG00000003336	POLR1E	92	38.931	ENSPSIG00000003274	POLR1E	90	38.931	Pelodiscus_sinensis
ENSGMOG00000003336	POLR1E	95	49.000	ENSPMGG00000024169	polr1e	96	49.000	Periophthalmus_magnuspinnatus
ENSGMOG00000003336	POLR1E	97	39.815	ENSPEMG00000019151	-	94	38.554	Peromyscus_maniculatus_bairdii
ENSGMOG00000003336	POLR1E	97	34.739	ENSPEMG00000022300	-	93	34.406	Peromyscus_maniculatus_bairdii
ENSGMOG00000003336	POLR1E	95	37.101	ENSPCIG00000014798	POLR1E	98	37.101	Phascolarctos_cinereus
ENSGMOG00000003336	POLR1E	99	51.011	ENSPFOG00000019627	polr1e	98	51.011	Poecilia_formosa
ENSGMOG00000003336	POLR1E	99	53.810	ENSPLAG00000022679	polr1e	99	53.810	Poecilia_latipinna
ENSGMOG00000003336	POLR1E	86	52.617	ENSPMEG00000022123	polr1e	92	52.617	Poecilia_mexicana
ENSGMOG00000003336	POLR1E	99	52.983	ENSPREG00000009470	polr1e	99	52.983	Poecilia_reticulata
ENSGMOG00000003336	POLR1E	93	41.310	ENSPPYG00000019061	POLR1E	93	41.058	Pongo_abelii
ENSGMOG00000003336	POLR1E	52	35.047	ENSPCAG00000004891	POLR1E	70	35.047	Procavia_capensis
ENSGMOG00000003336	POLR1E	96	40.777	ENSPCOG00000027448	POLR1E	97	40.241	Propithecus_coquereli
ENSGMOG00000003336	POLR1E	93	39.599	ENSPVAG00000007940	POLR1E	83	38.693	Pteropus_vampyrus
ENSGMOG00000003336	POLR1E	99	55.238	ENSPNYG00000001032	polr1e	98	55.238	Pundamilia_nyererei
ENSGMOG00000003336	POLR1E	99	42.959	ENSPNAG00000006987	polr1e	97	43.812	Pygocentrus_nattereri
ENSGMOG00000003336	POLR1E	93	38.945	ENSRNOG00000012664	Polr1e	90	38.945	Rattus_norvegicus
ENSGMOG00000003336	POLR1E	90	42.078	ENSRBIG00000034214	POLR1E	95	41.463	Rhinopithecus_bieti
ENSGMOG00000003336	POLR1E	93	41.310	ENSRROG00000031986	POLR1E	91	47.619	Rhinopithecus_roxellana
ENSGMOG00000003336	POLR1E	93	40.547	ENSSBOG00000021415	POLR1E	94	40.299	Saimiri_boliviensis_boliviensis
ENSGMOG00000003336	POLR1E	81	36.311	ENSSHAG00000016084	POLR1E	95	36.311	Sarcophilus_harrisii
ENSGMOG00000003336	POLR1E	100	46.118	ENSSFOG00015002293	polr1e	100	45.412	Scleropages_formosus
ENSGMOG00000003336	POLR1E	99	53.938	ENSSMAG00000011672	polr1e	92	53.938	Scophthalmus_maximus
ENSGMOG00000003336	POLR1E	99	56.429	ENSSDUG00000022279	polr1e	98	56.429	Seriola_dumerili
ENSGMOG00000003336	POLR1E	99	55.952	ENSSLDG00000024918	polr1e	98	55.952	Seriola_lalandi_dorsalis
ENSGMOG00000003336	POLR1E	57	35.745	ENSSARG00000009810	-	58	34.615	Sorex_araneus
ENSGMOG00000003336	POLR1E	96	39.078	ENSSPUG00000009499	POLR1E	97	39.078	Sphenodon_punctatus
ENSGMOG00000003336	POLR1E	98	57.108	ENSSPAG00000021240	polr1e	99	57.108	Stegastes_partitus
ENSGMOG00000003336	POLR1E	97	39.130	ENSSSCG00000005347	POLR1E	97	38.257	Sus_scrofa
ENSGMOG00000003336	POLR1E	91	35.106	ENSTGUG00000007169	POLR1E	98	35.106	Taeniopygia_guttata
ENSGMOG00000003336	POLR1E	98	52.857	ENSTRUG00000020779	polr1e	99	52.857	Takifugu_rubripes
ENSGMOG00000003336	POLR1E	98	53.477	ENSTNIG00000017812	polr1e	99	53.477	Tetraodon_nigroviridis
ENSGMOG00000003336	POLR1E	90	40.827	ENSTBEG00000013786	POLR1E	80	39.896	Tupaia_belangeri
ENSGMOG00000003336	POLR1E	93	39.552	ENSTTRG00000008294	POLR1E	84	38.653	Tursiops_truncatus
ENSGMOG00000003336	POLR1E	93	40.100	ENSUAMG00000012474	POLR1E	96	39.944	Ursus_americanus
ENSGMOG00000003336	POLR1E	93	40.100	ENSUMAG00000011496	POLR1E	94	38.903	Ursus_maritimus
ENSGMOG00000003336	POLR1E	80	36.047	ENSVPAG00000009048	POLR1E	81	34.985	Vicugna_pacos
ENSGMOG00000003336	POLR1E	93	39.646	ENSVVUG00000019954	POLR1E	94	38.442	Vulpes_vulpes
ENSGMOG00000003336	POLR1E	91	36.869	ENSXETG00000006533	polr1e	93	36.869	Xenopus_tropicalis
ENSGMOG00000003336	POLR1E	99	53.269	ENSXCOG00000013706	polr1e	99	53.269	Xiphophorus_couchianus
ENSGMOG00000003336	POLR1E	99	53.938	ENSXMAG00000012484	polr1e	99	53.938	Xiphophorus_maculatus