EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000003370 (Gene tree)
Gene ID: -
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 13875 bases
Position: chrGeneScaffold_3445:66389-80263
Accession: ZDB-GENE-040426-2159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000003597	KH_1	PF00013.29	5.1e-58	1	4
ENSGMOP00000003597	KH_1	PF00013.29	5.1e-58	2	4
ENSGMOP00000003597	KH_1	PF00013.29	5.1e-58	3	4
ENSGMOP00000003597	KH_1	PF00013.29	5.1e-58	4	4
ENSGMOP00000003597	KH_2	PF07650.17	7.7e-17	1	1
ENSGMOP00000003597	DUF1897	PF09005.10	1.2e-12	1	2
ENSGMOP00000003597	DUF1897	PF09005.10	1.2e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000003704	-	1893	-	ENSGMOP00000003597	630 (aa)	-	UPI00023F00BF

Gene Model

Click here to download ENSGMOG00000003370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000003370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000003370	fubp1	57	39.394	ENSGMOG00000011253	nova1	55	39.394
ENSGMOG00000003370	fubp1	89	43.448	ENSGMOG00000017047	-	69	52.771
ENSGMOG00000003370	fubp1	89	51.628	ENSGMOG00000002653	FUBP3	61	71.053
ENSGMOG00000003370	fubp1	96	50.711	ENSGMOG00000002166	khsrp	92	51.442

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000003370	fubp1	70	70.175	ENSG00000162613	FUBP1	100	66.667	Homo_sapiens
ENSGMOG00000003370	fubp1	99	83.886	ENSAPOG00000014845	fubp1	98	83.886	Acanthochromis_polyacanthus
ENSGMOG00000003370	fubp1	70	66.597	ENSAMEG00000007372	FUBP1	100	64.243	Ailuropoda_melanoleuca
ENSGMOG00000003370	fubp1	100	82.726	ENSACIG00000020024	fubp1	100	83.043	Amphilophus_citrinellus
ENSGMOG00000003370	fubp1	100	82.965	ENSAPEG00000012232	fubp1	100	82.808	Amphiprion_percula
ENSGMOG00000003370	fubp1	99	86.783	ENSATEG00000018619	fubp1	100	85.535	Anabas_testudineus
ENSGMOG00000003370	fubp1	65	70.602	ENSAPLG00000005965	FUBP1	100	67.105	Anas_platyrhynchos
ENSGMOG00000003370	fubp1	70	67.158	ENSACAG00000006310	FUBP1	96	60.844	Anolis_carolinensis
ENSGMOG00000003370	fubp1	99	85.103	ENSACLG00000006708	fubp1	100	83.968	Astatotilapia_calliptera
ENSGMOG00000003370	fubp1	88	80.863	ENSAMXG00000005525	fubp1	99	80.863	Astyanax_mexicanus
ENSGMOG00000003370	fubp1	70	69.956	ENSCJAG00000007062	FUBP1	100	66.513	Callithrix_jacchus
ENSGMOG00000003370	fubp1	70	69.956	ENSCAFG00000020361	FUBP1	100	66.513	Canis_familiaris
ENSGMOG00000003370	fubp1	65	71.533	ENSTSYG00000000148	FUBP1	100	66.939	Carlito_syrichta
ENSGMOG00000003370	fubp1	52	74.708	ENSCAPG00000011052	-	63	74.708	Cavia_aperea
ENSGMOG00000003370	fubp1	70	69.518	ENSCPOG00000002757	FUBP1	98	66.156	Cavia_porcellus
ENSGMOG00000003370	fubp1	88	63.571	ENSCCAG00000036537	FUBP1	63	59.827	Cebus_capucinus
ENSGMOG00000003370	fubp1	70	70.175	ENSCATG00000042126	FUBP1	100	66.667	Cercocebus_atys
ENSGMOG00000003370	fubp1	70	69.518	ENSCLAG00000005621	FUBP1	100	66.206	Chinchilla_lanigera
ENSGMOG00000003370	fubp1	70	70.175	ENSCSAG00000001402	FUBP1	100	66.667	Chlorocebus_sabaeus
ENSGMOG00000003370	fubp1	70	69.737	ENSCHOG00000008177	FUBP1	98	66.615	Choloepus_hoffmanni
ENSGMOG00000003370	fubp1	70	70.510	ENSCGRG00001007103	Fubp1	100	66.564	Cricetulus_griseus_chok1gshd
ENSGMOG00000003370	fubp1	65	70.673	ENSCGRG00000003372	Fubp1	100	66.450	Cricetulus_griseus_crigri
ENSGMOG00000003370	fubp1	100	85.446	ENSCSEG00000021412	fubp1	100	85.446	Cynoglossus_semilaevis
ENSGMOG00000003370	fubp1	99	82.416	ENSCVAG00000014487	fubp1	93	85.662	Cyprinodon_variegatus
ENSGMOG00000003370	fubp1	66	82.217	ENSDARG00000029248	fubp1	100	77.573	Danio_rerio
ENSGMOG00000003370	fubp1	82	60.494	ENSDNOG00000034565	-	87	51.042	Dasypus_novemcinctus
ENSGMOG00000003370	fubp1	70	70.510	ENSDORG00000016534	Fubp1	98	66.462	Dipodomys_ordii
ENSGMOG00000003370	fubp1	73	71.137	ENSETEG00000000948	-	58	71.875	Echinops_telfairi
ENSGMOG00000003370	fubp1	66	67.213	ENSEBUG00000016143	fubp1	61	61.194	Eptatretus_burgeri
ENSGMOG00000003370	fubp1	68	73.826	ENSEEUG00000001287	FUBP1	87	64.431	Erinaceus_europaeus
ENSGMOG00000003370	fubp1	100	81.115	ENSELUG00000007990	fubp1	100	80.805	Esox_lucius
ENSGMOG00000003370	fubp1	70	70.199	ENSFALG00000005768	FUBP1	97	67.028	Ficedula_albicollis
ENSGMOG00000003370	fubp1	70	69.298	ENSFDAG00000014210	FUBP1	98	66.154	Fukomys_damarensis
ENSGMOG00000003370	fubp1	100	83.780	ENSFHEG00000005230	fubp1	100	84.409	Fundulus_heteroclitus
ENSGMOG00000003370	fubp1	70	70.705	ENSGALG00000008939	FUBP1	100	67.643	Gallus_gallus
ENSGMOG00000003370	fubp1	100	82.508	ENSGAFG00000020972	fubp1	100	83.127	Gambusia_affinis
ENSGMOG00000003370	fubp1	100	86.072	ENSGACG00000016563	fubp1	100	86.385	Gasterosteus_aculeatus
ENSGMOG00000003370	fubp1	100	83.945	ENSHBUG00000009835	fubp1	99	85.910	Haplochromis_burtoni
ENSGMOG00000003370	fubp1	71	65.510	ENSHGLG00000002808	-	100	59.692	Heterocephalus_glaber_female
ENSGMOG00000003370	fubp1	70	69.518	ENSHGLG00000008415	-	100	66.055	Heterocephalus_glaber_female
ENSGMOG00000003370	fubp1	71	66.161	ENSHGLG00100001414	-	100	60.308	Heterocephalus_glaber_male
ENSGMOG00000003370	fubp1	70	69.518	ENSHGLG00100003417	-	100	66.055	Heterocephalus_glaber_male
ENSGMOG00000003370	fubp1	100	81.874	ENSHCOG00000000910	fubp1	100	82.362	Hippocampus_comes
ENSGMOG00000003370	fubp1	100	74.451	ENSIPUG00000009896	fubp1	100	76.489	Ictalurus_punctatus
ENSGMOG00000003370	fubp1	70	71.300	ENSSTOG00000014312	FUBP1	100	66.513	Ictidomys_tridecemlineatus
ENSGMOG00000003370	fubp1	70	70.628	ENSJJAG00000020069	Fubp1	100	65.854	Jaculus_jaculus
ENSGMOG00000003370	fubp1	100	84.906	ENSKMAG00000018897	fubp1	100	85.063	Kryptolebias_marmoratus
ENSGMOG00000003370	fubp1	99	79.762	ENSLBEG00000012700	fubp1	97	81.101	Labrus_bergylta
ENSGMOG00000003370	fubp1	98	72.440	ENSLOCG00000003745	fubp1	99	73.088	Lepisosteus_oculatus
ENSGMOG00000003370	fubp1	70	67.158	ENSLAFG00000003273	FUBP1	99	67.742	Loxodonta_africana
ENSGMOG00000003370	fubp1	70	70.175	ENSMFAG00000031825	FUBP1	100	66.667	Macaca_fascicularis
ENSGMOG00000003370	fubp1	70	71.525	ENSMMUG00000002899	FUBP1	100	66.667	Macaca_mulatta
ENSGMOG00000003370	fubp1	70	70.175	ENSMNEG00000045212	FUBP1	100	66.667	Macaca_nemestrina
ENSGMOG00000003370	fubp1	99	82.051	ENSMAMG00000007489	fubp1	99	78.932	Mastacembelus_armatus
ENSGMOG00000003370	fubp1	100	85.737	ENSMZEG00005024298	fubp1	100	86.278	Maylandia_zebra
ENSGMOG00000003370	fubp1	65	70.673	ENSMGAG00000009424	FUBP1	100	67.430	Meleagris_gallopavo
ENSGMOG00000003370	fubp1	70	70.175	ENSMAUG00000016428	Fubp1	98	66.616	Mesocricetus_auratus
ENSGMOG00000003370	fubp1	70	71.300	ENSMOCG00000014751	Fubp1	100	67.395	Microtus_ochrogaster
ENSGMOG00000003370	fubp1	87	86.654	ENSMMOG00000019463	fubp1	99	86.654	Mola_mola
ENSGMOG00000003370	fubp1	67	63.982	ENSMODG00000020804	FUBP1	100	62.031	Monodelphis_domestica
ENSGMOG00000003370	fubp1	100	84.227	ENSMALG00000015173	fubp1	100	85.016	Monopterus_albus
ENSGMOG00000003370	fubp1	70	69.912	MGP_CAROLIEiJ_G0025740	Fubp1	100	66.462	Mus_caroli
ENSGMOG00000003370	fubp1	70	69.690	ENSMUSG00000028034	Fubp1	100	66.462	Mus_musculus
ENSGMOG00000003370	fubp1	70	69.757	MGP_PahariEiJ_G0027191	Fubp1	99	67.235	Mus_pahari
ENSGMOG00000003370	fubp1	70	69.912	MGP_SPRETEiJ_G0026693	Fubp1	100	66.615	Mus_spretus
ENSGMOG00000003370	fubp1	70	66.458	ENSMLUG00000014802	FUBP1	100	63.811	Myotis_lucifugus
ENSGMOG00000003370	fubp1	70	67.406	ENSNGAG00000014302	Fubp1	100	64.407	Nannospalax_galili
ENSGMOG00000003370	fubp1	100	84.127	ENSNBRG00000015099	fubp1	100	84.127	Neolamprologus_brichardi
ENSGMOG00000003370	fubp1	70	67.686	ENSNLEG00000009772	FUBP1	100	64.931	Nomascus_leucogenys
ENSGMOG00000003370	fubp1	88	86.842	ENSOPRG00000001175	FUBP1	91	63.190	Ochotona_princeps
ENSGMOG00000003370	fubp1	70	69.518	ENSODEG00000002600	-	98	66.308	Octodon_degus
ENSGMOG00000003370	fubp1	99	50.784	ENSODEG00000003657	-	69	56.010	Octodon_degus
ENSGMOG00000003370	fubp1	99	84.591	ENSONIG00000018381	fubp1	99	85.243	Oreochromis_niloticus
ENSGMOG00000003370	fubp1	60	71.576	ENSOANG00000009777	FUBP1	99	61.501	Ornithorhynchus_anatinus
ENSGMOG00000003370	fubp1	99	82.222	ENSORLG00000003540	fubp1	99	81.775	Oryzias_latipes
ENSGMOG00000003370	fubp1	99	82.325	ENSORLG00020005908	fubp1	99	82.325	Oryzias_latipes_hni
ENSGMOG00000003370	fubp1	100	83.125	ENSORLG00015008779	fubp1	100	83.125	Oryzias_latipes_hsok
ENSGMOG00000003370	fubp1	100	82.698	ENSOMEG00000021943	fubp1	100	82.540	Oryzias_melastigma
ENSGMOG00000003370	fubp1	70	66.320	ENSOGAG00000014233	FUBP1	100	63.864	Otolemur_garnettii
ENSGMOG00000003370	fubp1	70	69.956	ENSOARG00000013259	FUBP1	100	64.000	Ovis_aries
ENSGMOG00000003370	fubp1	70	69.956	ENSPPRG00000000413	FUBP1	100	66.513	Panthera_pardus
ENSGMOG00000003370	fubp1	70	69.956	ENSPTIG00000019450	FUBP1	100	66.513	Panthera_tigris_altaica
ENSGMOG00000003370	fubp1	66	70.686	ENSPSIG00000012965	FUBP1	100	67.258	Pelodiscus_sinensis
ENSGMOG00000003370	fubp1	66	83.491	ENSPMGG00000009060	fubp1	99	78.110	Periophthalmus_magnuspinnatus
ENSGMOG00000003370	fubp1	70	70.510	ENSPEMG00000021802	Fubp1	98	66.512	Peromyscus_maniculatus_bairdii
ENSGMOG00000003370	fubp1	61	56.757	ENSPMAG00000001644	-	90	56.757	Petromyzon_marinus
ENSGMOG00000003370	fubp1	100	82.774	ENSPFOG00000000238	fubp1	100	79.610	Poecilia_formosa
ENSGMOG00000003370	fubp1	100	83.228	ENSPLAG00000021170	fubp1	100	82.780	Poecilia_latipinna
ENSGMOG00000003370	fubp1	99	85.032	ENSPMEG00000004747	fubp1	99	85.032	Poecilia_mexicana
ENSGMOG00000003370	fubp1	99	84.202	ENSPREG00000017911	fubp1	99	86.916	Poecilia_reticulata
ENSGMOG00000003370	fubp1	72	69.807	ENSPPYG00000001219	-	65	73.103	Pongo_abelii
ENSGMOG00000003370	fubp1	70	69.890	ENSPCAG00000012617	FUBP1	98	66.410	Procavia_capensis
ENSGMOG00000003370	fubp1	70	70.667	ENSPCOG00000024974	FUBP1	100	66.513	Propithecus_coquereli
ENSGMOG00000003370	fubp1	100	85.150	ENSPNYG00000004552	fubp1	100	86.278	Pundamilia_nyererei
ENSGMOG00000003370	fubp1	100	77.156	ENSPNAG00000016207	fubp1	100	80.484	Pygocentrus_nattereri
ENSGMOG00000003370	fubp1	70	69.912	ENSRNOG00000043370	Fubp1	100	66.308	Rattus_norvegicus
ENSGMOG00000003370	fubp1	70	70.175	ENSRBIG00000042950	FUBP1	100	66.667	Rhinopithecus_bieti
ENSGMOG00000003370	fubp1	70	70.175	ENSRROG00000043534	FUBP1	100	66.667	Rhinopithecus_roxellana
ENSGMOG00000003370	fubp1	70	69.956	ENSSBOG00000027299	FUBP1	98	68.529	Saimiri_boliviensis_boliviensis
ENSGMOG00000003370	fubp1	65	69.524	ENSSHAG00000005367	FUBP1	99	68.364	Sarcophilus_harrisii
ENSGMOG00000003370	fubp1	99	77.302	ENSSFOG00015010213	fubp1	99	77.727	Scleropages_formosus
ENSGMOG00000003370	fubp1	100	76.558	ENSSMAG00000012029	fubp1	98	80.861	Scophthalmus_maximus
ENSGMOG00000003370	fubp1	99	83.385	ENSSDUG00000007383	fubp1	100	81.162	Seriola_dumerili
ENSGMOG00000003370	fubp1	100	83.437	ENSSLDG00000022863	fubp1	98	84.544	Seriola_lalandi_dorsalis
ENSGMOG00000003370	fubp1	77	68.613	ENSSARG00000011730	FUBP1	69	69.004	Sorex_araneus
ENSGMOG00000003370	fubp1	99	61.136	ENSSPUG00000008389	FUBP1	100	59.942	Sphenodon_punctatus
ENSGMOG00000003370	fubp1	99	87.102	ENSSPAG00000010161	fubp1	99	86.943	Stegastes_partitus
ENSGMOG00000003370	fubp1	65	70.167	ENSTGUG00000006841	FUBP1	100	66.830	Taeniopygia_guttata
ENSGMOG00000003370	fubp1	100	77.941	ENSTRUG00000004615	fubp1	100	72.938	Takifugu_rubripes
ENSGMOG00000003370	fubp1	75	81.457	ENSTBEG00000017333	FUBP1	63	82.119	Tupaia_belangeri
ENSGMOG00000003370	fubp1	70	69.956	ENSTTRG00000000096	FUBP1	98	66.308	Tursiops_truncatus
ENSGMOG00000003370	fubp1	70	69.956	ENSVPAG00000004709	FUBP1	99	66.308	Vicugna_pacos
ENSGMOG00000003370	fubp1	100	78.549	ENSXCOG00000019354	fubp1	100	77.987	Xiphophorus_couchianus
ENSGMOG00000003370	fubp1	97	83.252	ENSXMAG00000007168	fubp1	99	87.406	Xiphophorus_maculatus