EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000003558 (Gene tree)
Gene ID: -
Gene Symbol: fam83c
Alias: im:7149063
Full Name: family with sequence similarity 83%2C member C
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 23728 bases
Position: chrGeneScaffold_1:564673-588400
Accession: ZDB-GENE-120201-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000003768	FAM83	PF07894.12	5.4e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000003882	-	975	-	ENSGMOP00000003768	325 (aa)	-	UPI00023F03E6

Gene Model

Click here to download ENSGMOG00000003558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000003558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000003558	fam83c	89	34.494	ENSGMOG00000005524	fam83b	91	36.226
ENSGMOG00000003558	fam83c	76	30.545	ENSGMOG00000006438	-	86	31.461
ENSGMOG00000003558	fam83c	76	36.330	ENSGMOG00000007616	-	90	36.330
ENSGMOG00000003558	fam83c	73	33.871	ENSGMOG00000017927	fam83d	93	33.871
ENSGMOG00000003558	fam83c	77	33.808	ENSGMOG00000006203	si:dkeyp-9d4.4	88	33.115
ENSGMOG00000003558	fam83c	58	34.211	ENSGMOG00000006094	fam83fb	88	34.211
ENSGMOG00000003558	fam83c	81	33.688	ENSGMOG00000009951	FAM83G	73	33.224
ENSGMOG00000003558	fam83c	63	32.093	ENSGMOG00000009556	fam83fa	88	30.736

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000003558	fam83c	73	78.601	ENSAPOG00000006736	fam83c	62	78.601	Acanthochromis_polyacanthus
ENSGMOG00000003558	fam83c	89	74.351	ENSACIG00000015685	fam83c	52	74.183	Amphilophus_citrinellus
ENSGMOG00000003558	fam83c	91	74.528	ENSAPEG00000023028	fam83c	55	75.563	Amphiprion_percula
ENSGMOG00000003558	fam83c	85	46.844	ENSAPLG00000007684	FAM83C	57	46.844	Anas_platyrhynchos
ENSGMOG00000003558	fam83c	86	46.535	ENSACAG00000005517	FAM83C	81	46.535	Anolis_carolinensis
ENSGMOG00000003558	fam83c	87	76.080	ENSACLG00000013293	fam83c	53	75.728	Astatotilapia_calliptera
ENSGMOG00000003558	fam83c	90	71.061	ENSAMXG00000018399	fam83c	51	71.429	Astyanax_mexicanus
ENSGMOG00000003558	fam83c	86	69.333	ENSCVAG00000010589	fam83c	51	69.333	Cyprinodon_variegatus
ENSGMOG00000003558	fam83c	90	66.019	ENSDARG00000075296	fam83c	52	66.776	Danio_rerio
ENSGMOG00000003558	fam83c	90	72.756	ENSELUG00000014439	fam83c	52	73.139	Esox_lucius
ENSGMOG00000003558	fam83c	86	46.205	ENSFALG00000012451	FAM83C	74	46.205	Ficedula_albicollis
ENSGMOG00000003558	fam83c	88	67.213	ENSFHEG00000017527	fam83c	52	67.213	Fundulus_heteroclitus
ENSGMOG00000003558	fam83c	92	73.443	ENSGACG00000000006	fam83c	85	75.862	Gasterosteus_aculeatus
ENSGMOG00000003558	fam83c	97	44.444	ENSGAGG00000011761	FAM83C	64	46.429	Gopherus_agassizii
ENSGMOG00000003558	fam83c	87	76.080	ENSHBUG00000009655	fam83c	53	75.728	Haplochromis_burtoni
ENSGMOG00000003558	fam83c	90	66.667	ENSIPUG00000002046	FAM83C	53	67.434	Ictalurus_punctatus
ENSGMOG00000003558	fam83c	88	76.393	ENSKMAG00000015504	fam83c	50	76.393	Kryptolebias_marmoratus
ENSGMOG00000003558	fam83c	92	74.608	ENSLBEG00000017799	fam83c	52	76.721	Labrus_bergylta
ENSGMOG00000003558	fam83c	88	55.700	ENSLACG00000005534	FAM83C	58	55.700	Latimeria_chalumnae
ENSGMOG00000003558	fam83c	88	66.013	ENSLOCG00000007724	fam83c	51	66.013	Lepisosteus_oculatus
ENSGMOG00000003558	fam83c	94	71.605	ENSMAMG00000010316	fam83c	50	74.013	Mastacembelus_armatus
ENSGMOG00000003558	fam83c	87	76.080	ENSMZEG00005009063	fam83c	53	75.728	Maylandia_zebra
ENSGMOG00000003558	fam83c	87	45.724	ENSMGAG00000001956	FAM83C	58	45.724	Meleagris_gallopavo
ENSGMOG00000003558	fam83c	94	73.620	ENSMALG00000020114	fam83c	50	76.547	Monopterus_albus
ENSGMOG00000003558	fam83c	87	49.342	ENSMLUG00000004473	FAM83C	57	49.342	Myotis_lucifugus
ENSGMOG00000003558	fam83c	87	74.751	ENSONIG00000018564	fam83c	60	74.434	Oreochromis_niloticus
ENSGMOG00000003558	fam83c	93	67.692	ENSORLG00000002950	fam83c	51	69.935	Oryzias_latipes
ENSGMOG00000003558	fam83c	93	67.385	ENSORLG00020001822	fam83c	51	69.608	Oryzias_latipes_hni
ENSGMOG00000003558	fam83c	93	67.692	ENSORLG00015019398	fam83c	51	69.935	Oryzias_latipes_hsok
ENSGMOG00000003558	fam83c	88	68.627	ENSOMEG00000003633	fam83c	51	68.627	Oryzias_melastigma
ENSGMOG00000003558	fam83c	91	68.454	ENSPKIG00000023250	fam83c	53	69.381	Paramormyrops_kingsleyae
ENSGMOG00000003558	fam83c	93	75.549	ENSPMGG00000003433	fam83c	54	78.146	Periophthalmus_magnuspinnatus
ENSGMOG00000003558	fam83c	88	69.180	ENSPFOG00000014676	fam83c	50	70.492	Poecilia_formosa
ENSGMOG00000003558	fam83c	88	69.180	ENSPREG00000021668	fam83c	54	70.492	Poecilia_reticulata
ENSGMOG00000003558	fam83c	87	72.727	ENSPNYG00000019386	fam83c	51	72.449	Pundamilia_nyererei
ENSGMOG00000003558	fam83c	90	71.795	ENSPNAG00000011432	fam83c	51	72.638	Pygocentrus_nattereri
ENSGMOG00000003558	fam83c	88	76.221	ENSSDUG00000017583	fam83c	56	76.144	Seriola_dumerili
ENSGMOG00000003558	fam83c	85	49.667	ENSSPUG00000012470	FAM83C	50	49.667	Sphenodon_punctatus
ENSGMOG00000003558	fam83c	92	75.625	ENSSPAG00000017752	fam83c	50	76.849	Stegastes_partitus
ENSGMOG00000003558	fam83c	88	74.754	ENSTNIG00000002833	fam83c	84	74.754	Tetraodon_nigroviridis
ENSGMOG00000003558	fam83c	88	47.573	ENSXETG00000019789	fam83c	77	48.344	Xenopus_tropicalis