EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000003561 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 5050 bases
Position: chrGeneScaffold_607:928-5977
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000003766	DEAD	PF00270.29	5.3e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000003880	-	981	-	ENSGMOP00000003766	327 (aa)	-	UPI00023F03E9

Gene Model

Click here to download ENSGMOG00000003561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000003561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000003561	-	67	32.743	ENSGMOG00000006760	zgc:193690	58	32.743
ENSGMOG00000003561	-	74	36.327	ENSGMOG00000001560	eif4a3	61	36.475
ENSGMOG00000003561	-	75	36.032	ENSGMOG00000014316	DDX39A	58	36.032
ENSGMOG00000003561	-	100	85.671	ENSGMOG00000013762	ddx61	68	85.671
ENSGMOG00000003561	-	100	76.418	ENSGMOG00000009542	ddx6	68	75.522
ENSGMOG00000003561	-	64	31.925	ENSGMOG00000010290	ddx47	55	31.925
ENSGMOG00000003561	-	72	38.397	ENSGMOG00000002930	eif4a2	58	38.397
ENSGMOG00000003561	-	75	33.871	ENSGMOG00000011287	-	58	33.871
ENSGMOG00000003561	-	72	38.397	ENSGMOG00000018350	eif4a1b	59	38.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000003561	-	100	80.000	ENSAPOG00000014829	ddx61	66	79.268	Acanthochromis_polyacanthus
ENSGMOG00000003561	-	65	96.682	ENSAPOG00000023627	-	53	96.682	Acanthochromis_polyacanthus
ENSGMOG00000003561	-	100	88.754	ENSACIG00000018355	-	71	88.073	Amphilophus_citrinellus
ENSGMOG00000003561	-	100	81.515	ENSAOCG00000007627	ddx61	66	81.098	Amphiprion_ocellaris
ENSGMOG00000003561	-	100	88.450	ENSAOCG00000006269	-	66	88.379	Amphiprion_ocellaris
ENSGMOG00000003561	-	100	88.450	ENSAPEG00000021368	-	66	88.379	Amphiprion_percula
ENSGMOG00000003561	-	100	81.515	ENSAPEG00000007293	ddx61	66	81.098	Amphiprion_percula
ENSGMOG00000003561	-	100	88.450	ENSAPEG00000020642	-	66	88.379	Amphiprion_percula
ENSGMOG00000003561	-	100	86.626	ENSATEG00000005424	-	66	85.627	Anabas_testudineus
ENSGMOG00000003561	-	100	81.707	ENSATEG00000011302	ddx61	67	81.707	Anabas_testudineus
ENSGMOG00000003561	-	100	82.229	ENSACLG00000027620	ddx61	68	82.229	Astatotilapia_calliptera
ENSGMOG00000003561	-	100	88.146	ENSACLG00000003260	-	66	87.462	Astatotilapia_calliptera
ENSGMOG00000003561	-	100	84.451	ENSAMXG00000033980	-	66	84.451	Astyanax_mexicanus
ENSGMOG00000003561	-	100	82.675	ENSAMXG00000032542	ddx61	66	82.067	Astyanax_mexicanus
ENSGMOG00000003561	-	100	89.362	ENSCSEG00000009893	-	71	87.768	Cynoglossus_semilaevis
ENSGMOG00000003561	-	100	86.850	ENSCVAG00000011006	-	66	86.239	Cyprinodon_variegatus
ENSGMOG00000003561	-	100	81.459	ENSDARG00000018425	ddx61	67	80.851	Danio_rerio
ENSGMOG00000003561	-	100	86.626	ENSELUG00000020545	ddx61	66	85.933	Esox_lucius
ENSGMOG00000003561	-	100	87.462	ENSELUG00000022538	-	66	87.462	Esox_lucius
ENSGMOG00000003561	-	100	87.156	ENSFHEG00000015487	-	71	85.714	Fundulus_heteroclitus
ENSGMOG00000003561	-	100	86.544	ENSGAFG00000015865	-	65	85.106	Gambusia_affinis
ENSGMOG00000003561	-	100	81.081	ENSGACG00000003401	ddx61	68	80.665	Gasterosteus_aculeatus
ENSGMOG00000003561	-	100	87.768	ENSGACG00000002413	-	67	87.768	Gasterosteus_aculeatus
ENSGMOG00000003561	-	100	88.146	ENSHBUG00000017033	-	71	87.462	Haplochromis_burtoni
ENSGMOG00000003561	-	100	82.530	ENSHBUG00000017832	ddx61	68	82.530	Haplochromis_burtoni
ENSGMOG00000003561	-	100	85.410	ENSHCOG00000012238	-	71	85.015	Hippocampus_comes
ENSGMOG00000003561	-	100	78.899	ENSHCOG00000008184	ddx61	66	77.676	Hippocampus_comes
ENSGMOG00000003561	-	100	78.313	ENSIPUG00000012823	DDX6	66	78.313	Ictalurus_punctatus
ENSGMOG00000003561	-	100	82.317	ENSIPUG00000008367	-	67	82.317	Ictalurus_punctatus
ENSGMOG00000003561	-	100	87.842	ENSKMAG00000007213	-	67	87.462	Kryptolebias_marmoratus
ENSGMOG00000003561	-	100	88.218	ENSLBEG00000016890	-	67	88.218	Labrus_bergylta
ENSGMOG00000003561	-	100	83.082	ENSLBEG00000001740	ddx61	67	83.082	Labrus_bergylta
ENSGMOG00000003561	-	100	78.679	ENSLACG00000015214	ddx61	68	78.078	Latimeria_chalumnae
ENSGMOG00000003561	-	74	66.667	ENSLOCG00000004352	ddx61	56	67.901	Lepisosteus_oculatus
ENSGMOG00000003561	-	100	87.273	ENSMAMG00000005559	-	66	86.585	Mastacembelus_armatus
ENSGMOG00000003561	-	100	82.979	ENSMAMG00000005321	ddx61	66	82.675	Mastacembelus_armatus
ENSGMOG00000003561	-	100	82.530	ENSMZEG00005003556	ddx61	68	82.530	Maylandia_zebra
ENSGMOG00000003561	-	100	88.146	ENSMZEG00005026268	-	66	87.462	Maylandia_zebra
ENSGMOG00000003561	-	100	73.252	ENSMMOG00000013694	-	62	74.006	Mola_mola
ENSGMOG00000003561	-	65	68.720	ENSMMOG00000008825	-	51	68.720	Mola_mola
ENSGMOG00000003561	-	100	81.818	ENSMMOG00000007415	ddx61	67	81.818	Mola_mola
ENSGMOG00000003561	-	100	85.714	ENSMALG00000013817	-	71	85.321	Monopterus_albus
ENSGMOG00000003561	-	100	77.177	ENSMALG00000013776	ddx61	71	76.807	Monopterus_albus
ENSGMOG00000003561	-	100	88.754	ENSNBRG00000015075	-	71	88.073	Neolamprologus_brichardi
ENSGMOG00000003561	-	100	82.229	ENSNBRG00000015800	ddx61	73	82.229	Neolamprologus_brichardi
ENSGMOG00000003561	-	100	88.450	ENSONIG00000013748	-	66	87.768	Oreochromis_niloticus
ENSGMOG00000003561	-	100	81.928	ENSONIG00000011418	ddx61	67	81.928	Oreochromis_niloticus
ENSGMOG00000003561	-	100	87.538	ENSORLG00000009178	-	66	86.544	Oryzias_latipes
ENSGMOG00000003561	-	100	87.538	ENSORLG00020015515	-	66	86.544	Oryzias_latipes_hni
ENSGMOG00000003561	-	100	87.538	ENSORLG00015006764	-	66	86.544	Oryzias_latipes_hsok
ENSGMOG00000003561	-	100	72.340	ENSOMEG00000022326	-	64	73.089	Oryzias_melastigma
ENSGMOG00000003561	-	100	86.322	ENSPKIG00000024264	ddx61	67	85.061	Paramormyrops_kingsleyae
ENSGMOG00000003561	-	100	85.366	ENSPMGG00000013355	-	71	85.366	Periophthalmus_magnuspinnatus
ENSGMOG00000003561	-	100	86.850	ENSPFOG00000005750	-	66	85.410	Poecilia_formosa
ENSGMOG00000003561	-	100	86.850	ENSPLAG00000000403	-	66	85.410	Poecilia_latipinna
ENSGMOG00000003561	-	100	86.850	ENSPMEG00000023737	-	71	85.410	Poecilia_mexicana
ENSGMOG00000003561	-	54	79.213	ENSPREG00000008948	-	84	76.667	Poecilia_reticulata
ENSGMOG00000003561	-	100	88.146	ENSPNYG00000003986	-	71	87.462	Pundamilia_nyererei
ENSGMOG00000003561	-	100	74.255	ENSPNYG00000015045	ddx61	70	74.255	Pundamilia_nyererei
ENSGMOG00000003561	-	100	81.763	ENSPNAG00000024072	ddx61	67	80.967	Pygocentrus_nattereri
ENSGMOG00000003561	-	100	86.280	ENSPNAG00000008742	-	66	86.280	Pygocentrus_nattereri
ENSGMOG00000003561	-	100	82.831	ENSSFOG00015021404	ddx61	66	82.927	Scleropages_formosus
ENSGMOG00000003561	-	100	88.754	ENSSMAG00000001793	-	66	88.073	Scophthalmus_maximus
ENSGMOG00000003561	-	100	80.723	ENSSMAG00000006591	ddx61	66	80.723	Scophthalmus_maximus
ENSGMOG00000003561	-	100	88.788	ENSSDUG00000007530	-	66	88.110	Seriola_dumerili
ENSGMOG00000003561	-	100	83.686	ENSSDUG00000009713	ddx61	66	82.779	Seriola_dumerili
ENSGMOG00000003561	-	100	83.939	ENSSLDG00000000132	ddx61	66	83.333	Seriola_lalandi_dorsalis
ENSGMOG00000003561	-	100	88.788	ENSSLDG00000007608	-	66	88.110	Seriola_lalandi_dorsalis
ENSGMOG00000003561	-	100	82.675	ENSSPAG00000001578	ddx61	66	81.957	Stegastes_partitus
ENSGMOG00000003561	-	100	88.754	ENSSPAG00000013878	-	66	88.073	Stegastes_partitus
ENSGMOG00000003561	-	100	85.714	ENSTRUG00000012432	-	71	85.933	Takifugu_rubripes
ENSGMOG00000003561	-	100	84.802	ENSTNIG00000003560	-	68	84.404	Tetraodon_nigroviridis
ENSGMOG00000003561	-	100	71.865	ENSXCOG00000001406	-	62	71.733	Xiphophorus_couchianus
ENSGMOG00000003561	-	100	86.850	ENSXMAG00000016090	-	65	85.410	Xiphophorus_maculatus