EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000003637 (Gene tree)
Gene ID: -
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 3529 bases
Position: chrGeneScaffold_3801:87202-90730
Accession: ZDB-GENE-050417-82
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000003862	MRP-S27	PF10037.9	3.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000003978	-	1155	-	ENSGMOP00000003862	384 (aa)	-	UPI00023F0539

Gene Model

Click here to download ENSGMOG00000003637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000003637's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000003637	ptcd2	91	50.997	ENSG00000049883	PTCD2	100	47.783	Homo_sapiens
ENSGMOG00000003637	ptcd2	99	65.013	ENSAPOG00000020682	ptcd2	99	65.013	Acanthochromis_polyacanthus
ENSGMOG00000003637	ptcd2	91	49.003	ENSAMEG00000007194	PTCD2	90	49.003	Ailuropoda_melanoleuca
ENSGMOG00000003637	ptcd2	90	58.120	ENSACIG00000002053	ptcd2	100	58.120	Amphilophus_citrinellus
ENSGMOG00000003637	ptcd2	99	64.230	ENSAOCG00000006616	ptcd2	98	64.230	Amphiprion_ocellaris
ENSGMOG00000003637	ptcd2	99	64.230	ENSAPEG00000022926	ptcd2	98	64.230	Amphiprion_percula
ENSGMOG00000003637	ptcd2	91	53.429	ENSACAG00000009747	PTCD2	89	53.429	Anolis_carolinensis
ENSGMOG00000003637	ptcd2	91	49.573	ENSANAG00000029353	PTCD2	90	49.573	Aotus_nancymaae
ENSGMOG00000003637	ptcd2	99	62.924	ENSACLG00000027742	ptcd2	98	62.924	Astatotilapia_calliptera
ENSGMOG00000003637	ptcd2	90	49.425	ENSAMXG00000029404	ptcd2	92	49.425	Astyanax_mexicanus
ENSGMOG00000003637	ptcd2	91	49.003	ENSBTAG00000014675	PTCD2	91	49.003	Bos_taurus
ENSGMOG00000003637	ptcd2	91	47.863	ENSCJAG00000016364	PTCD2	90	47.863	Callithrix_jacchus
ENSGMOG00000003637	ptcd2	91	50.712	ENSCAFG00000007982	PTCD2	82	50.712	Canis_familiaris
ENSGMOG00000003637	ptcd2	90	50.862	ENSCAFG00020019147	PTCD2	97	50.862	Canis_lupus_dingo
ENSGMOG00000003637	ptcd2	91	50.142	ENSCHIG00000017118	PTCD2	91	50.142	Capra_hircus
ENSGMOG00000003637	ptcd2	91	47.578	ENSCPOG00000040168	PTCD2	91	47.578	Cavia_porcellus
ENSGMOG00000003637	ptcd2	91	48.148	ENSCCAG00000029389	-	90	48.148	Cebus_capucinus
ENSGMOG00000003637	ptcd2	72	49.638	ENSCCAG00000021996	-	84	49.638	Cebus_capucinus
ENSGMOG00000003637	ptcd2	91	50.997	ENSCATG00000019069	PTCD2	91	50.997	Cercocebus_atys
ENSGMOG00000003637	ptcd2	91	49.288	ENSCLAG00000000072	PTCD2	91	49.288	Chinchilla_lanigera
ENSGMOG00000003637	ptcd2	91	51.282	ENSCSAG00000015623	PTCD2	91	51.282	Chlorocebus_sabaeus
ENSGMOG00000003637	ptcd2	69	53.757	ENSCHOG00000010634	PTCD2	76	53.757	Choloepus_hoffmanni
ENSGMOG00000003637	ptcd2	91	48.857	ENSCPBG00000000216	PTCD2	89	48.857	Chrysemys_picta_bellii
ENSGMOG00000003637	ptcd2	91	51.282	ENSCANG00000035636	PTCD2	90	51.282	Colobus_angolensis_palliatus
ENSGMOG00000003637	ptcd2	91	48.864	ENSCGRG00001015289	Ptcd2	77	48.864	Cricetulus_griseus_chok1gshd
ENSGMOG00000003637	ptcd2	91	48.864	ENSCGRG00000006193	Ptcd2	77	48.864	Cricetulus_griseus_crigri
ENSGMOG00000003637	ptcd2	100	60.881	ENSCVAG00000001285	ptcd2	98	60.881	Cyprinodon_variegatus
ENSGMOG00000003637	ptcd2	91	52.571	ENSDARG00000035391	ptcd2	91	52.571	Danio_rerio
ENSGMOG00000003637	ptcd2	91	49.429	ENSDNOG00000008719	PTCD2	91	49.429	Dasypus_novemcinctus
ENSGMOG00000003637	ptcd2	92	50.281	ENSDORG00000004921	Ptcd2	91	50.281	Dipodomys_ordii
ENSGMOG00000003637	ptcd2	93	44.847	ENSETEG00000016542	PTCD2	92	44.847	Echinops_telfairi
ENSGMOG00000003637	ptcd2	91	51.282	ENSEASG00005018038	PTCD2	91	51.282	Equus_asinus_asinus
ENSGMOG00000003637	ptcd2	91	51.282	ENSECAG00000007022	PTCD2	90	51.282	Equus_caballus
ENSGMOG00000003637	ptcd2	91	48.718	ENSEEUG00000014031	PTCD2	90	48.718	Erinaceus_europaeus
ENSGMOG00000003637	ptcd2	99	60.260	ENSELUG00000003584	ptcd2	99	60.260	Esox_lucius
ENSGMOG00000003637	ptcd2	82	50.000	ENSFCAG00000045432	PTCD2	74	50.000	Felis_catus
ENSGMOG00000003637	ptcd2	85	42.727	ENSFALG00000010299	PTCD2	99	42.727	Ficedula_albicollis
ENSGMOG00000003637	ptcd2	91	48.148	ENSFDAG00000018461	PTCD2	91	48.148	Fukomys_damarensis
ENSGMOG00000003637	ptcd2	90	43.966	ENSGALG00000038260	PTCD2	100	41.969	Gallus_gallus
ENSGMOG00000003637	ptcd2	91	52.286	ENSGAGG00000021952	PTCD2	89	52.286	Gopherus_agassizii
ENSGMOG00000003637	ptcd2	91	50.997	ENSGGOG00000010695	PTCD2	90	50.997	Gorilla_gorilla
ENSGMOG00000003637	ptcd2	99	62.663	ENSHBUG00000009191	ptcd2	98	62.663	Haplochromis_burtoni
ENSGMOG00000003637	ptcd2	91	50.142	ENSHGLG00000001234	PTCD2	91	50.142	Heterocephalus_glaber_female
ENSGMOG00000003637	ptcd2	91	50.142	ENSHGLG00100015419	PTCD2	91	50.142	Heterocephalus_glaber_male
ENSGMOG00000003637	ptcd2	98	61.214	ENSHCOG00000001703	ptcd2	98	61.214	Hippocampus_comes
ENSGMOG00000003637	ptcd2	93	53.168	ENSIPUG00000006080	ptcd2	98	53.562	Ictalurus_punctatus
ENSGMOG00000003637	ptcd2	91	49.432	ENSSTOG00000006596	PTCD2	91	49.432	Ictidomys_tridecemlineatus
ENSGMOG00000003637	ptcd2	91	49.292	ENSJJAG00000024388	Ptcd2	91	49.292	Jaculus_jaculus
ENSGMOG00000003637	ptcd2	98	57.368	ENSKMAG00000009329	ptcd2	99	57.368	Kryptolebias_marmoratus
ENSGMOG00000003637	ptcd2	99	61.097	ENSLBEG00000024871	ptcd2	97	61.097	Labrus_bergylta
ENSGMOG00000003637	ptcd2	99	53.788	ENSLOCG00000011122	ptcd2	99	53.788	Lepisosteus_oculatus
ENSGMOG00000003637	ptcd2	72	53.957	ENSLAFG00000004115	PTCD2	88	53.957	Loxodonta_africana
ENSGMOG00000003637	ptcd2	91	51.282	ENSMFAG00000031516	PTCD2	90	51.282	Macaca_fascicularis
ENSGMOG00000003637	ptcd2	91	50.997	ENSMNEG00000007537	PTCD2	91	50.997	Macaca_nemestrina
ENSGMOG00000003637	ptcd2	91	50.997	ENSMLEG00000031093	PTCD2	90	50.997	Mandrillus_leucophaeus
ENSGMOG00000003637	ptcd2	99	63.969	ENSMAMG00000018529	ptcd2	99	63.969	Mastacembelus_armatus
ENSGMOG00000003637	ptcd2	99	62.924	ENSMZEG00005003625	ptcd2	98	62.924	Maylandia_zebra
ENSGMOG00000003637	ptcd2	91	43.875	ENSMGAG00000005033	PTCD2	100	43.875	Meleagris_gallopavo
ENSGMOG00000003637	ptcd2	91	37.500	ENSMAUG00000020253	Ptcd2	90	37.500	Mesocricetus_auratus
ENSGMOG00000003637	ptcd2	91	48.580	ENSMICG00000004535	PTCD2	90	48.580	Microcebus_murinus
ENSGMOG00000003637	ptcd2	91	49.148	ENSMOCG00000019985	Ptcd2	92	49.148	Microtus_ochrogaster
ENSGMOG00000003637	ptcd2	91	46.591	ENSMODG00000001695	PTCD2	91	46.591	Monodelphis_domestica
ENSGMOG00000003637	ptcd2	99	67.624	ENSMALG00000022372	ptcd2	99	67.624	Monopterus_albus
ENSGMOG00000003637	ptcd2	91	49.432	MGP_CAROLIEiJ_G0018829	Ptcd2	92	49.432	Mus_caroli
ENSGMOG00000003637	ptcd2	91	48.864	ENSMUSG00000021650	Ptcd2	92	48.864	Mus_musculus
ENSGMOG00000003637	ptcd2	91	49.288	MGP_PahariEiJ_G0015904	Ptcd2	91	49.288	Mus_pahari
ENSGMOG00000003637	ptcd2	91	49.432	MGP_SPRETEiJ_G0019711	Ptcd2	92	49.432	Mus_spretus
ENSGMOG00000003637	ptcd2	91	49.858	ENSMPUG00000014401	PTCD2	91	49.858	Mustela_putorius_furo
ENSGMOG00000003637	ptcd2	91	50.427	ENSMLUG00000007374	PTCD2	90	50.427	Myotis_lucifugus
ENSGMOG00000003637	ptcd2	91	49.858	ENSNGAG00000005027	Ptcd2	91	49.858	Nannospalax_galili
ENSGMOG00000003637	ptcd2	86	59.940	ENSNBRG00000000092	-	100	59.940	Neolamprologus_brichardi
ENSGMOG00000003637	ptcd2	99	62.663	ENSNBRG00000008174	ptcd2	99	62.663	Neolamprologus_brichardi
ENSGMOG00000003637	ptcd2	91	50.571	ENSNLEG00000004516	PTCD2	89	50.571	Nomascus_leucogenys
ENSGMOG00000003637	ptcd2	59	62.048	ENSMEUG00000014012	-	62	58.659	Notamacropus_eugenii
ENSGMOG00000003637	ptcd2	91	50.427	ENSOPRG00000007290	PTCD2	90	50.427	Ochotona_princeps
ENSGMOG00000003637	ptcd2	91	52.137	ENSODEG00000016417	PTCD2	91	52.137	Octodon_degus
ENSGMOG00000003637	ptcd2	85	62.310	ENSONIG00000011269	ptcd2	96	62.310	Oreochromis_niloticus
ENSGMOG00000003637	ptcd2	91	49.288	ENSOCUG00000007970	PTCD2	91	49.288	Oryctolagus_cuniculus
ENSGMOG00000003637	ptcd2	100	60.622	ENSORLG00000003851	ptcd2	98	60.622	Oryzias_latipes
ENSGMOG00000003637	ptcd2	100	60.104	ENSORLG00020009823	ptcd2	100	60.104	Oryzias_latipes_hni
ENSGMOG00000003637	ptcd2	90	62.536	ENSORLG00015016777	ptcd2	98	62.536	Oryzias_latipes_hsok
ENSGMOG00000003637	ptcd2	100	60.622	ENSOMEG00000012396	ptcd2	93	60.622	Oryzias_melastigma
ENSGMOG00000003637	ptcd2	91	49.573	ENSOGAG00000008390	PTCD2	90	49.573	Otolemur_garnettii
ENSGMOG00000003637	ptcd2	91	50.427	ENSOARG00000005087	PTCD2	89	50.427	Ovis_aries
ENSGMOG00000003637	ptcd2	91	51.282	ENSPPAG00000028480	PTCD2	90	51.282	Pan_paniscus
ENSGMOG00000003637	ptcd2	91	50.712	ENSPTRG00000016968	PTCD2	90	50.712	Pan_troglodytes
ENSGMOG00000003637	ptcd2	90	51.149	ENSPANG00000006611	PTCD2	89	51.149	Papio_anubis
ENSGMOG00000003637	ptcd2	99	50.515	ENSPKIG00000019896	ptcd2	99	50.515	Paramormyrops_kingsleyae
ENSGMOG00000003637	ptcd2	80	51.935	ENSPSIG00000014559	PTCD2	95	51.935	Pelodiscus_sinensis
ENSGMOG00000003637	ptcd2	91	48.725	ENSPEMG00000000884	Ptcd2	91	48.725	Peromyscus_maniculatus_bairdii
ENSGMOG00000003637	ptcd2	91	49.716	ENSPCIG00000029047	PTCD2	91	49.716	Phascolarctos_cinereus
ENSGMOG00000003637	ptcd2	100	60.622	ENSPLAG00000010456	ptcd2	100	60.622	Poecilia_latipinna
ENSGMOG00000003637	ptcd2	100	60.881	ENSPREG00000021797	ptcd2	98	60.881	Poecilia_reticulata
ENSGMOG00000003637	ptcd2	91	44.444	ENSPPYG00000015543	PTCD2	88	44.444	Pongo_abelii
ENSGMOG00000003637	ptcd2	72	46.209	ENSPCAG00000006806	PTCD2	87	46.209	Procavia_capensis
ENSGMOG00000003637	ptcd2	91	49.573	ENSPVAG00000010935	PTCD2	90	49.573	Pteropus_vampyrus
ENSGMOG00000003637	ptcd2	99	62.663	ENSPNYG00000003122	ptcd2	98	62.663	Pundamilia_nyererei
ENSGMOG00000003637	ptcd2	99	57.513	ENSPNAG00000021490	ptcd2	99	57.513	Pygocentrus_nattereri
ENSGMOG00000003637	ptcd2	91	49.148	ENSRNOG00000028403	Ptcd2	92	49.148	Rattus_norvegicus
ENSGMOG00000003637	ptcd2	91	46.439	ENSRBIG00000032929	PTCD2	89	46.439	Rhinopithecus_bieti
ENSGMOG00000003637	ptcd2	91	50.997	ENSRROG00000000080	PTCD2	91	50.997	Rhinopithecus_roxellana
ENSGMOG00000003637	ptcd2	91	49.429	ENSSBOG00000018911	PTCD2	91	49.429	Saimiri_boliviensis_boliviensis
ENSGMOG00000003637	ptcd2	91	45.584	ENSSHAG00000003833	PTCD2	90	45.584	Sarcophilus_harrisii
ENSGMOG00000003637	ptcd2	99	51.429	ENSSFOG00015015415	ptcd2	99	51.429	Scleropages_formosus
ENSGMOG00000003637	ptcd2	99	58.398	ENSSMAG00000010350	ptcd2	99	58.398	Scophthalmus_maximus
ENSGMOG00000003637	ptcd2	99	65.274	ENSSDUG00000008142	ptcd2	95	65.274	Seriola_dumerili
ENSGMOG00000003637	ptcd2	99	65.013	ENSSLDG00000015284	ptcd2	99	65.013	Seriola_lalandi_dorsalis
ENSGMOG00000003637	ptcd2	53	50.980	ENSSARG00000004983	PTCD2	87	43.682	Sorex_araneus
ENSGMOG00000003637	ptcd2	91	45.014	ENSSPUG00000000176	PTCD2	87	45.014	Sphenodon_punctatus
ENSGMOG00000003637	ptcd2	99	61.155	ENSSPAG00000008591	ptcd2	97	61.155	Stegastes_partitus
ENSGMOG00000003637	ptcd2	91	50.427	ENSSSCG00000016975	PTCD2	82	50.427	Sus_scrofa
ENSGMOG00000003637	ptcd2	90	43.804	ENSTGUG00000005705	PTCD2	99	43.804	Taeniopygia_guttata
ENSGMOG00000003637	ptcd2	91	48.148	ENSTBEG00000016559	PTCD2	90	48.148	Tupaia_belangeri
ENSGMOG00000003637	ptcd2	97	48.533	ENSTTRG00000011851	PTCD2	94	48.533	Tursiops_truncatus
ENSGMOG00000003637	ptcd2	91	49.573	ENSUAMG00000007583	PTCD2	81	49.573	Ursus_americanus
ENSGMOG00000003637	ptcd2	91	49.573	ENSUMAG00000007666	PTCD2	91	49.573	Ursus_maritimus
ENSGMOG00000003637	ptcd2	91	49.003	ENSVPAG00000009597	PTCD2	89	49.003	Vicugna_pacos
ENSGMOG00000003637	ptcd2	91	50.142	ENSVVUG00000007299	-	97	44.663	Vulpes_vulpes
ENSGMOG00000003637	ptcd2	91	48.305	ENSXETG00000031652	PTCD2	92	48.305	Xenopus_tropicalis
ENSGMOG00000003637	ptcd2	100	60.622	ENSXMAG00000005940	ptcd2	91	61.082	Xiphophorus_maculatus