EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000003649 (Gene tree)
Gene ID: -
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB-binding 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 9073 bases
Position: chrGeneScaffold_1876:139420-148492
Accession: ZDB-GENE-050522-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000003889	RRM_1	PF00076.22	6.1e-30	1	2
ENSGMOP00000003889	RRM_1	PF00076.22	6.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000004007	-	2106	-	ENSGMOP00000003889	701 (aa)	-	UPI00023F0545

Gene Model

Click here to download ENSGMOG00000003649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000003649's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000003649	raver1	80	60.327	ENSG00000161847	RAVER1	82	60.327	Homo_sapiens
ENSGMOG00000003649	raver1	97	72.753	ENSAPOG00000017267	raver1	85	72.040	Acanthochromis_polyacanthus
ENSGMOG00000003649	raver1	96	49.793	ENSAMEG00000011738	RAVER1	94	50.000	Ailuropoda_melanoleuca
ENSGMOG00000003649	raver1	99	72.394	ENSAOCG00000005128	raver1	91	71.690	Amphiprion_ocellaris
ENSGMOG00000003649	raver1	99	72.587	ENSAPEG00000010854	raver1	94	71.888	Amphiprion_percula
ENSGMOG00000003649	raver1	100	70.810	ENSATEG00000021004	raver1	94	70.112	Anabas_testudineus
ENSGMOG00000003649	raver1	65	56.073	ENSACAG00000008386	-	74	55.819	Anolis_carolinensis
ENSGMOG00000003649	raver1	80	60.324	ENSANAG00000028226	RAVER1	94	51.374	Aotus_nancymaae
ENSGMOG00000003649	raver1	98	71.408	ENSACLG00000018492	raver1	92	67.098	Astatotilapia_calliptera
ENSGMOG00000003649	raver1	99	61.180	ENSAMXG00000005132	raver1	95	61.591	Astyanax_mexicanus
ENSGMOG00000003649	raver1	79	61.176	ENSBTAG00000015721	RAVER1	96	52.786	Bos_taurus
ENSGMOG00000003649	raver1	80	60.366	ENSCJAG00000005671	RAVER1	76	60.366	Callithrix_jacchus
ENSGMOG00000003649	raver1	99	50.068	ENSCAFG00000017861	RAVER1	95	51.344	Canis_familiaris
ENSGMOG00000003649	raver1	99	50.068	ENSCAFG00020024449	RAVER1	98	51.344	Canis_lupus_dingo
ENSGMOG00000003649	raver1	79	65.789	ENSCHIG00000006718	RAVER1	96	51.318	Capra_hircus
ENSGMOG00000003649	raver1	51	69.061	ENSTSYG00000027107	RAVER1	75	68.392	Carlito_syrichta
ENSGMOG00000003649	raver1	76	59.130	ENSCAPG00000002269	RAVER1	81	59.649	Cavia_aperea
ENSGMOG00000003649	raver1	81	59.192	ENSCPOG00000001008	RAVER1	98	50.672	Cavia_porcellus
ENSGMOG00000003649	raver1	80	60.569	ENSCCAG00000031723	RAVER1	77	60.569	Cebus_capucinus
ENSGMOG00000003649	raver1	75	85.417	ENSCATG00000043863	RAVER1	80	60.532	Cercocebus_atys
ENSGMOG00000003649	raver1	83	60.206	ENSCLAG00000009336	RAVER1	98	50.943	Chinchilla_lanigera
ENSGMOG00000003649	raver1	80	60.532	ENSCSAG00000007317	RAVER1	68	60.532	Chlorocebus_sabaeus
ENSGMOG00000003649	raver1	97	51.126	ENSCPBG00000005349	-	97	51.126	Chrysemys_picta_bellii
ENSGMOG00000003649	raver1	75	85.417	ENSCANG00000008337	RAVER1	80	60.532	Colobus_angolensis_palliatus
ENSGMOG00000003649	raver1	81	60.825	ENSCGRG00001013260	-	81	60.825	Cricetulus_griseus_chok1gshd
ENSGMOG00000003649	raver1	81	60.825	ENSCGRG00000015138	-	81	60.825	Cricetulus_griseus_crigri
ENSGMOG00000003649	raver1	99	67.701	ENSCSEG00000021092	raver1	93	66.996	Cynoglossus_semilaevis
ENSGMOG00000003649	raver1	100	68.443	ENSCVAG00000013971	raver1	94	67.742	Cyprinodon_variegatus
ENSGMOG00000003649	raver1	98	64.566	ENSDARG00000052617	raver1	93	63.955	Danio_rerio
ENSGMOG00000003649	raver1	57	62.353	ENSDNOG00000035742	-	61	63.529	Dasypus_novemcinctus
ENSGMOG00000003649	raver1	82	57.732	ENSDORG00000010106	-	83	54.633	Dipodomys_ordii
ENSGMOG00000003649	raver1	53	52.533	ENSETEG00000008201	-	68	52.533	Echinops_telfairi
ENSGMOG00000003649	raver1	54	68.504	ENSEASG00005010544	-	69	68.504	Equus_asinus_asinus
ENSGMOG00000003649	raver1	80	59.796	ENSECAG00000024966	RAVER1	94	50.824	Equus_caballus
ENSGMOG00000003649	raver1	100	66.898	ENSELUG00000023287	raver1	94	67.590	Esox_lucius
ENSGMOG00000003649	raver1	69	66.750	ENSFCAG00000009435	RAVER1	94	50.410	Felis_catus
ENSGMOG00000003649	raver1	74	84.000	ENSFDAG00000015113	RAVER1	80	59.216	Fukomys_damarensis
ENSGMOG00000003649	raver1	67	39.085	ENSGALG00000050608	-	51	38.636	Gallus_gallus
ENSGMOG00000003649	raver1	98	68.547	ENSGAFG00000015944	raver1	93	67.842	Gambusia_affinis
ENSGMOG00000003649	raver1	100	71.331	ENSGACG00000013818	raver1	100	71.605	Gasterosteus_aculeatus
ENSGMOG00000003649	raver1	96	52.342	ENSGAGG00000011748	-	97	52.473	Gopherus_agassizii
ENSGMOG00000003649	raver1	80	60.285	ENSGGOG00000006015	RAVER1	80	60.327	Gorilla_gorilla
ENSGMOG00000003649	raver1	97	71.203	ENSHBUG00000021210	raver1	92	67.098	Haplochromis_burtoni
ENSGMOG00000003649	raver1	80	59.465	ENSHGLG00000015460	RAVER1	80	59.412	Heterocephalus_glaber_female
ENSGMOG00000003649	raver1	80	59.465	ENSHGLG00100000812	RAVER1	80	59.412	Heterocephalus_glaber_male
ENSGMOG00000003649	raver1	99	66.667	ENSHCOG00000000449	raver1	92	66.478	Hippocampus_comes
ENSGMOG00000003649	raver1	99	64.164	ENSIPUG00000013153	raver1	94	64.448	Ictalurus_punctatus
ENSGMOG00000003649	raver1	80	60.692	ENSSTOG00000003241	RAVER1	82	60.896	Ictidomys_tridecemlineatus
ENSGMOG00000003649	raver1	83	59.208	ENSJJAG00000018219	-	80	59.449	Jaculus_jaculus
ENSGMOG00000003649	raver1	99	69.468	ENSKMAG00000017355	raver1	94	68.768	Kryptolebias_marmoratus
ENSGMOG00000003649	raver1	92	70.579	ENSLBEG00000008268	raver1	90	69.817	Labrus_bergylta
ENSGMOG00000003649	raver1	90	50.000	ENSLACG00000005809	-	99	50.285	Latimeria_chalumnae
ENSGMOG00000003649	raver1	97	58.713	ENSLOCG00000007500	raver1	94	57.923	Lepisosteus_oculatus
ENSGMOG00000003649	raver1	86	59.646	ENSLAFG00000003664	-	84	59.843	Loxodonta_africana
ENSGMOG00000003649	raver1	75	85.417	ENSMFAG00000037977	RAVER1	80	60.532	Macaca_fascicularis
ENSGMOG00000003649	raver1	80	60.532	ENSMMUG00000014897	RAVER1	80	60.532	Macaca_mulatta
ENSGMOG00000003649	raver1	75	85.417	ENSMNEG00000028390	RAVER1	80	60.532	Macaca_nemestrina
ENSGMOG00000003649	raver1	75	85.417	ENSMLEG00000041959	RAVER1	80	60.532	Mandrillus_leucophaeus
ENSGMOG00000003649	raver1	99	69.930	ENSMAMG00000012059	raver1	93	69.371	Mastacembelus_armatus
ENSGMOG00000003649	raver1	78	93.750	ENSMZEG00005019002	raver1	93	70.697	Maylandia_zebra
ENSGMOG00000003649	raver1	81	60.825	ENSMAUG00000017948	-	81	60.825	Mesocricetus_auratus
ENSGMOG00000003649	raver1	96	52.381	ENSMICG00000010326	RAVER1	96	52.833	Microcebus_murinus
ENSGMOG00000003649	raver1	81	60.825	ENSMOCG00000015553	-	98	49.665	Microtus_ochrogaster
ENSGMOG00000003649	raver1	99	71.008	ENSMMOG00000012093	raver1	94	70.308	Mola_mola
ENSGMOG00000003649	raver1	93	51.095	ENSMODG00000005584	-	85	50.946	Monodelphis_domestica
ENSGMOG00000003649	raver1	100	70.195	ENSMALG00000016569	raver1	95	70.195	Monopterus_albus
ENSGMOG00000003649	raver1	83	59.794	MGP_CAROLIEiJ_G0031860	-	81	59.794	Mus_caroli
ENSGMOG00000003649	raver1	81	60.825	ENSMUSG00000010205	Raver1	81	60.825	Mus_musculus
ENSGMOG00000003649	raver1	81	60.825	MGP_PahariEiJ_G0014726	-	98	49.344	Mus_pahari
ENSGMOG00000003649	raver1	81	60.825	MGP_SPRETEiJ_G0032984	-	81	60.825	Mus_spretus
ENSGMOG00000003649	raver1	80	60.041	ENSMPUG00000006712	RAVER1	79	60.327	Mustela_putorius_furo
ENSGMOG00000003649	raver1	80	59.756	ENSMLUG00000012328	RAVER1	81	60.040	Myotis_lucifugus
ENSGMOG00000003649	raver1	80	58.763	ENSNGAG00000001260	-	81	58.763	Nannospalax_galili
ENSGMOG00000003649	raver1	98	62.589	ENSNBRG00000010139	raver1	93	63.068	Neolamprologus_brichardi
ENSGMOG00000003649	raver1	80	60.532	ENSNLEG00000012181	RAVER1	80	60.532	Nomascus_leucogenys
ENSGMOG00000003649	raver1	77	59.060	ENSMEUG00000003281	-	84	59.060	Notamacropus_eugenii
ENSGMOG00000003649	raver1	63	84.000	ENSODEG00000016260	RAVER1	98	50.464	Octodon_degus
ENSGMOG00000003649	raver1	98	68.678	ENSONIG00000001559	raver1	100	68.678	Oreochromis_niloticus
ENSGMOG00000003649	raver1	68	57.906	ENSOCUG00000020918	RAVER1	96	50.904	Oryctolagus_cuniculus
ENSGMOG00000003649	raver1	100	67.972	ENSORLG00000005458	raver1	94	67.273	Oryzias_latipes
ENSGMOG00000003649	raver1	100	68.531	ENSORLG00020004392	raver1	94	67.832	Oryzias_latipes_hni
ENSGMOG00000003649	raver1	100	68.531	ENSORLG00015017222	raver1	94	67.832	Oryzias_latipes_hsok
ENSGMOG00000003649	raver1	93	67.066	ENSOMEG00000023956	raver1	90	67.042	Oryzias_melastigma
ENSGMOG00000003649	raver1	80	60.324	ENSOGAG00000011071	RAVER1	80	60.000	Otolemur_garnettii
ENSGMOG00000003649	raver1	75	84.000	ENSOARG00000015886	RAVER1	76	58.621	Ovis_aries
ENSGMOG00000003649	raver1	80	60.285	ENSPPAG00000002611	RAVER1	80	60.327	Pan_paniscus
ENSGMOG00000003649	raver1	80	59.509	ENSPPRG00000009912	RAVER1	94	50.410	Panthera_pardus
ENSGMOG00000003649	raver1	80	60.285	ENSPTRG00000010466	RAVER1	80	60.327	Pan_troglodytes
ENSGMOG00000003649	raver1	75	85.417	ENSPANG00000004122	RAVER1	80	60.532	Papio_anubis
ENSGMOG00000003649	raver1	81	60.825	ENSPEMG00000016411	-	98	50.268	Peromyscus_maniculatus_bairdii
ENSGMOG00000003649	raver1	96	53.693	ENSPCIG00000018695	-	96	54.261	Phascolarctos_cinereus
ENSGMOG00000003649	raver1	98	67.827	ENSPFOG00000007016	raver1	93	67.688	Poecilia_formosa
ENSGMOG00000003649	raver1	94	66.032	ENSPLAG00000020793	raver1	93	65.886	Poecilia_latipinna
ENSGMOG00000003649	raver1	98	68.927	ENSPMEG00000011220	raver1	93	68.220	Poecilia_mexicana
ENSGMOG00000003649	raver1	99	65.532	ENSPREG00000006864	raver1	93	64.965	Poecilia_reticulata
ENSGMOG00000003649	raver1	80	60.327	ENSPPYG00000010514	RAVER1	66	60.327	Pongo_abelii
ENSGMOG00000003649	raver1	80	60.612	ENSPCOG00000026605	RAVER1	79	60.612	Propithecus_coquereli
ENSGMOG00000003649	raver1	74	84.000	ENSPVAG00000003689	RAVER1	96	50.687	Pteropus_vampyrus
ENSGMOG00000003649	raver1	98	67.432	ENSPNYG00000013284	raver1	92	68.006	Pundamilia_nyererei
ENSGMOG00000003649	raver1	98	64.838	ENSPNAG00000015476	raver1	93	65.401	Pygocentrus_nattereri
ENSGMOG00000003649	raver1	81	60.825	ENSRNOG00000020710	Raver1	98	51.210	Rattus_norvegicus
ENSGMOG00000003649	raver1	80	60.532	ENSRBIG00000034702	RAVER1	82	60.532	Rhinopithecus_bieti
ENSGMOG00000003649	raver1	80	60.489	ENSRROG00000031186	RAVER1	94	52.676	Rhinopithecus_roxellana
ENSGMOG00000003649	raver1	80	60.081	ENSSBOG00000023423	RAVER1	94	52.144	Saimiri_boliviensis_boliviensis
ENSGMOG00000003649	raver1	90	53.313	ENSSHAG00000008181	-	90	53.916	Sarcophilus_harrisii
ENSGMOG00000003649	raver1	99	72.472	ENSSMAG00000004546	raver1	94	71.369	Scophthalmus_maximus
ENSGMOG00000003649	raver1	99	73.876	ENSSDUG00000021063	raver1	94	73.174	Seriola_dumerili
ENSGMOG00000003649	raver1	100	73.398	ENSSLDG00000014505	raver1	94	73.174	Seriola_lalandi_dorsalis
ENSGMOG00000003649	raver1	99	72.448	ENSSPAG00000000688	raver1	94	71.748	Stegastes_partitus
ENSGMOG00000003649	raver1	75	84.000	ENSSSCG00000013650	-	96	52.489	Sus_scrofa
ENSGMOG00000003649	raver1	99	68.785	ENSTRUG00000025641	raver1	94	68.785	Takifugu_rubripes
ENSGMOG00000003649	raver1	69	66.915	ENSTTRG00000009552	RAVER1	96	51.296	Tursiops_truncatus
ENSGMOG00000003649	raver1	96	50.621	ENSUAMG00000020385	RAVER1	94	50.820	Ursus_americanus
ENSGMOG00000003649	raver1	99	50.068	ENSVVUG00000028976	RAVER1	95	51.344	Vulpes_vulpes
ENSGMOG00000003649	raver1	67	64.567	ENSXETG00000011622	raver1	69	64.567	Xenopus_tropicalis
ENSGMOG00000003649	raver1	98	69.859	ENSXCOG00000016368	raver1	93	69.155	Xiphophorus_couchianus
ENSGMOG00000003649	raver1	98	69.958	ENSXMAG00000000217	raver1	93	69.958	Xiphophorus_maculatus