EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000003830 (Gene tree)
Gene ID: -
Gene Symbol: gpatch1
Alias: im:7135982|wu:fc11h11|wu:fj99h08
Full Name: G patch domain containing 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 17252 bases
Position: chrGeneScaffold_2863:82-17333
Accession: ZDB-GENE-040914-65
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000004101	DUF1604	PF07713.13	1e-23	1	1
ENSGMOP00000004101	G-patch	PF01585.23	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000004227	-	2220	-	ENSGMOP00000004101	740 (aa)	-	UPI00023F039C

Gene Model

Click here to download ENSGMOG00000003830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000003830's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000003830	gpatch1	95	51.044	ENSG00000076650	GPATCH1	59	75.000	Homo_sapiens
ENSGMOG00000003830	gpatch1	95	51.044	ENSAMEG00000015575	GPATCH1	75	51.095	Ailuropoda_melanoleuca
ENSGMOG00000003830	gpatch1	87	70.879	ENSAOCG00000006668	gpatch1	68	70.879	Amphiprion_ocellaris
ENSGMOG00000003830	gpatch1	88	54.771	ENSAPEG00000000026	gpatch1	80	54.724	Amphiprion_percula
ENSGMOG00000003830	gpatch1	96	64.055	ENSATEG00000014494	gpatch1	84	64.286	Anabas_testudineus
ENSGMOG00000003830	gpatch1	95	49.510	ENSAPLG00000007584	GPATCH1	85	49.510	Anas_platyrhynchos
ENSGMOG00000003830	gpatch1	98	51.860	ENSANAG00000027002	GPATCH1	83	51.860	Aotus_nancymaae
ENSGMOG00000003830	gpatch1	88	54.884	ENSACLG00000024740	gpatch1	79	54.756	Astatotilapia_calliptera
ENSGMOG00000003830	gpatch1	88	61.521	ENSAMXG00000020177	gpatch1	82	61.521	Astyanax_mexicanus
ENSGMOG00000003830	gpatch1	95	51.740	ENSBTAG00000000721	GPATCH1	75	51.740	Bos_taurus
ENSGMOG00000003830	gpatch1	98	51.628	ENSCJAG00000000684	GPATCH1	83	51.628	Callithrix_jacchus
ENSGMOG00000003830	gpatch1	95	51.508	ENSCAFG00000007457	GPATCH1	70	51.508	Canis_familiaris
ENSGMOG00000003830	gpatch1	95	51.508	ENSCAFG00020019731	GPATCH1	83	51.508	Canis_lupus_dingo
ENSGMOG00000003830	gpatch1	98	52.204	ENSCHIG00000019626	GPATCH1	77	52.256	Capra_hircus
ENSGMOG00000003830	gpatch1	84	51.621	ENSCAPG00000008827	GPATCH1	75	51.621	Cavia_aperea
ENSGMOG00000003830	gpatch1	88	51.508	ENSCPOG00000024477	GPATCH1	75	52.459	Cavia_porcellus
ENSGMOG00000003830	gpatch1	95	50.930	ENSCCAG00000024676	GPATCH1	83	50.930	Cebus_capucinus
ENSGMOG00000003830	gpatch1	95	51.276	ENSCATG00000043637	GPATCH1	59	76.316	Cercocebus_atys
ENSGMOG00000003830	gpatch1	84	51.613	ENSCLAG00000003395	-	81	51.613	Chinchilla_lanigera
ENSGMOG00000003830	gpatch1	95	49.535	ENSCSAG00000004743	GPATCH1	75	50.370	Chlorocebus_sabaeus
ENSGMOG00000003830	gpatch1	86	47.075	ENSCHOG00000012865	GPATCH1	87	42.643	Choloepus_hoffmanni
ENSGMOG00000003830	gpatch1	84	50.985	ENSCPBG00000000666	GPATCH1	90	51.613	Chrysemys_picta_bellii
ENSGMOG00000003830	gpatch1	73	34.733	ENSCING00000012518	-	74	34.733	Ciona_intestinalis
ENSGMOG00000003830	gpatch1	84	52.109	ENSCGRG00001016736	Gpatch1	73	52.109	Cricetulus_griseus_chok1gshd
ENSGMOG00000003830	gpatch1	84	41.797	ENSCGRG00000005069	Gpatch1	77	41.051	Cricetulus_griseus_crigri
ENSGMOG00000003830	gpatch1	80	48.571	ENSCSEG00000019456	-	60	80.519	Cynoglossus_semilaevis
ENSGMOG00000003830	gpatch1	88	60.000	ENSDARG00000033418	gpatch1	76	60.460	Danio_rerio
ENSGMOG00000003830	gpatch1	96	51.054	ENSDNOG00000005291	GPATCH1	93	51.054	Dasypus_novemcinctus
ENSGMOG00000003830	gpatch1	95	46.402	ENSDORG00000012546	Gpatch1	84	47.253	Dipodomys_ordii
ENSGMOG00000003830	gpatch1	75	33.787	FBgn0036386	CG8833	60	33.260	Drosophila_melanogaster
ENSGMOG00000003830	gpatch1	77	62.722	ENSETEG00000003626	GPATCH1	69	51.415	Echinops_telfairi
ENSGMOG00000003830	gpatch1	99	33.795	ENSEBUG00000011286	gpatch1	83	35.696	Eptatretus_burgeri
ENSGMOG00000003830	gpatch1	95	51.276	ENSEASG00005021162	GPATCH1	90	51.276	Equus_asinus_asinus
ENSGMOG00000003830	gpatch1	95	51.276	ENSECAG00000022743	GPATCH1	86	51.276	Equus_caballus
ENSGMOG00000003830	gpatch1	95	51.972	ENSFCAG00000014917	GPATCH1	74	51.972	Felis_catus
ENSGMOG00000003830	gpatch1	92	43.634	ENSFDAG00000003871	GPATCH1	82	46.345	Fukomys_damarensis
ENSGMOG00000003830	gpatch1	88	44.723	ENSGALG00000004839	GPATCH1	84	44.987	Gallus_gallus
ENSGMOG00000003830	gpatch1	96	52.426	ENSGACG00000017544	gpatch1	93	52.906	Gasterosteus_aculeatus
ENSGMOG00000003830	gpatch1	95	50.585	ENSGAGG00000010067	GPATCH1	89	50.585	Gopherus_agassizii
ENSGMOG00000003830	gpatch1	92	50.495	ENSGGOG00000010862	GPATCH1	79	50.495	Gorilla_gorilla
ENSGMOG00000003830	gpatch1	96	52.847	ENSHBUG00000023462	gpatch1	80	55.097	Haplochromis_burtoni
ENSGMOG00000003830	gpatch1	95	50.812	ENSHGLG00000009334	GPATCH1	80	50.812	Heterocephalus_glaber_female
ENSGMOG00000003830	gpatch1	95	50.580	ENSHGLG00100018074	GPATCH1	80	50.580	Heterocephalus_glaber_male
ENSGMOG00000003830	gpatch1	88	60.739	ENSIPUG00000014977	gpatch1	75	60.739	Ictalurus_punctatus
ENSGMOG00000003830	gpatch1	95	49.420	ENSSTOG00000003720	GPATCH1	75	50.116	Ictidomys_tridecemlineatus
ENSGMOG00000003830	gpatch1	94	51.276	ENSJJAG00000023765	Gpatch1	74	51.276	Jaculus_jaculus
ENSGMOG00000003830	gpatch1	96	51.813	ENSKMAG00000017950	gpatch1	89	63.134	Kryptolebias_marmoratus
ENSGMOG00000003830	gpatch1	99	65.376	ENSLBEG00000026527	gpatch1	72	65.604	Labrus_bergylta
ENSGMOG00000003830	gpatch1	92	46.389	ENSLACG00000008130	GPATCH1	79	48.138	Latimeria_chalumnae
ENSGMOG00000003830	gpatch1	88	51.055	ENSLOCG00000001800	gpatch1	81	50.792	Lepisosteus_oculatus
ENSGMOG00000003830	gpatch1	96	51.276	ENSLAFG00000013589	GPATCH1	78	51.972	Loxodonta_africana
ENSGMOG00000003830	gpatch1	95	51.276	ENSMFAG00000034418	GPATCH1	59	76.316	Macaca_fascicularis
ENSGMOG00000003830	gpatch1	95	51.508	ENSMMUG00000011790	GPATCH1	59	77.632	Macaca_mulatta
ENSGMOG00000003830	gpatch1	95	51.276	ENSMNEG00000045084	GPATCH1	59	76.316	Macaca_nemestrina
ENSGMOG00000003830	gpatch1	95	45.739	ENSMLEG00000043840	GPATCH1	81	45.087	Mandrillus_leucophaeus
ENSGMOG00000003830	gpatch1	88	54.756	ENSMZEG00005001926	gpatch1	80	54.756	Maylandia_zebra
ENSGMOG00000003830	gpatch1	95	43.593	ENSMGAG00000005775	GPATCH1	81	44.796	Meleagris_gallopavo
ENSGMOG00000003830	gpatch1	95	47.486	ENSMICG00000004829	GPATCH1	76	50.741	Microcebus_murinus
ENSGMOG00000003830	gpatch1	95	52.436	ENSMOCG00000000174	Gpatch1	84	52.436	Microtus_ochrogaster
ENSGMOG00000003830	gpatch1	84	53.333	ENSMMOG00000002140	gpatch1	80	53.472	Mola_mola
ENSGMOG00000003830	gpatch1	88	46.354	ENSMODG00000012226	GPATCH1	81	46.354	Monodelphis_domestica
ENSGMOG00000003830	gpatch1	96	52.668	ENSMALG00000014386	gpatch1	91	52.607	Monopterus_albus
ENSGMOG00000003830	gpatch1	99	51.972	ENSMUSG00000063808	Gpatch1	78	73.684	Mus_musculus
ENSGMOG00000003830	gpatch1	99	52.204	MGP_PahariEiJ_G0012816	Gpatch1	78	75.000	Mus_pahari
ENSGMOG00000003830	gpatch1	99	52.204	MGP_SPRETEiJ_G0030681	Gpatch1	78	75.000	Mus_spretus
ENSGMOG00000003830	gpatch1	95	51.508	ENSMPUG00000007658	GPATCH1	80	51.508	Mustela_putorius_furo
ENSGMOG00000003830	gpatch1	95	50.116	ENSMLUG00000012161	GPATCH1	75	51.095	Myotis_lucifugus
ENSGMOG00000003830	gpatch1	95	51.044	ENSNGAG00000012455	Gpatch1	76	51.044	Nannospalax_galili
ENSGMOG00000003830	gpatch1	95	51.044	ENSNLEG00000007659	GPATCH1	83	51.044	Nomascus_leucogenys
ENSGMOG00000003830	gpatch1	74	58.373	ENSMEUG00000015174	GPATCH1	63	58.373	Notamacropus_eugenii
ENSGMOG00000003830	gpatch1	94	51.276	ENSODEG00000007103	GPATCH1	79	51.756	Octodon_degus
ENSGMOG00000003830	gpatch1	98	53.129	ENSONIG00000003302	gpatch1	93	53.410	Oreochromis_niloticus
ENSGMOG00000003830	gpatch1	95	51.852	ENSOANG00000012732	GPATCH1	80	52.546	Ornithorhynchus_anatinus
ENSGMOG00000003830	gpatch1	95	52.425	ENSOCUG00000015905	GPATCH1	89	52.425	Oryctolagus_cuniculus
ENSGMOG00000003830	gpatch1	96	51.605	ENSORLG00000018706	gpatch1	89	51.138	Oryzias_latipes
ENSGMOG00000003830	gpatch1	96	61.574	ENSOMEG00000022688	gpatch1	84	62.269	Oryzias_melastigma
ENSGMOG00000003830	gpatch1	87	52.107	ENSOGAG00000004016	GPATCH1	87	52.107	Otolemur_garnettii
ENSGMOG00000003830	gpatch1	95	52.113	ENSOARG00000004365	GPATCH1	75	52.113	Ovis_aries
ENSGMOG00000003830	gpatch1	95	50.812	ENSPPAG00000020990	GPATCH1	89	50.812	Pan_paniscus
ENSGMOG00000003830	gpatch1	95	51.972	ENSPPRG00000017245	GPATCH1	74	51.972	Panthera_pardus
ENSGMOG00000003830	gpatch1	95	51.972	ENSPTIG00000019649	GPATCH1	75	51.972	Panthera_tigris_altaica
ENSGMOG00000003830	gpatch1	95	50.812	ENSPTRG00000010803	GPATCH1	89	50.812	Pan_troglodytes
ENSGMOG00000003830	gpatch1	95	51.276	ENSPANG00000012374	GPATCH1	59	76.316	Papio_anubis
ENSGMOG00000003830	gpatch1	87	58.391	ENSPKIG00000020745	gpatch1	70	58.621	Paramormyrops_kingsleyae
ENSGMOG00000003830	gpatch1	95	44.498	ENSPSIG00000013433	GPATCH1	81	47.347	Pelodiscus_sinensis
ENSGMOG00000003830	gpatch1	88	47.588	ENSPEMG00000000636	Gpatch1	81	47.313	Peromyscus_maniculatus_bairdii
ENSGMOG00000003830	gpatch1	95	43.735	ENSPCIG00000021003	GPATCH1	85	46.073	Phascolarctos_cinereus
ENSGMOG00000003830	gpatch1	96	46.707	ENSPREG00000008264	gpatch1	79	51.223	Poecilia_reticulata
ENSGMOG00000003830	gpatch1	95	49.057	ENSPPYG00000009824	GPATCH1	80	49.057	Pongo_abelii
ENSGMOG00000003830	gpatch1	97	52.732	ENSPCOG00000009674	GPATCH1	77	52.732	Propithecus_coquereli
ENSGMOG00000003830	gpatch1	81	57.143	ENSPVAG00000017767	GPATCH1	68	57.143	Pteropus_vampyrus
ENSGMOG00000003830	gpatch1	88	54.933	ENSPNYG00000018189	gpatch1	89	54.793	Pundamilia_nyererei
ENSGMOG00000003830	gpatch1	88	59.268	ENSPNAG00000013187	gpatch1	78	59.540	Pygocentrus_nattereri
ENSGMOG00000003830	gpatch1	99	52.436	ENSRNOG00000011584	Gpatch1	75	52.436	Rattus_norvegicus
ENSGMOG00000003830	gpatch1	95	47.887	ENSRBIG00000034723	GPATCH1	87	43.981	Rhinopithecus_bieti
ENSGMOG00000003830	gpatch1	95	51.044	ENSRROG00000024428	GPATCH1	83	51.044	Rhinopithecus_roxellana
ENSGMOG00000003830	gpatch1	95	51.163	ENSSBOG00000034650	GPATCH1	86	51.163	Saimiri_boliviensis_boliviensis
ENSGMOG00000003830	gpatch1	95	45.012	ENSSHAG00000016016	GPATCH1	81	46.144	Sarcophilus_harrisii
ENSGMOG00000003830	gpatch1	88	58.257	ENSSFOG00015011535	gpatch1	78	58.716	Scleropages_formosus
ENSGMOG00000003830	gpatch1	96	62.014	ENSSMAG00000002883	gpatch1	88	62.243	Scophthalmus_maximus
ENSGMOG00000003830	gpatch1	88	51.646	ENSSDUG00000007444	gpatch1	74	62.812	Seriola_dumerili
ENSGMOG00000003830	gpatch1	88	62.585	ENSSLDG00000002856	gpatch1	81	62.812	Seriola_lalandi_dorsalis
ENSGMOG00000003830	gpatch1	78	48.512	ENSSARG00000004108	GPATCH1	71	50.116	Sorex_araneus
ENSGMOG00000003830	gpatch1	95	51.044	ENSSSCG00000002865	GPATCH1	91	51.740	Sus_scrofa
ENSGMOG00000003830	gpatch1	98	49.652	ENSTGUG00000009401	GPATCH1	93	49.884	Taeniopygia_guttata
ENSGMOG00000003830	gpatch1	88	52.878	ENSTRUG00000025081	gpatch1	81	53.209	Takifugu_rubripes
ENSGMOG00000003830	gpatch1	88	52.878	ENSTRUG00000005785	-	81	53.209	Takifugu_rubripes
ENSGMOG00000003830	gpatch1	88	53.675	ENSTNIG00000002554	gpatch1	97	53.735	Tetraodon_nigroviridis
ENSGMOG00000003830	gpatch1	53	83.673	ENSTBEG00000007750	-	64	83.673	Tupaia_belangeri
ENSGMOG00000003830	gpatch1	91	48.588	ENSTTRG00000012221	GPATCH1	76	44.242	Tursiops_truncatus
ENSGMOG00000003830	gpatch1	96	51.276	ENSUMAG00000014645	GPATCH1	89	51.276	Ursus_maritimus
ENSGMOG00000003830	gpatch1	84	57.803	ENSVPAG00000010313	GPATCH1	77	57.459	Vicugna_pacos
ENSGMOG00000003830	gpatch1	94	51.740	ENSVVUG00000016572	GPATCH1	82	51.740	Vulpes_vulpes
ENSGMOG00000003830	gpatch1	98	39.792	ENSXETG00000018276	gpatch1	83	43.969	Xenopus_tropicalis