EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGMOG00000003922 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Gadus_morhua
Status
putative
Strand
Minus strand
Length
8695 bases
Position
chrGeneScaffold_581:105435-114129
Accession
ZDB-GENE-040426-2401
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGMOP00000004148RRM_1PF00076.221.7e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGMOT00000004276-858-ENSGMOP00000004148285 (aa)-UPI00023F04EA
Gene Model
Click here to download ENSGMOG00000003922's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000003922's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGMOG00000003922pabpn15756.140ENSGMOG00000001475PABPN1L6359.639
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGMOG00000003922pabpn16683.505ENSG00000100836PABPN19283.333Homo_sapiens
ENSGMOG00000003922pabpn17672.851ENSG00000258643BCL2L2-PABPN16672.851Homo_sapiens
ENSGMOG00000003922pabpn110095.439ENSAPOG00000016425pabpn110092.632Acanthochromis_polyacanthus
ENSGMOG00000003922pabpn16285.393ENSAMEG00000007048BCL2L2-PABPN19485.393Ailuropoda_melanoleuca
ENSGMOG00000003922pabpn110093.728ENSACIG00000021744pabpn110093.380Amphilophus_citrinellus
ENSGMOG00000003922pabpn17896.380ENSAOCG00000015805pabpn19596.380Amphiprion_ocellaris
ENSGMOG00000003922pabpn17896.380ENSAPEG00000009623pabpn19596.380Amphiprion_percula
ENSGMOG00000003922pabpn17896.833ENSATEG00000020531pabpn19596.833Anabas_testudineus
ENSGMOG00000003922pabpn15987.209ENSACAG00000006185-7970.293Anolis_carolinensis
ENSGMOG00000003922pabpn16584.574ENSANAG00000024513-8076.087Aotus_nancymaae
ENSGMOG00000003922pabpn110093.403ENSACLG00000016374pabpn110093.056Astatotilapia_calliptera
ENSGMOG00000003922pabpn110085.614ENSAMXG00000000452pabpn19399.394Astyanax_mexicanus
ENSGMOG00000003922pabpn16283.889ENSBTAG00000053753-6783.889Bos_taurus
ENSGMOG00000003922pabpn16584.574ENSBTAG00000006884PABPN18569.960Bos_taurus
ENSGMOG00000003922pabpn16085.632ENSBTAG00000050594-7483.871Bos_taurus
ENSGMOG00000003922pabpn15059.589WBGene00003904pabp-28655.056Caenorhabditis_elegans
ENSGMOG00000003922pabpn15481.410ENSCJAG00000004407-7881.410Callithrix_jacchus
ENSGMOG00000003922pabpn17776.471ENSCJAG00000007960-7976.471Callithrix_jacchus
ENSGMOG00000003922pabpn16683.505ENSCAFG00000011482PABPN18270.751Canis_familiaris
ENSGMOG00000003922pabpn16683.505ENSCAFG00020007298-8270.356Canis_lupus_dingo
ENSGMOG00000003922pabpn16683.505ENSCAFG00020006651-8270.356Canis_lupus_dingo
ENSGMOG00000003922pabpn16683.505ENSCHIG00000012184PABPN18270.356Capra_hircus
ENSGMOG00000003922pabpn17672.851ENSTSYG00000033996BCL2L2-PABPN18783.333Carlito_syrichta
ENSGMOG00000003922pabpn16682.990ENSCPOG00000025574PABPN16482.741Cavia_porcellus
ENSGMOG00000003922pabpn17776.471ENSCCAG00000033954BCL2L2-PABPN17976.471Cebus_capucinus
ENSGMOG00000003922pabpn17776.471ENSCATG00000038536BCL2L2-PABPN17976.471Cercocebus_atys
ENSGMOG00000003922pabpn17158.874ENSCLAG00000012423PABPN17158.696Chinchilla_lanigera
ENSGMOG00000003922pabpn16681.959ENSCSAG00000016036PABPN18269.170Chlorocebus_sabaeus
ENSGMOG00000003922pabpn16973.232ENSCHOG00000004798BCL2L2-PABPN18373.232Choloepus_hoffmanni
ENSGMOG00000003922pabpn15484.615ENSCPBG00000026060-8784.615Chrysemys_picta_bellii
ENSGMOG00000003922pabpn15668.098ENSCING00000012468-7568.452Ciona_intestinalis
ENSGMOG00000003922pabpn16572.872ENSCANG00000030980-8364.035Colobus_angolensis_palliatus
ENSGMOG00000003922pabpn17672.851ENSCANG00000009750BCL2L2-PABPN18783.333Colobus_angolensis_palliatus
ENSGMOG00000003922pabpn16682.990ENSCGRG00001019696Pabpn18782.692Cricetulus_griseus_chok1gshd
ENSGMOG00000003922pabpn15192.517ENSCGRG00000011102Pabpn19192.517Cricetulus_griseus_crigri
ENSGMOG00000003922pabpn18291.770ENSCSEG00000008774pabpn19791.031Cynoglossus_semilaevis
ENSGMOG00000003922pabpn110088.095ENSCVAG00000003152pabpn110088.776Cyprinodon_variegatus
ENSGMOG00000003922pabpn110095.088ENSDARG00000045373pabpn110096.833Danio_rerio
ENSGMOG00000003922pabpn16156.897ENSDARG00000087996pabpn1l7268.376Danio_rerio
ENSGMOG00000003922pabpn16683.505ENSDNOG00000023682PABPN18270.356Dasypus_novemcinctus
ENSGMOG00000003922pabpn16682.990ENSDORG00000028966-6482.741Dipodomys_ordii
ENSGMOG00000003922pabpn17856.140FBgn0005648Pabp28261.828Drosophila_melanogaster
ENSGMOG00000003922pabpn17672.000ENSEBUG00000002322pabpn19672.000Eptatretus_burgeri
ENSGMOG00000003922pabpn16683.505ENSEASG00005011716PABPN18370.356Equus_asinus_asinus
ENSGMOG00000003922pabpn16783.590ENSECAG00000011652PABPN18570.472Equus_caballus
ENSGMOG00000003922pabpn16879.500ENSEEUG00000012973-6979.310Erinaceus_europaeus
ENSGMOG00000003922pabpn17593.548ENSELUG00000022654pabpn19593.778Esox_lucius
ENSGMOG00000003922pabpn16683.505ENSFCAG00000031922PABPN18270.356Felis_catus
ENSGMOG00000003922pabpn15482.692ENSFDAG00000018381BCL2L2-PABPN18782.692Fukomys_damarensis
ENSGMOG00000003922pabpn17592.488ENSFHEG00000007215pabpn19590.950Fundulus_heteroclitus
ENSGMOG00000003922pabpn16184.831ENSGALG00000052930-6078.846Gallus_gallus
ENSGMOG00000003922pabpn17594.393ENSGAFG00000017099pabpn19592.793Gambusia_affinis
ENSGMOG00000003922pabpn110093.684ENSGACG00000002167pabpn110092.281Gasterosteus_aculeatus
ENSGMOG00000003922pabpn16969.192ENSGGOG00000039675-8764.783Gorilla_gorilla
ENSGMOG00000003922pabpn17776.471ENSGGOG00000022683-7976.471Gorilla_gorilla
ENSGMOG00000003922pabpn17267.117ENSGGOG00000025919-9368.794Gorilla_gorilla
ENSGMOG00000003922pabpn17895.928ENSHBUG00000019523pabpn19595.928Haplochromis_burtoni
ENSGMOG00000003922pabpn15364.935ENSHGLG00000009842-8764.935Heterocephalus_glaber_female
ENSGMOG00000003922pabpn16476.190ENSHGLG00000018588-6972.727Heterocephalus_glaber_female
ENSGMOG00000003922pabpn16682.990ENSHGLG00000002927-9292.517Heterocephalus_glaber_female
ENSGMOG00000003922pabpn17672.398ENSHGLG00100006673-9292.517Heterocephalus_glaber_male
ENSGMOG00000003922pabpn16476.190ENSHGLG00100015565-8664.435Heterocephalus_glaber_male
ENSGMOG00000003922pabpn17595.305ENSHCOG00000004655pabpn19592.308Hippocampus_comes
ENSGMOG00000003922pabpn17589.202ENSIPUG00000000180-9983.621Ictalurus_punctatus
ENSGMOG00000003922pabpn110083.276ENSIPUG00000008085PABPN19597.738Ictalurus_punctatus
ENSGMOG00000003922pabpn15483.333ENSSTOG00000029847BCL2L2-PABPN18783.333Ictidomys_tridecemlineatus
ENSGMOG00000003922pabpn15483.333ENSJJAG00000023507Gm205218783.333Jaculus_jaculus
ENSGMOG00000003922pabpn110093.706ENSKMAG00000018748pabpn110093.357Kryptolebias_marmoratus
ENSGMOG00000003922pabpn110096.140ENSLBEG00000027266pabpn110096.140Labrus_bergylta
ENSGMOG00000003922pabpn16288.827ENSLACG00000000646pabpn18582.051Latimeria_chalumnae
ENSGMOG00000003922pabpn16667.708ENSLOCG00000004694pabpn1l9363.861Lepisosteus_oculatus
ENSGMOG00000003922pabpn110091.259ENSLOCG00000000796pabpn110089.510Lepisosteus_oculatus
ENSGMOG00000003922pabpn17672.851ENSMFAG00000032183BCL2L2-PABPN18783.333Macaca_fascicularis
ENSGMOG00000003922pabpn17475.472ENSMMUG00000014747BCL2L2-PABPN19282.963Macaca_mulatta
ENSGMOG00000003922pabpn16568.617ENSMMUG00000048382-8557.812Macaca_mulatta
ENSGMOG00000003922pabpn16168.571ENSMNEG00000035750-9074.615Macaca_nemestrina
ENSGMOG00000003922pabpn17776.471ENSMNEG00000045065BCL2L2-PABPN17976.471Macaca_nemestrina
ENSGMOG00000003922pabpn15466.242ENSMLEG00000034623-9272.727Mandrillus_leucophaeus
ENSGMOG00000003922pabpn17672.851ENSMLEG00000043862BCL2L2-PABPN18783.333Mandrillus_leucophaeus
ENSGMOG00000003922pabpn110094.386ENSMAMG00000007979pabpn110091.579Mastacembelus_armatus
ENSGMOG00000003922pabpn110095.088ENSMZEG00005011904pabpn110092.632Maylandia_zebra
ENSGMOG00000003922pabpn16682.990ENSMAUG00000007383Gm205216682.741Mesocricetus_auratus
ENSGMOG00000003922pabpn17776.471ENSMICG00000010002BCL2L2-PABPN17976.471Microcebus_murinus
ENSGMOG00000003922pabpn16682.474ENSMOCG00000018557Gm205219092.517Microtus_ochrogaster
ENSGMOG00000003922pabpn110095.439ENSMMOG00000005405pabpn110092.982Mola_mola
ENSGMOG00000003922pabpn16683.505ENSMODG00000004535-8270.635Monodelphis_domestica
ENSGMOG00000003922pabpn110095.088ENSMALG00000019612pabpn110092.281Monopterus_albus
ENSGMOG00000003922pabpn17671.946MGP_CAROLIEiJ_G0019276Gm205216671.946Mus_caroli
ENSGMOG00000003922pabpn16681.959MGP_CAROLIEiJ_G0019277Pabpn19984.663Mus_caroli
ENSGMOG00000003922pabpn16682.474ENSMUSG00000022194Pabpn19984.663Mus_musculus
ENSGMOG00000003922pabpn17672.398ENSMUSG00000092232Gm205216672.398Mus_musculus
ENSGMOG00000003922pabpn17672.398MGP_PahariEiJ_G0030294Gm205216672.398Mus_pahari
ENSGMOG00000003922pabpn16682.474MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSGMOG00000003922pabpn17672.398MGP_SPRETEiJ_G0020165Gm205216672.398Mus_spretus
ENSGMOG00000003922pabpn16682.474MGP_SPRETEiJ_G0020166Pabpn19984.663Mus_spretus
ENSGMOG00000003922pabpn15483.333ENSMPUG00000006775-9283.333Mustela_putorius_furo
ENSGMOG00000003922pabpn16481.283ENSMLUG00000012452-7871.130Myotis_lucifugus
ENSGMOG00000003922pabpn16582.258ENSMLUG00000028677-7875.587Myotis_lucifugus
ENSGMOG00000003922pabpn16284.270ENSMLUG00000003800-9484.270Myotis_lucifugus
ENSGMOG00000003922pabpn17673.303ENSNGAG00000019529Gm205216673.303Nannospalax_galili
ENSGMOG00000003922pabpn110095.088ENSNBRG00000023955pabpn110092.632Neolamprologus_brichardi
ENSGMOG00000003922pabpn16669.072ENSNLEG00000030598-7269.036Nomascus_leucogenys
ENSGMOG00000003922pabpn16683.505ENSNLEG00000015007-7083.249Nomascus_leucogenys
ENSGMOG00000003922pabpn16682.990ENSODEG00000002083BCL2L2-PABPN16482.741Octodon_degus
ENSGMOG00000003922pabpn15674.847ENSODEG00000011555-8173.684Octodon_degus
ENSGMOG00000003922pabpn16673.958ENSODEG00000003739-6672.821Octodon_degus
ENSGMOG00000003922pabpn110095.088ENSONIG00000008112pabpn110092.632Oreochromis_niloticus
ENSGMOG00000003922pabpn16683.505ENSOCUG00000016174PABPN17283.249Oryctolagus_cuniculus
ENSGMOG00000003922pabpn110094.035ENSORLG00000027900pabpn110091.579Oryzias_latipes
ENSGMOG00000003922pabpn110091.468ENSORLG00020004681pabpn110089.078Oryzias_latipes_hni
ENSGMOG00000003922pabpn110091.468ENSORLG00015000018pabpn110089.078Oryzias_latipes_hsok
ENSGMOG00000003922pabpn110094.737ENSOMEG00000016618pabpn110091.930Oryzias_melastigma
ENSGMOG00000003922pabpn16683.505ENSOGAG00000008710PABPN18270.356Otolemur_garnettii
ENSGMOG00000003922pabpn17672.851ENSOARG00000019336BCL2L2-PABPN16172.851Ovis_aries
ENSGMOG00000003922pabpn15567.308ENSPPAG00000039421-8767.308Pan_paniscus
ENSGMOG00000003922pabpn17672.851ENSPPAG00000028984BCL2L2-PABPN19283.333Pan_paniscus
ENSGMOG00000003922pabpn16683.505ENSPPRG00000010567PABPN18270.356Panthera_pardus
ENSGMOG00000003922pabpn15483.333ENSPTIG00000001063BCL2L2-PABPN18783.333Panthera_tigris_altaica
ENSGMOG00000003922pabpn17776.471ENSPTRG00000006167BCL2L27976.471Pan_troglodytes
ENSGMOG00000003922pabpn17862.054ENSPTRG00000047273-8959.504Pan_troglodytes
ENSGMOG00000003922pabpn16569.149ENSPANG00000023326-9075.385Papio_anubis
ENSGMOG00000003922pabpn17776.471ENSPANG00000021100BCL2L2-PABPN17976.471Papio_anubis
ENSGMOG00000003922pabpn15869.880ENSPKIG00000008340pabpn1l7472.483Paramormyrops_kingsleyae
ENSGMOG00000003922pabpn110090.559ENSPKIG00000018052pabpn19595.928Paramormyrops_kingsleyae
ENSGMOG00000003922pabpn110094.386ENSPKIG00000008144-10091.930Paramormyrops_kingsleyae
ENSGMOG00000003922pabpn110090.877ENSPMGG00000022027pabpn110088.070Periophthalmus_magnuspinnatus
ENSGMOG00000003922pabpn16682.990ENSPEMG00000008332Gm205218992.517Peromyscus_maniculatus_bairdii
ENSGMOG00000003922pabpn16476.216ENSPMAG00000006212pabpn19469.298Petromyzon_marinus
ENSGMOG00000003922pabpn16683.505ENSPCIG00000027751-8270.635Phascolarctos_cinereus
ENSGMOG00000003922pabpn110088.776ENSPFOG00000010351pabpn110089.456Poecilia_formosa
ENSGMOG00000003922pabpn110093.706ENSPLAG00000022696pabpn110092.308Poecilia_latipinna
ENSGMOG00000003922pabpn17590.654ENSPMEG00000020856pabpn19591.892Poecilia_mexicana
ENSGMOG00000003922pabpn110091.608ENSPREG00000011278pabpn110092.308Poecilia_reticulata
ENSGMOG00000003922pabpn16683.505ENSPPYG00000005663PABPN18970.635Pongo_abelii
ENSGMOG00000003922pabpn16569.792ENSPCAG00000005902PABPN18559.761Procavia_capensis
ENSGMOG00000003922pabpn17776.471ENSPCOG00000028047BCL2L2-PABPN17976.471Propithecus_coquereli
ENSGMOG00000003922pabpn16781.726ENSPVAG00000005270PABPN18269.444Pteropus_vampyrus
ENSGMOG00000003922pabpn17895.928ENSPNYG00000013182pabpn19595.928Pundamilia_nyererei
ENSGMOG00000003922pabpn15570.886ENSPNAG00000021666pabpn1l8170.732Pygocentrus_nattereri
ENSGMOG00000003922pabpn110094.386ENSPNAG00000023526pabpn19597.285Pygocentrus_nattereri
ENSGMOG00000003922pabpn16682.990ENSRNOG00000042195Pabpn16582.741Rattus_norvegicus
ENSGMOG00000003922pabpn16475.936ENSRBIG00000042811-8771.707Rhinopithecus_bieti
ENSGMOG00000003922pabpn16972.000ENSRBIG00000039547-7866.038Rhinopithecus_bieti
ENSGMOG00000003922pabpn17672.851ENSRBIG00000040762BCL2L2-PABPN16872.851Rhinopithecus_bieti
ENSGMOG00000003922pabpn17672.851ENSRROG00000045535BCL2L2-PABPN18783.333Rhinopithecus_roxellana
ENSGMOG00000003922pabpn16768.657ENSRROG00000036409-6168.657Rhinopithecus_roxellana
ENSGMOG00000003922pabpn16772.308ENSRROG00000040409-7866.038Rhinopithecus_roxellana
ENSGMOG00000003922pabpn17668.803ENSSBOG00000026930BCL2L2-PABPN19283.333Saimiri_boliviensis_boliviensis
ENSGMOG00000003922pabpn16285.393ENSSHAG00000014841-8185.393Sarcophilus_harrisii
ENSGMOG00000003922pabpn17760.177ENSSHAG00000007707-9460.177Sarcophilus_harrisii
ENSGMOG00000003922pabpn110088.811ENSSFOG00015012565pabpn110086.014Scleropages_formosus
ENSGMOG00000003922pabpn16565.217ENSSFOG00015015833pabpn1l8464.674Scleropages_formosus
ENSGMOG00000003922pabpn17895.928ENSSFOG00015014718pabpn19595.928Scleropages_formosus
ENSGMOG00000003922pabpn110095.439ENSSMAG00000020157pabpn110092.632Scophthalmus_maximus
ENSGMOG00000003922pabpn110095.439ENSSDUG00000020582pabpn110092.632Seriola_dumerili
ENSGMOG00000003922pabpn17896.833ENSSLDG00000007118pabpn19596.833Seriola_lalandi_dorsalis
ENSGMOG00000003922pabpn15186.986ENSSPUG00000018308-8785.256Sphenodon_punctatus
ENSGMOG00000003922pabpn110094.386ENSSPAG00000021658pabpn110094.386Stegastes_partitus
ENSGMOG00000003922pabpn16683.505ENSSSCG00000002023PABPN18370.356Sus_scrofa
ENSGMOG00000003922pabpn16866.837ENSSSCG00000034805-7562.434Sus_scrofa
ENSGMOG00000003922pabpn110094.035ENSTRUG00000023664pabpn110091.228Takifugu_rubripes
ENSGMOG00000003922pabpn17195.522ENSTNIG00000005369pabpn19391.542Tetraodon_nigroviridis
ENSGMOG00000003922pabpn16683.505ENSUAMG00000024460PABPN16483.249Ursus_americanus
ENSGMOG00000003922pabpn17672.851ENSUMAG00000014288BCL2L2-PABPN16672.851Ursus_maritimus
ENSGMOG00000003922pabpn17672.851ENSVVUG00000019912BCL2L2-PABPN17283.696Vulpes_vulpes
ENSGMOG00000003922pabpn16485.405ENSXETG00000014597pabpn17080.095Xenopus_tropicalis
ENSGMOG00000003922pabpn15686.250ENSXCOG00000005158pabpn19186.250Xiphophorus_couchianus
ENSGMOG00000003922pabpn110089.456ENSXMAG00000006196pabpn110090.136Xiphophorus_maculatus

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