EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000003967 (Gene tree)
Gene ID: -
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 29697 bases
Position: chrGeneScaffold_482:18851-48547
Accession: ZDB-GENE-030131-378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000004267	DZF	PF07528.14	6.7e-63	1	1
ENSGMOP00000004267	zf-met	PF12874.7	1.6e-16	1	2
ENSGMOP00000004267	zf-met	PF12874.7	1.6e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000004398	-	3135	-	ENSGMOP00000004267	1045 (aa)	-	UPI00023F002B

Gene Model

Click here to download ENSGMOG00000003967's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000003967's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000003967	zfr	87	65.455	ENSGMOG00000013588	zfr2	94	65.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000003967	zfr	94	82.432	ENSG00000056097	ZFR	94	83.750	Homo_sapiens
ENSGMOG00000003967	zfr	93	91.935	ENSAPOG00000009740	zfr	94	93.243	Acanthochromis_polyacanthus
ENSGMOG00000003967	zfr	94	82.432	ENSAMEG00000006184	ZFR	94	83.750	Ailuropoda_melanoleuca
ENSGMOG00000003967	zfr	86	90.323	ENSACIG00000015926	zfr	94	91.892	Amphilophus_citrinellus
ENSGMOG00000003967	zfr	93	91.935	ENSAOCG00000013876	zfr	94	93.243	Amphiprion_ocellaris
ENSGMOG00000003967	zfr	93	91.935	ENSAPEG00000024383	zfr	95	93.243	Amphiprion_percula
ENSGMOG00000003967	zfr	93	88.710	ENSATEG00000010271	zfr	94	90.541	Anabas_testudineus
ENSGMOG00000003967	zfr	72	86.207	ENSAPLG00000015627	-	93	85.714	Anas_platyrhynchos
ENSGMOG00000003967	zfr	94	88.571	ENSACAG00000007880	ZFR	94	88.158	Anolis_carolinensis
ENSGMOG00000003967	zfr	94	82.432	ENSANAG00000023333	ZFR	94	83.750	Aotus_nancymaae
ENSGMOG00000003967	zfr	86	90.323	ENSACLG00000016832	zfr	94	91.892	Astatotilapia_calliptera
ENSGMOG00000003967	zfr	91	90.000	ENSAMXG00000019511	zfr	100	71.523	Astyanax_mexicanus
ENSGMOG00000003967	zfr	94	82.432	ENSBTAG00000008414	ZFR	94	83.750	Bos_taurus
ENSGMOG00000003967	zfr	94	82.432	ENSCJAG00000018740	ZFR	94	83.750	Callithrix_jacchus
ENSGMOG00000003967	zfr	94	78.667	ENSCAFG00000018886	ZFR	94	80.247	Canis_familiaris
ENSGMOG00000003967	zfr	94	82.432	ENSCAFG00020016859	-	94	83.750	Canis_lupus_dingo
ENSGMOG00000003967	zfr	94	82.432	ENSCHIG00000007710	ZFR	94	83.750	Capra_hircus
ENSGMOG00000003967	zfr	90	77.419	ENSTSYG00000010670	ZFR	93	85.294	Carlito_syrichta
ENSGMOG00000003967	zfr	86	86.667	ENSCAPG00000015655	ZFR	92	86.111	Cavia_aperea
ENSGMOG00000003967	zfr	83	85.714	ENSCPOG00000000862	ZFR	94	85.294	Cavia_porcellus
ENSGMOG00000003967	zfr	94	82.432	ENSCCAG00000024473	ZFR	94	83.750	Cebus_capucinus
ENSGMOG00000003967	zfr	94	82.432	ENSCATG00000038311	ZFR	94	83.750	Cercocebus_atys
ENSGMOG00000003967	zfr	90	85.714	ENSCLAG00000007408	ZFR	94	85.294	Chinchilla_lanigera
ENSGMOG00000003967	zfr	94	82.432	ENSCSAG00000017180	ZFR	94	83.750	Chlorocebus_sabaeus
ENSGMOG00000003967	zfr	84	85.294	ENSCHOG00000003848	ZFR	89	85.294	Choloepus_hoffmanni
ENSGMOG00000003967	zfr	94	89.855	ENSCPBG00000024211	ZFR	94	89.333	Chrysemys_picta_bellii
ENSGMOG00000003967	zfr	94	82.432	ENSCANG00000017807	ZFR	94	83.750	Colobus_angolensis_palliatus
ENSGMOG00000003967	zfr	94	82.432	ENSCGRG00001016009	Zfr	94	83.750	Cricetulus_griseus_chok1gshd
ENSGMOG00000003967	zfr	91	69.863	ENSCGRG00000001228	Zfr	93	70.833	Cricetulus_griseus_crigri
ENSGMOG00000003967	zfr	94	88.235	ENSCSEG00000011169	ZFR	94	89.189	Cynoglossus_semilaevis
ENSGMOG00000003967	zfr	87	88.235	ENSCSEG00000009224	zfr	94	89.189	Cynoglossus_semilaevis
ENSGMOG00000003967	zfr	91	90.000	ENSCVAG00000016494	zfr	99	72.512	Cyprinodon_variegatus
ENSGMOG00000003967	zfr	93	90.323	ENSDARG00000027109	zfr	94	91.892	Danio_rerio
ENSGMOG00000003967	zfr	94	82.432	ENSDNOG00000008852	ZFR	94	83.750	Dasypus_novemcinctus
ENSGMOG00000003967	zfr	94	82.432	ENSDORG00000016643	Zfr	94	83.750	Dipodomys_ordii
ENSGMOG00000003967	zfr	94	84.286	ENSETEG00000008937	ZFR	94	84.211	Echinops_telfairi
ENSGMOG00000003967	zfr	94	81.081	ENSEASG00005007104	ZFR	94	82.500	Equus_asinus_asinus
ENSGMOG00000003967	zfr	76	82.432	ENSECAG00000012851	ZFR	93	83.750	Equus_caballus
ENSGMOG00000003967	zfr	78	82.432	ENSEEUG00000014206	ZFR	82	70.982	Erinaceus_europaeus
ENSGMOG00000003967	zfr	94	82.432	ENSFCAG00000000354	ZFR	94	83.750	Felis_catus
ENSGMOG00000003967	zfr	94	89.855	ENSFALG00000002149	ZFR	100	67.470	Ficedula_albicollis
ENSGMOG00000003967	zfr	93	78.689	ENSFDAG00000012993	ZFR	94	80.597	Fukomys_damarensis
ENSGMOG00000003967	zfr	57	74.050	ENSFHEG00000012064	zfr	94	72.964	Fundulus_heteroclitus
ENSGMOG00000003967	zfr	94	89.855	ENSGALG00000034488	-	94	89.333	Gallus_gallus
ENSGMOG00000003967	zfr	94	89.855	ENSGALG00000003235	-	94	89.333	Gallus_gallus
ENSGMOG00000003967	zfr	76	91.935	ENSGAFG00000016229	zfr	90	93.243	Gambusia_affinis
ENSGMOG00000003967	zfr	92	91.935	ENSGACG00000005045	zfr	100	70.647	Gasterosteus_aculeatus
ENSGMOG00000003967	zfr	88	89.855	ENSGAGG00000013544	ZFR	93	89.333	Gopherus_agassizii
ENSGMOG00000003967	zfr	94	82.432	ENSGGOG00000016302	ZFR	94	83.750	Gorilla_gorilla
ENSGMOG00000003967	zfr	94	82.432	ENSHGLG00000008088	ZFR	100	66.421	Heterocephalus_glaber_female
ENSGMOG00000003967	zfr	90	85.714	ENSHGLG00100016776	ZFR	99	65.706	Heterocephalus_glaber_male
ENSGMOG00000003967	zfr	93	91.935	ENSHCOG00000001548	zfr	94	93.243	Hippocampus_comes
ENSGMOG00000003967	zfr	93	90.625	ENSIPUG00000008192	zfr	94	92.000	Ictalurus_punctatus
ENSGMOG00000003967	zfr	94	82.353	ENSSTOG00000008742	ZFR	100	66.420	Ictidomys_tridecemlineatus
ENSGMOG00000003967	zfr	94	66.243	ENSJJAG00000023064	Zfr	93	65.714	Jaculus_jaculus
ENSGMOG00000003967	zfr	84	91.935	ENSKMAG00000009468	zfr	93	93.243	Kryptolebias_marmoratus
ENSGMOG00000003967	zfr	93	91.935	ENSLBEG00000010783	zfr	94	93.243	Labrus_bergylta
ENSGMOG00000003967	zfr	93	76.812	ENSLACG00000000831	ZFR	94	77.778	Latimeria_chalumnae
ENSGMOG00000003967	zfr	94	91.176	ENSLOCG00000006727	zfr	95	90.541	Lepisosteus_oculatus
ENSGMOG00000003967	zfr	90	83.871	ENSLAFG00000002308	ZFR	94	83.784	Loxodonta_africana
ENSGMOG00000003967	zfr	90	83.871	ENSMFAG00000042691	ZFR	92	83.784	Macaca_fascicularis
ENSGMOG00000003967	zfr	94	82.432	ENSMMUG00000001317	ZFR	94	83.750	Macaca_mulatta
ENSGMOG00000003967	zfr	94	82.432	ENSMNEG00000029441	ZFR	94	83.750	Macaca_nemestrina
ENSGMOG00000003967	zfr	90	83.871	ENSMLEG00000028503	ZFR	94	83.784	Mandrillus_leucophaeus
ENSGMOG00000003967	zfr	93	91.935	ENSMAMG00000017351	zfr	94	93.243	Mastacembelus_armatus
ENSGMOG00000003967	zfr	86	90.323	ENSMZEG00005021243	zfr	94	91.892	Maylandia_zebra
ENSGMOG00000003967	zfr	90	86.667	ENSMGAG00000002841	ZFR	75	86.111	Meleagris_gallopavo
ENSGMOG00000003967	zfr	94	82.432	ENSMAUG00000000976	Zfr	94	83.750	Mesocricetus_auratus
ENSGMOG00000003967	zfr	94	81.081	ENSMICG00000001244	ZFR	94	82.500	Microcebus_murinus
ENSGMOG00000003967	zfr	94	82.432	ENSMOCG00000018630	Zfr	94	83.750	Microtus_ochrogaster
ENSGMOG00000003967	zfr	94	93.243	ENSMMOG00000012585	zfr	97	93.243	Mola_mola
ENSGMOG00000003967	zfr	94	82.432	ENSMODG00000020412	ZFR	94	83.750	Monodelphis_domestica
ENSGMOG00000003967	zfr	100	76.164	ENSMALG00000007123	zfr	95	86.486	Monopterus_albus
ENSGMOG00000003967	zfr	94	82.432	MGP_CAROLIEiJ_G0019681	Zfr	94	83.750	Mus_caroli
ENSGMOG00000003967	zfr	94	82.432	ENSMUSG00000022201	Zfr	94	83.750	Mus_musculus
ENSGMOG00000003967	zfr	94	82.432	MGP_PahariEiJ_G0016057	Zfr	94	83.750	Mus_pahari
ENSGMOG00000003967	zfr	94	82.432	MGP_SPRETEiJ_G0020574	Zfr	94	83.750	Mus_spretus
ENSGMOG00000003967	zfr	65	82.432	ENSMPUG00000015193	-	89	83.750	Mustela_putorius_furo
ENSGMOG00000003967	zfr	91	79.412	ENSMLUG00000011797	ZFR	94	86.486	Myotis_lucifugus
ENSGMOG00000003967	zfr	94	82.432	ENSNGAG00000018328	Zfr	94	83.750	Nannospalax_galili
ENSGMOG00000003967	zfr	86	90.323	ENSNBRG00000008378	zfr	94	91.892	Neolamprologus_brichardi
ENSGMOG00000003967	zfr	90	83.871	ENSNLEG00000014098	ZFR	94	83.784	Nomascus_leucogenys
ENSGMOG00000003967	zfr	90	85.714	ENSMEUG00000010225	ZFR	94	85.294	Notamacropus_eugenii
ENSGMOG00000003967	zfr	76	76.000	ENSOPRG00000016756	ZFR	78	77.500	Ochotona_princeps
ENSGMOG00000003967	zfr	90	85.714	ENSODEG00000001990	ZFR	94	85.294	Octodon_degus
ENSGMOG00000003967	zfr	93	90.323	ENSONIG00000013960	zfr	66	91.892	Oreochromis_niloticus
ENSGMOG00000003967	zfr	90	86.207	ENSOANG00000014434	ZFR	93	85.714	Ornithorhynchus_anatinus
ENSGMOG00000003967	zfr	94	82.432	ENSOCUG00000016737	ZFR	94	83.750	Oryctolagus_cuniculus
ENSGMOG00000003967	zfr	93	90.323	ENSORLG00000017243	zfr	94	91.892	Oryzias_latipes
ENSGMOG00000003967	zfr	93	90.323	ENSORLG00020014823	zfr	94	91.892	Oryzias_latipes_hni
ENSGMOG00000003967	zfr	93	90.323	ENSORLG00015005801	zfr	94	91.892	Oryzias_latipes_hsok
ENSGMOG00000003967	zfr	93	90.323	ENSOMEG00000003336	zfr	94	91.892	Oryzias_melastigma
ENSGMOG00000003967	zfr	94	82.432	ENSOGAG00000015117	ZFR	94	83.750	Otolemur_garnettii
ENSGMOG00000003967	zfr	87	70.335	ENSOARG00000012233	ZFR	94	86.207	Ovis_aries
ENSGMOG00000003967	zfr	90	80.000	ENSPPAG00000027447	ZFR	94	80.556	Pan_paniscus
ENSGMOG00000003967	zfr	94	82.432	ENSPPRG00000008253	ZFR	94	83.750	Panthera_pardus
ENSGMOG00000003967	zfr	94	69.937	ENSPTIG00000010038	ZFR	99	64.690	Panthera_tigris_altaica
ENSGMOG00000003967	zfr	94	82.432	ENSPTRG00000016771	ZFR	94	83.750	Pan_troglodytes
ENSGMOG00000003967	zfr	94	69.652	ENSPANG00000003729	ZFR	100	64.949	Papio_anubis
ENSGMOG00000003967	zfr	93	88.710	ENSPKIG00000007596	ZFR	95	89.189	Paramormyrops_kingsleyae
ENSGMOG00000003967	zfr	93	85.938	ENSPKIG00000016781	ZFR	94	88.000	Paramormyrops_kingsleyae
ENSGMOG00000003967	zfr	50	78.707	ENSPSIG00000005779	ZFR	94	79.658	Pelodiscus_sinensis
ENSGMOG00000003967	zfr	88	91.935	ENSPMGG00000015984	zfr	94	93.243	Periophthalmus_magnuspinnatus
ENSGMOG00000003967	zfr	90	82.432	ENSPEMG00000014573	Zfr	98	65.043	Peromyscus_maniculatus_bairdii
ENSGMOG00000003967	zfr	94	82.432	ENSPCIG00000020906	ZFR	94	83.750	Phascolarctos_cinereus
ENSGMOG00000003967	zfr	93	91.935	ENSPFOG00000005931	zfr	95	93.243	Poecilia_formosa
ENSGMOG00000003967	zfr	93	91.935	ENSPREG00000011947	zfr	94	93.243	Poecilia_reticulata
ENSGMOG00000003967	zfr	90	83.871	ENSPPYG00000015378	ZFR	94	83.784	Pongo_abelii
ENSGMOG00000003967	zfr	94	82.432	ENSPCAG00000007277	ZFR	94	83.750	Procavia_capensis
ENSGMOG00000003967	zfr	89	82.432	ENSPCOG00000000045	ZFR	99	66.021	Propithecus_coquereli
ENSGMOG00000003967	zfr	88	82.432	ENSPVAG00000004780	ZFR	88	83.750	Pteropus_vampyrus
ENSGMOG00000003967	zfr	86	90.323	ENSPNYG00000006239	zfr	94	91.892	Pundamilia_nyererei
ENSGMOG00000003967	zfr	93	91.935	ENSPNAG00000025151	zfr	94	91.892	Pygocentrus_nattereri
ENSGMOG00000003967	zfr	94	82.432	ENSRNOG00000011627	Zfr	100	79.070	Rattus_norvegicus
ENSGMOG00000003967	zfr	94	82.432	ENSRBIG00000041561	ZFR	94	83.750	Rhinopithecus_bieti
ENSGMOG00000003967	zfr	94	82.432	ENSRROG00000044008	ZFR	94	83.750	Rhinopithecus_roxellana
ENSGMOG00000003967	zfr	90	85.714	ENSSBOG00000024150	ZFR	93	85.294	Saimiri_boliviensis_boliviensis
ENSGMOG00000003967	zfr	90	83.333	ENSSHAG00000015478	ZFR	94	83.333	Sarcophilus_harrisii
ENSGMOG00000003967	zfr	93	87.931	ENSSFOG00015017300	ZFR	92	87.931	Scleropages_formosus
ENSGMOG00000003967	zfr	93	88.710	ENSSMAG00000000320	zfr	95	90.541	Scophthalmus_maximus
ENSGMOG00000003967	zfr	93	91.935	ENSSDUG00000013882	zfr	95	93.243	Seriola_dumerili
ENSGMOG00000003967	zfr	86	91.935	ENSSLDG00000000762	zfr	94	93.243	Seriola_lalandi_dorsalis
ENSGMOG00000003967	zfr	82	85.714	ENSSARG00000006571	ZFR	92	76.682	Sorex_araneus
ENSGMOG00000003967	zfr	90	85.714	ENSSPUG00000016786	ZFR	94	85.294	Sphenodon_punctatus
ENSGMOG00000003967	zfr	93	91.935	ENSSPAG00000019293	zfr	95	93.243	Stegastes_partitus
ENSGMOG00000003967	zfr	94	82.432	ENSSSCG00000027681	ZFR	94	83.750	Sus_scrofa
ENSGMOG00000003967	zfr	93	80.645	ENSTGUG00000001909	ZFR	100	67.409	Taeniopygia_guttata
ENSGMOG00000003967	zfr	93	90.323	ENSTRUG00000016620	zfr	94	91.892	Takifugu_rubripes
ENSGMOG00000003967	zfr	57	73.641	ENSTNIG00000018856	zfr	95	74.093	Tetraodon_nigroviridis
ENSGMOG00000003967	zfr	82	70.833	ENSTBEG00000017687	ZFR	89	65.292	Tupaia_belangeri
ENSGMOG00000003967	zfr	94	68.421	ENSTTRG00000017321	ZFR	94	67.865	Tursiops_truncatus
ENSGMOG00000003967	zfr	72	83.871	ENSUAMG00000000172	-	92	86.111	Ursus_americanus
ENSGMOG00000003967	zfr	72	83.871	ENSUMAG00000013805	-	93	86.111	Ursus_maritimus
ENSGMOG00000003967	zfr	94	70.632	ENSVPAG00000011011	ZFR	94	69.979	Vicugna_pacos
ENSGMOG00000003967	zfr	94	82.432	ENSVVUG00000022171	-	94	83.750	Vulpes_vulpes
ENSGMOG00000003967	zfr	94	92.647	ENSXETG00000015598	zfr	100	64.239	Xenopus_tropicalis
ENSGMOG00000003967	zfr	93	91.935	ENSXCOG00000009361	zfr	95	93.243	Xiphophorus_couchianus
ENSGMOG00000003967	zfr	93	91.935	ENSXMAG00000013356	zfr	95	93.243	Xiphophorus_maculatus