EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000004186 (Gene tree)
Gene ID: -
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 30862 bases
Position: chrGeneScaffold_4548:61873-92734
Accession: ZDB-GENE-030131-4076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000004509	Suf	PF05843.14	6.4e-09	1	1
ENSGMOP00000004509	S1	PF00575.23	4.3e-53	1	3
ENSGMOP00000004509	S1	PF00575.23	4.3e-53	2	3
ENSGMOP00000004509	S1	PF00575.23	4.3e-53	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000004645	-	5289	-	ENSGMOP00000004509	1762 (aa)	-	UPI00023F0497

Gene Model

Click here to download ENSGMOG00000004186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000004186's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000004186	pdcd11	94	44.511	ENSG00000148843	PDCD11	93	44.096	Homo_sapiens
ENSGMOG00000004186	pdcd11	94	61.287	ENSAPOG00000015629	pdcd11	93	61.538	Acanthochromis_polyacanthus
ENSGMOG00000004186	pdcd11	92	56.923	ENSAMEG00000017935	PDCD11	89	56.667	Ailuropoda_melanoleuca
ENSGMOG00000004186	pdcd11	58	54.565	ENSACIG00000006458	-	97	54.171	Amphilophus_citrinellus
ENSGMOG00000004186	pdcd11	94	61.222	ENSAOCG00000015287	pdcd11	93	61.635	Amphiprion_ocellaris
ENSGMOG00000004186	pdcd11	60	61.505	ENSAPEG00000020240	pdcd11	89	61.191	Amphiprion_percula
ENSGMOG00000004186	pdcd11	94	61.935	ENSATEG00000021043	pdcd11	94	62.060	Anabas_testudineus
ENSGMOG00000004186	pdcd11	91	53.543	ENSAPLG00000010301	PDCD11	89	53.543	Anas_platyrhynchos
ENSGMOG00000004186	pdcd11	93	45.722	ENSACAG00000004796	PDCD11	93	45.849	Anolis_carolinensis
ENSGMOG00000004186	pdcd11	94	44.228	ENSANAG00000034576	PDCD11	93	44.350	Aotus_nancymaae
ENSGMOG00000004186	pdcd11	86	77.113	ENSACLG00000018236	pdcd11	92	69.916	Astatotilapia_calliptera
ENSGMOG00000004186	pdcd11	94	46.981	ENSAMXG00000005458	pdcd11	96	48.244	Astyanax_mexicanus
ENSGMOG00000004186	pdcd11	94	42.530	ENSBTAG00000009715	PDCD11	93	42.266	Bos_taurus
ENSGMOG00000004186	pdcd11	92	57.552	ENSCJAG00000018257	PDCD11	93	44.417	Callithrix_jacchus
ENSGMOG00000004186	pdcd11	91	57.216	ENSCAFG00000010411	PDCD11	89	56.959	Canis_familiaris
ENSGMOG00000004186	pdcd11	92	57.216	ENSCAFG00020010369	PDCD11	89	56.959	Canis_lupus_dingo
ENSGMOG00000004186	pdcd11	93	42.720	ENSCHIG00000025218	PDCD11	93	42.375	Capra_hircus
ENSGMOG00000004186	pdcd11	89	43.758	ENSTSYG00000033423	PDCD11	92	43.650	Carlito_syrichta
ENSGMOG00000004186	pdcd11	85	42.409	ENSCAPG00000005386	PDCD11	91	42.409	Cavia_aperea
ENSGMOG00000004186	pdcd11	94	44.417	ENSCPOG00000010957	PDCD11	92	44.540	Cavia_porcellus
ENSGMOG00000004186	pdcd11	94	43.932	ENSCCAG00000018950	PDCD11	93	44.053	Cebus_capucinus
ENSGMOG00000004186	pdcd11	94	44.794	ENSCATG00000044331	PDCD11	92	44.121	Cercocebus_atys
ENSGMOG00000004186	pdcd11	93	45.031	ENSCLAG00000001029	PDCD11	92	44.772	Chinchilla_lanigera
ENSGMOG00000004186	pdcd11	94	44.782	ENSCSAG00000005346	PDCD11	93	44.242	Chlorocebus_sabaeus
ENSGMOG00000004186	pdcd11	71	62.791	ENSCHOG00000004796	PDCD11	66	62.791	Choloepus_hoffmanni
ENSGMOG00000004186	pdcd11	86	54.971	ENSCPBG00000024487	PDCD11	92	56.433	Chrysemys_picta_bellii
ENSGMOG00000004186	pdcd11	82	30.178	ENSCING00000002715	-	85	30.163	Ciona_intestinalis
ENSGMOG00000004186	pdcd11	92	56.250	ENSCANG00000043300	PDCD11	93	43.879	Colobus_angolensis_palliatus
ENSGMOG00000004186	pdcd11	94	43.574	ENSCGRG00001006458	Pdcd11	92	43.696	Cricetulus_griseus_chok1gshd
ENSGMOG00000004186	pdcd11	94	43.399	ENSCGRG00000003583	Pdcd11	92	43.521	Cricetulus_griseus_crigri
ENSGMOG00000004186	pdcd11	90	58.583	ENSCSEG00000010739	pdcd11	93	58.719	Cynoglossus_semilaevis
ENSGMOG00000004186	pdcd11	90	74.085	ENSCVAG00000018903	pdcd11	93	53.470	Cyprinodon_variegatus
ENSGMOG00000004186	pdcd11	91	61.170	ENSDARG00000052480	pdcd11	94	49.835	Danio_rerio
ENSGMOG00000004186	pdcd11	91	57.297	ENSDNOG00000013838	PDCD11	88	57.297	Dasypus_novemcinctus
ENSGMOG00000004186	pdcd11	94	43.263	ENSDORG00000010420	Pdcd11	93	43.511	Dipodomys_ordii
ENSGMOG00000004186	pdcd11	52	30.792	FBgn0039182	CG5728	64	30.205	Drosophila_melanogaster
ENSGMOG00000004186	pdcd11	78	44.390	ENSETEG00000000813	PDCD11	82	44.390	Echinops_telfairi
ENSGMOG00000004186	pdcd11	63	49.477	ENSEBUG00000002358	-	90	49.286	Eptatretus_burgeri
ENSGMOG00000004186	pdcd11	91	43.780	ENSEASG00005015159	PDCD11	92	43.818	Equus_asinus_asinus
ENSGMOG00000004186	pdcd11	94	43.462	ENSECAG00000020507	PDCD11	93	43.614	Equus_caballus
ENSGMOG00000004186	pdcd11	82	43.337	ENSEEUG00000009245	PDCD11	83	43.337	Erinaceus_europaeus
ENSGMOG00000004186	pdcd11	94	57.053	ENSELUG00000004211	pdcd11	93	57.305	Esox_lucius
ENSGMOG00000004186	pdcd11	93	44.803	ENSFCAG00000002384	PDCD11	93	44.803	Felis_catus
ENSGMOG00000004186	pdcd11	94	45.581	ENSFALG00000008775	PDCD11	93	45.581	Ficedula_albicollis
ENSGMOG00000004186	pdcd11	94	44.634	ENSFDAG00000009532	PDCD11	93	44.634	Fukomys_damarensis
ENSGMOG00000004186	pdcd11	83	76.898	ENSFHEG00000022997	pdcd11	87	78.873	Fundulus_heteroclitus
ENSGMOG00000004186	pdcd11	70	43.131	ENSGALG00000008265	PDCD11	89	43.072	Gallus_gallus
ENSGMOG00000004186	pdcd11	90	73.977	ENSGAFG00000012806	pdcd11	89	69.921	Gambusia_affinis
ENSGMOG00000004186	pdcd11	94	59.781	ENSGACG00000018233	pdcd11	98	71.318	Gasterosteus_aculeatus
ENSGMOG00000004186	pdcd11	89	44.789	ENSGAGG00000024314	PDCD11	93	45.037	Gopherus_agassizii
ENSGMOG00000004186	pdcd11	94	44.377	ENSGGOG00000011621	PDCD11	93	44.364	Gorilla_gorilla
ENSGMOG00000004186	pdcd11	94	62.817	ENSHBUG00000020226	pdcd11	93	62.817	Haplochromis_burtoni
ENSGMOG00000004186	pdcd11	94	44.552	ENSHGLG00000001462	PDCD11	93	44.807	Heterocephalus_glaber_female
ENSGMOG00000004186	pdcd11	94	43.099	ENSHGLG00100018779	PDCD11	93	43.357	Heterocephalus_glaber_male
ENSGMOG00000004186	pdcd11	94	59.500	ENSHCOG00000016006	pdcd11	99	59.925	Hippocampus_comes
ENSGMOG00000004186	pdcd11	56	50.655	ENSIPUG00000015102	pdcd11	98	50.662	Ictalurus_punctatus
ENSGMOG00000004186	pdcd11	93	43.735	ENSSTOG00000014553	PDCD11	92	43.596	Ictidomys_tridecemlineatus
ENSGMOG00000004186	pdcd11	94	44.717	ENSJJAG00000015523	Pdcd11	93	44.526	Jaculus_jaculus
ENSGMOG00000004186	pdcd11	50	56.988	ENSKMAG00000021182	pdcd11	98	56.627	Kryptolebias_marmoratus
ENSGMOG00000004186	pdcd11	94	52.505	ENSLOCG00000011818	pdcd11	93	53.128	Lepisosteus_oculatus
ENSGMOG00000004186	pdcd11	94	44.360	ENSLAFG00000008398	PDCD11	92	44.360	Loxodonta_africana
ENSGMOG00000004186	pdcd11	92	56.771	ENSMFAG00000044058	PDCD11	93	44.242	Macaca_fascicularis
ENSGMOG00000004186	pdcd11	92	56.510	ENSMMUG00000007058	PDCD11	93	44.000	Macaca_mulatta
ENSGMOG00000004186	pdcd11	94	44.256	ENSMNEG00000040726	PDCD11	93	44.121	Macaca_nemestrina
ENSGMOG00000004186	pdcd11	94	45.025	ENSMLEG00000040978	PDCD11	92	45.285	Mandrillus_leucophaeus
ENSGMOG00000004186	pdcd11	94	62.013	ENSMAMG00000009572	pdcd11	93	62.359	Mastacembelus_armatus
ENSGMOG00000004186	pdcd11	94	63.071	ENSMZEG00005008949	pdcd11	93	63.071	Maylandia_zebra
ENSGMOG00000004186	pdcd11	92	53.684	ENSMGAG00000010482	PDCD11	89	53.684	Meleagris_gallopavo
ENSGMOG00000004186	pdcd11	90	44.354	ENSMAUG00000014924	Pdcd11	97	42.728	Mesocricetus_auratus
ENSGMOG00000004186	pdcd11	94	45.177	ENSMICG00000012421	PDCD11	93	44.798	Microcebus_murinus
ENSGMOG00000004186	pdcd11	94	43.936	ENSMOCG00000021792	Pdcd11	92	44.074	Microtus_ochrogaster
ENSGMOG00000004186	pdcd11	94	53.829	ENSMMOG00000007572	pdcd11	96	57.667	Mola_mola
ENSGMOG00000004186	pdcd11	92	56.736	ENSMODG00000011077	PDCD11	89	55.959	Monodelphis_domestica
ENSGMOG00000004186	pdcd11	94	54.098	ENSMALG00000003859	pdcd11	97	57.802	Monopterus_albus
ENSGMOG00000004186	pdcd11	94	44.114	MGP_CAROLIEiJ_G0023050	Pdcd11	92	44.238	Mus_caroli
ENSGMOG00000004186	pdcd11	94	43.157	ENSMUSG00000025047	Pdcd11	92	43.247	Mus_musculus
ENSGMOG00000004186	pdcd11	94	45.031	MGP_PahariEiJ_G0014540	Pdcd11	92	45.031	Mus_pahari
ENSGMOG00000004186	pdcd11	94	43.527	MGP_SPRETEiJ_G0023971	Pdcd11	92	43.650	Mus_spretus
ENSGMOG00000004186	pdcd11	70	41.676	ENSMPUG00000016829	PDCD11	92	44.886	Mustela_putorius_furo
ENSGMOG00000004186	pdcd11	94	42.326	ENSMLUG00000004997	PDCD11	93	43.525	Myotis_lucifugus
ENSGMOG00000004186	pdcd11	94	44.082	ENSNGAG00000018143	Pdcd11	93	44.082	Nannospalax_galili
ENSGMOG00000004186	pdcd11	79	69.716	ENSNBRG00000021596	pdcd11	96	58.246	Neolamprologus_brichardi
ENSGMOG00000004186	pdcd11	92	56.510	ENSNLEG00000026700	PDCD11	92	43.879	Nomascus_leucogenys
ENSGMOG00000004186	pdcd11	56	63.556	ENSMEUG00000013719	-	57	63.274	Notamacropus_eugenii
ENSGMOG00000004186	pdcd11	89	43.758	ENSOPRG00000010593	PDCD11	88	44.034	Ochotona_princeps
ENSGMOG00000004186	pdcd11	93	43.468	ENSODEG00000008079	PDCD11	92	43.220	Octodon_degus
ENSGMOG00000004186	pdcd11	94	62.817	ENSONIG00000018835	pdcd11	93	62.944	Oreochromis_niloticus
ENSGMOG00000004186	pdcd11	94	44.654	ENSOANG00000001636	-	92	44.906	Ornithorhynchus_anatinus
ENSGMOG00000004186	pdcd11	94	43.234	ENSOCUG00000006312	PDCD11	93	42.977	Oryctolagus_cuniculus
ENSGMOG00000004186	pdcd11	94	60.414	ENSORLG00020003642	pdcd11	93	60.639	Oryzias_latipes_hni
ENSGMOG00000004186	pdcd11	94	60.414	ENSORLG00015001618	pdcd11	93	60.529	Oryzias_latipes_hsok
ENSGMOG00000004186	pdcd11	59	59.975	ENSOMEG00000010904	pdcd11	88	60.227	Oryzias_melastigma
ENSGMOG00000004186	pdcd11	92	55.814	ENSOGAG00000008683	PDCD11	93	44.310	Otolemur_garnettii
ENSGMOG00000004186	pdcd11	94	42.737	ENSOARG00000003719	PDCD11	93	42.737	Ovis_aries
ENSGMOG00000004186	pdcd11	94	44.205	ENSPPAG00000024593	PDCD11	92	43.976	Pan_paniscus
ENSGMOG00000004186	pdcd11	93	44.683	ENSPPRG00000015133	PDCD11	93	44.683	Panthera_pardus
ENSGMOG00000004186	pdcd11	93	44.683	ENSPTIG00000011433	PDCD11	93	44.683	Panthera_tigris_altaica
ENSGMOG00000004186	pdcd11	94	44.205	ENSPTRG00000002911	PDCD11	93	43.976	Pan_troglodytes
ENSGMOG00000004186	pdcd11	94	44.377	ENSPANG00000020959	PDCD11	93	44.121	Papio_anubis
ENSGMOG00000004186	pdcd11	93	52.735	ENSPKIG00000000973	pdcd11	93	52.707	Paramormyrops_kingsleyae
ENSGMOG00000004186	pdcd11	70	45.356	ENSPSIG00000005102	PDCD11	93	45.425	Pelodiscus_sinensis
ENSGMOG00000004186	pdcd11	72	74.921	ENSPMGG00000007289	pdcd11	91	74.062	Periophthalmus_magnuspinnatus
ENSGMOG00000004186	pdcd11	94	42.410	ENSPEMG00000010315	Pdcd11	93	41.737	Peromyscus_maniculatus_bairdii
ENSGMOG00000004186	pdcd11	92	45.103	ENSPMAG00000003098	pdcd11	92	39.632	Petromyzon_marinus
ENSGMOG00000004186	pdcd11	92	56.464	ENSPCIG00000001118	PDCD11	88	56.992	Phascolarctos_cinereus
ENSGMOG00000004186	pdcd11	94	62.169	ENSPFOG00000006012	pdcd11	93	62.547	Poecilia_formosa
ENSGMOG00000004186	pdcd11	90	68.354	ENSPLAG00000014494	pdcd11	97	59.624	Poecilia_latipinna
ENSGMOG00000004186	pdcd11	94	53.004	ENSPMEG00000018177	pdcd11	97	59.534	Poecilia_mexicana
ENSGMOG00000004186	pdcd11	94	62.169	ENSPREG00000000475	pdcd11	93	62.295	Poecilia_reticulata
ENSGMOG00000004186	pdcd11	94	44.189	ENSPPYG00000002621	PDCD11	92	44.175	Pongo_abelii
ENSGMOG00000004186	pdcd11	57	51.852	ENSPCAG00000011663	PDCD11	58	51.852	Procavia_capensis
ENSGMOG00000004186	pdcd11	91	45.672	ENSPCOG00000023327	PDCD11	97	45.260	Propithecus_coquereli
ENSGMOG00000004186	pdcd11	94	42.271	ENSPVAG00000004176	PDCD11	93	42.404	Pteropus_vampyrus
ENSGMOG00000004186	pdcd11	94	62.817	ENSPNYG00000003979	pdcd11	93	62.944	Pundamilia_nyererei
ENSGMOG00000004186	pdcd11	89	51.180	ENSPNAG00000017225	pdcd11	93	51.429	Pygocentrus_nattereri
ENSGMOG00000004186	pdcd11	94	43.030	ENSRNOG00000020304	Pdcd11	92	43.168	Rattus_norvegicus
ENSGMOG00000004186	pdcd11	92	56.250	ENSRBIG00000011889	PDCD11	93	43.879	Rhinopithecus_bieti
ENSGMOG00000004186	pdcd11	92	56.250	ENSRROG00000030483	PDCD11	93	43.879	Rhinopithecus_roxellana
ENSGMOG00000004186	pdcd11	85	30.428	YMR229C	-	93	30.757	Saccharomyces_cerevisiae
ENSGMOG00000004186	pdcd11	92	57.292	ENSSBOG00000030308	PDCD11	92	44.175	Saimiri_boliviensis_boliviensis
ENSGMOG00000004186	pdcd11	94	41.877	ENSSHAG00000018258	PDCD11	93	42.118	Sarcophilus_harrisii
ENSGMOG00000004186	pdcd11	94	53.319	ENSSFOG00015003881	pdcd11	93	53.297	Scleropages_formosus
ENSGMOG00000004186	pdcd11	94	62.295	ENSSMAG00000006612	pdcd11	93	62.295	Scophthalmus_maximus
ENSGMOG00000004186	pdcd11	92	55.912	ENSSDUG00000021302	pdcd11	98	57.017	Seriola_dumerili
ENSGMOG00000004186	pdcd11	50	60.175	ENSSLDG00000010228	pdcd11	98	60.710	Seriola_lalandi_dorsalis
ENSGMOG00000004186	pdcd11	67	69.388	ENSSARG00000002540	PDCD11	51	69.388	Sorex_araneus
ENSGMOG00000004186	pdcd11	91	60.870	ENSSPAG00000017558	pdcd11	93	60.870	Stegastes_partitus
ENSGMOG00000004186	pdcd11	72	56.728	ENSSSCG00000010599	PDCD11	93	42.020	Sus_scrofa
ENSGMOG00000004186	pdcd11	64	58.606	ENSTRUG00000014291	pdcd11	91	58.590	Takifugu_rubripes
ENSGMOG00000004186	pdcd11	92	69.271	ENSTNIG00000012085	pdcd11	93	58.076	Tetraodon_nigroviridis
ENSGMOG00000004186	pdcd11	90	59.483	ENSTBEG00000001893	PDCD11	87	59.483	Tupaia_belangeri
ENSGMOG00000004186	pdcd11	87	59.933	ENSTTRG00000003356	PDCD11	93	40.528	Tursiops_truncatus
ENSGMOG00000004186	pdcd11	91	57.364	ENSUAMG00000018015	PDCD11	93	43.250	Ursus_americanus
ENSGMOG00000004186	pdcd11	92	57.364	ENSUMAG00000023567	PDCD11	88	57.143	Ursus_maritimus
ENSGMOG00000004186	pdcd11	65	47.568	ENSVPAG00000007405	PDCD11	69	47.568	Vicugna_pacos
ENSGMOG00000004186	pdcd11	92	57.761	ENSVVUG00000004457	PDCD11	93	42.857	Vulpes_vulpes
ENSGMOG00000004186	pdcd11	94	45.042	ENSXETG00000009482	pdcd11	93	45.269	Xenopus_tropicalis
ENSGMOG00000004186	pdcd11	94	59.292	ENSXCOG00000012420	pdcd11	93	58.482	Xiphophorus_couchianus
ENSGMOG00000004186	pdcd11	94	61.286	ENSXMAG00000004638	pdcd11	93	61.412	Xiphophorus_maculatus