EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000004188 (Gene tree)
Gene ID: -
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 17114 bases
Position: chrGeneScaffold_4588:413560-430673
Accession: ZDB-GENE-050706-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000004482	NUC173	PF08161.12	9.9e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000004618	-	3876	-	ENSGMOP00000004482	1291 (aa)	-	UPI00023F0499

Gene Model

Click here to download ENSGMOG00000004188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000004188's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000004188	rrp12	92	73.684	ENSG00000052749	RRP12	100	74.432	Homo_sapiens
ENSGMOG00000004188	rrp12	99	73.364	ENSAPOG00000013355	rrp12	99	72.544	Acanthochromis_polyacanthus
ENSGMOG00000004188	rrp12	99	57.110	ENSAMEG00000000134	RRP12	99	57.110	Ailuropoda_melanoleuca
ENSGMOG00000004188	rrp12	99	72.387	ENSACIG00000022673	rrp12	99	71.650	Amphilophus_citrinellus
ENSGMOG00000004188	rrp12	99	73.754	ENSAOCG00000016149	rrp12	99	72.931	Amphiprion_ocellaris
ENSGMOG00000004188	rrp12	99	73.038	ENSAPEG00000016023	rrp12	99	72.222	Amphiprion_percula
ENSGMOG00000004188	rrp12	95	81.701	ENSATEG00000022627	rrp12	96	81.701	Anabas_testudineus
ENSGMOG00000004188	rrp12	90	64.107	ENSAPLG00000014387	RRP12	94	64.286	Anas_platyrhynchos
ENSGMOG00000004188	rrp12	99	55.058	ENSACAG00000002175	RRP12	99	55.212	Anolis_carolinensis
ENSGMOG00000004188	rrp12	92	74.342	ENSANAG00000037485	RRP12	99	74.342	Aotus_nancymaae
ENSGMOG00000004188	rrp12	95	81.481	ENSACLG00000007354	rrp12	96	81.481	Astatotilapia_calliptera
ENSGMOG00000004188	rrp12	99	65.972	ENSAMXG00000012852	rrp12	99	65.916	Astyanax_mexicanus
ENSGMOG00000004188	rrp12	99	61.780	ENSBTAG00000002191	RRP12	99	63.874	Bos_taurus
ENSGMOG00000004188	rrp12	85	54.397	ENSCJAG00000016549	-	99	54.216	Callithrix_jacchus
ENSGMOG00000004188	rrp12	99	57.033	ENSCAFG00000009043	RRP12	99	57.000	Canis_familiaris
ENSGMOG00000004188	rrp12	99	57.033	ENSCAFG00020005991	RRP12	99	57.000	Canis_lupus_dingo
ENSGMOG00000004188	rrp12	99	56.332	ENSCHIG00000011876	RRP12	99	56.178	Capra_hircus
ENSGMOG00000004188	rrp12	96	52.003	ENSCAPG00000008991	RRP12	98	51.965	Cavia_aperea
ENSGMOG00000004188	rrp12	99	57.397	ENSCPOG00000004215	RRP12	99	57.364	Cavia_porcellus
ENSGMOG00000004188	rrp12	70	50.494	ENSCCAG00000033123	-	82	50.220	Cebus_capucinus
ENSGMOG00000004188	rrp12	80	64.848	ENSCCAG00000024088	RRP12	99	66.587	Cebus_capucinus
ENSGMOG00000004188	rrp12	99	54.637	ENSCATG00000045310	RRP12	99	54.665	Cercocebus_atys
ENSGMOG00000004188	rrp12	99	56.999	ENSCLAG00000003753	RRP12	99	56.966	Chinchilla_lanigera
ENSGMOG00000004188	rrp12	88	55.323	ENSCSAG00000005877	RRP12	99	55.410	Chlorocebus_sabaeus
ENSGMOG00000004188	rrp12	56	69.900	ENSCHOG00000003095	-	58	69.551	Choloepus_hoffmanni
ENSGMOG00000004188	rrp12	94	58.697	ENSCPBG00000011935	RRP12	97	58.697	Chrysemys_picta_bellii
ENSGMOG00000004188	rrp12	59	40.645	ENSCSAVG00000006059	-	93	40.645	Ciona_savignyi
ENSGMOG00000004188	rrp12	92	74.342	ENSCANG00000031653	RRP12	99	74.342	Colobus_angolensis_palliatus
ENSGMOG00000004188	rrp12	90	57.155	ENSCGRG00001004338	Rrp12	99	56.985	Cricetulus_griseus_chok1gshd
ENSGMOG00000004188	rrp12	99	57.209	ENSCGRG00000011965	Rrp12	99	56.978	Cricetulus_griseus_crigri
ENSGMOG00000004188	rrp12	95	74.400	ENSCSEG00000007799	rrp12	96	74.400	Cynoglossus_semilaevis
ENSGMOG00000004188	rrp12	99	71.184	ENSCVAG00000003418	rrp12	99	70.611	Cyprinodon_variegatus
ENSGMOG00000004188	rrp12	99	64.660	ENSDARG00000022410	rrp12	99	65.214	Danio_rerio
ENSGMOG00000004188	rrp12	99	56.988	ENSDNOG00000005120	RRP12	99	57.209	Dasypus_novemcinctus
ENSGMOG00000004188	rrp12	99	57.529	ENSDORG00000009199	Rrp12	99	57.363	Dipodomys_ordii
ENSGMOG00000004188	rrp12	89	39.744	FBgn0030504	CG2691	95	31.125	Drosophila_melanogaster
ENSGMOG00000004188	rrp12	92	54.545	ENSETEG00000002455	RRP12	93	54.545	Echinops_telfairi
ENSGMOG00000004188	rrp12	73	55.357	ENSEBUG00000006555	rrp12	91	53.571	Eptatretus_burgeri
ENSGMOG00000004188	rrp12	99	57.375	ENSEASG00005008693	RRP12	99	57.517	Equus_asinus_asinus
ENSGMOG00000004188	rrp12	94	57.025	ENSECAG00000010892	RRP12	99	57.178	Equus_caballus
ENSGMOG00000004188	rrp12	100	68.981	ENSELUG00000010510	rrp12	94	77.368	Esox_lucius
ENSGMOG00000004188	rrp12	92	73.684	ENSFCAG00000028639	RRP12	99	73.684	Felis_catus
ENSGMOG00000004188	rrp12	93	56.301	ENSFALG00000008458	RRP12	99	56.647	Ficedula_albicollis
ENSGMOG00000004188	rrp12	99	57.342	ENSFDAG00000019108	RRP12	95	57.264	Fukomys_damarensis
ENSGMOG00000004188	rrp12	95	68.700	ENSFHEG00000004148	rrp12	95	68.700	Fundulus_heteroclitus
ENSGMOG00000004188	rrp12	99	57.430	ENSGALG00000041331	RRP12	96	59.761	Gallus_gallus
ENSGMOG00000004188	rrp12	99	70.739	ENSGAFG00000009038	rrp12	99	70.325	Gambusia_affinis
ENSGMOG00000004188	rrp12	99	71.529	ENSGACG00000007175	rrp12	99	71.030	Gasterosteus_aculeatus
ENSGMOG00000004188	rrp12	61	69.331	ENSGAGG00000019169	RRP12	96	62.976	Gopherus_agassizii
ENSGMOG00000004188	rrp12	92	73.684	ENSGGOG00000014850	RRP12	99	73.026	Gorilla_gorilla
ENSGMOG00000004188	rrp12	95	81.481	ENSHBUG00000023527	rrp12	96	81.481	Haplochromis_burtoni
ENSGMOG00000004188	rrp12	99	57.462	ENSHGLG00000016772	RRP12	100	57.429	Heterocephalus_glaber_female
ENSGMOG00000004188	rrp12	99	57.462	ENSHGLG00100015110	RRP12	100	57.429	Heterocephalus_glaber_male
ENSGMOG00000004188	rrp12	95	79.936	ENSHCOG00000019519	rrp12	96	79.936	Hippocampus_comes
ENSGMOG00000004188	rrp12	95	68.354	ENSIPUG00000000311	RRP12	99	67.581	Ictalurus_punctatus
ENSGMOG00000004188	rrp12	99	57.940	ENSSTOG00000006515	RRP12	99	58.192	Ictidomys_tridecemlineatus
ENSGMOG00000004188	rrp12	96	56.755	ENSJJAG00000000110	Rrp12	99	56.629	Jaculus_jaculus
ENSGMOG00000004188	rrp12	99	70.872	ENSKMAG00000020621	rrp12	99	70.456	Kryptolebias_marmoratus
ENSGMOG00000004188	rrp12	99	70.840	ENSLBEG00000015335	rrp12	99	70.918	Labrus_bergylta
ENSGMOG00000004188	rrp12	63	60.674	ENSLACG00000016633	RRP12	72	60.674	Latimeria_chalumnae
ENSGMOG00000004188	rrp12	99	62.307	ENSLOCG00000003846	rrp12	99	62.074	Lepisosteus_oculatus
ENSGMOG00000004188	rrp12	99	57.625	ENSLAFG00000015965	RRP12	99	57.899	Loxodonta_africana
ENSGMOG00000004188	rrp12	92	74.342	ENSMFAG00000041558	RRP12	99	74.342	Macaca_fascicularis
ENSGMOG00000004188	rrp12	92	74.342	ENSMMUG00000019634	RRP12	99	74.342	Macaca_mulatta
ENSGMOG00000004188	rrp12	92	74.342	ENSMNEG00000036759	RRP12	99	74.342	Macaca_nemestrina
ENSGMOG00000004188	rrp12	92	74.342	ENSMLEG00000041317	RRP12	99	74.342	Mandrillus_leucophaeus
ENSGMOG00000004188	rrp12	95	80.899	ENSMAMG00000002964	rrp12	96	80.899	Mastacembelus_armatus
ENSGMOG00000004188	rrp12	95	81.481	ENSMZEG00005003241	rrp12	96	81.481	Maylandia_zebra
ENSGMOG00000004188	rrp12	98	56.549	ENSMGAG00000009829	RRP12	98	56.784	Meleagris_gallopavo
ENSGMOG00000004188	rrp12	90	59.830	ENSMAUG00000020743	Rrp12	92	59.660	Mesocricetus_auratus
ENSGMOG00000004188	rrp12	92	74.510	ENSMICG00000007624	RRP12	99	74.510	Microcebus_murinus
ENSGMOG00000004188	rrp12	99	57.935	ENSMOCG00000006753	Rrp12	99	57.781	Microtus_ochrogaster
ENSGMOG00000004188	rrp12	99	70.511	ENSMMOG00000010708	rrp12	99	70.046	Mola_mola
ENSGMOG00000004188	rrp12	99	57.318	ENSMODG00000004315	RRP12	99	57.475	Monodelphis_domestica
ENSGMOG00000004188	rrp12	95	78.652	ENSMALG00000016560	rrp12	96	78.652	Monopterus_albus
ENSGMOG00000004188	rrp12	99	57.939	MGP_CAROLIEiJ_G0022957	Rrp12	99	57.863	Mus_caroli
ENSGMOG00000004188	rrp12	99	58.218	ENSMUSG00000035049	Rrp12	99	58.141	Mus_musculus
ENSGMOG00000004188	rrp12	99	58.320	MGP_PahariEiJ_G0014447	Rrp12	99	58.243	Mus_pahari
ENSGMOG00000004188	rrp12	99	58.372	MGP_SPRETEiJ_G0023878	Rrp12	99	58.295	Mus_spretus
ENSGMOG00000004188	rrp12	99	57.121	ENSMPUG00000017046	RRP12	99	57.198	Mustela_putorius_furo
ENSGMOG00000004188	rrp12	99	57.483	ENSMLUG00000017160	RRP12	99	57.483	Myotis_lucifugus
ENSGMOG00000004188	rrp12	99	57.077	ENSNGAG00000024144	Rrp12	99	57.077	Nannospalax_galili
ENSGMOG00000004188	rrp12	95	81.965	ENSNBRG00000009987	rrp12	96	81.965	Neolamprologus_brichardi
ENSGMOG00000004188	rrp12	85	75.000	ENSNLEG00000013762	RRP12	94	74.342	Nomascus_leucogenys
ENSGMOG00000004188	rrp12	99	51.650	ENSMEUG00000003185	RRP12	99	51.780	Notamacropus_eugenii
ENSGMOG00000004188	rrp12	93	65.442	ENSOPRG00000005001	RRP12	94	65.442	Ochotona_princeps
ENSGMOG00000004188	rrp12	99	57.220	ENSODEG00000016439	RRP12	99	57.220	Octodon_degus
ENSGMOG00000004188	rrp12	99	72.543	ENSONIG00000009528	rrp12	99	71.960	Oreochromis_niloticus
ENSGMOG00000004188	rrp12	95	65.127	ENSOANG00000006560	RRP12	96	65.127	Ornithorhynchus_anatinus
ENSGMOG00000004188	rrp12	99	57.663	ENSOCUG00000005662	RRP12	99	57.552	Oryctolagus_cuniculus
ENSGMOG00000004188	rrp12	99	70.170	ENSORLG00000008688	rrp12	99	72.774	Oryzias_latipes
ENSGMOG00000004188	rrp12	96	70.794	ENSORLG00020002355	rrp12	99	70.720	Oryzias_latipes_hni
ENSGMOG00000004188	rrp12	99	70.479	ENSORLG00015006709	rrp12	99	70.224	Oryzias_latipes_hsok
ENSGMOG00000004188	rrp12	96	70.952	ENSOMEG00000002609	rrp12	98	71.040	Oryzias_melastigma
ENSGMOG00000004188	rrp12	99	56.823	ENSOGAG00000001626	RRP12	99	56.978	Otolemur_garnettii
ENSGMOG00000004188	rrp12	95	66.560	ENSOARG00000009681	RRP12	96	66.560	Ovis_aries
ENSGMOG00000004188	rrp12	92	73.684	ENSPPAG00000043885	RRP12	99	73.684	Pan_paniscus
ENSGMOG00000004188	rrp12	92	74.342	ENSPPRG00000002029	RRP12	99	74.342	Panthera_pardus
ENSGMOG00000004188	rrp12	92	73.684	ENSPTIG00000004428	RRP12	99	73.684	Panthera_tigris_altaica
ENSGMOG00000004188	rrp12	92	73.684	ENSPTRG00000002806	RRP12	99	73.026	Pan_troglodytes
ENSGMOG00000004188	rrp12	92	74.342	ENSPANG00000021360	RRP12	99	74.342	Papio_anubis
ENSGMOG00000004188	rrp12	99	65.271	ENSPKIG00000016516	rrp12	99	64.884	Paramormyrops_kingsleyae
ENSGMOG00000004188	rrp12	99	69.057	ENSPMGG00000020217	rrp12	99	68.963	Periophthalmus_magnuspinnatus
ENSGMOG00000004188	rrp12	99	58.020	ENSPEMG00000008437	Rrp12	99	57.866	Peromyscus_maniculatus_bairdii
ENSGMOG00000004188	rrp12	82	50.656	ENSPMAG00000007493	rrp12	82	50.656	Petromyzon_marinus
ENSGMOG00000004188	rrp12	96	73.154	ENSPCIG00000002157	RRP12	96	73.154	Phascolarctos_cinereus
ENSGMOG00000004188	rrp12	99	70.817	ENSPFOG00000014975	rrp12	99	70.247	Poecilia_formosa
ENSGMOG00000004188	rrp12	99	70.661	ENSPLAG00000009840	rrp12	99	70.093	Poecilia_latipinna
ENSGMOG00000004188	rrp12	99	70.895	ENSPMEG00000021871	rrp12	99	70.325	Poecilia_mexicana
ENSGMOG00000004188	rrp12	99	70.078	ENSPREG00000020950	rrp12	99	69.438	Poecilia_reticulata
ENSGMOG00000004188	rrp12	99	56.813	ENSPPYG00000002528	RRP12	99	56.780	Pongo_abelii
ENSGMOG00000004188	rrp12	89	75.141	ENSPCAG00000008967	RRP12	89	75.141	Procavia_capensis
ENSGMOG00000004188	rrp12	92	74.342	ENSPCOG00000014009	RRP12	99	74.342	Propithecus_coquereli
ENSGMOG00000004188	rrp12	92	69.502	ENSPVAG00000003370	RRP12	92	69.502	Pteropus_vampyrus
ENSGMOG00000004188	rrp12	95	81.965	ENSPNYG00000009451	rrp12	96	81.965	Pundamilia_nyererei
ENSGMOG00000004188	rrp12	99	65.998	ENSPNAG00000007658	rrp12	99	66.098	Pygocentrus_nattereri
ENSGMOG00000004188	rrp12	99	58.211	ENSRNOG00000048495	Rrp12	99	58.057	Rattus_norvegicus
ENSGMOG00000004188	rrp12	92	74.342	ENSRBIG00000021296	RRP12	99	74.342	Rhinopithecus_bieti
ENSGMOG00000004188	rrp12	92	74.342	ENSRROG00000032482	RRP12	99	74.342	Rhinopithecus_roxellana
ENSGMOG00000004188	rrp12	92	73.684	ENSSBOG00000030992	RRP12	100	73.684	Saimiri_boliviensis_boliviensis
ENSGMOG00000004188	rrp12	99	57.642	ENSSHAG00000018275	RRP12	99	57.797	Sarcophilus_harrisii
ENSGMOG00000004188	rrp12	99	66.667	ENSSFOG00015016400	rrp12	99	66.123	Scleropages_formosus
ENSGMOG00000004188	rrp12	95	74.459	ENSSMAG00000004047	rrp12	95	77.472	Scophthalmus_maximus
ENSGMOG00000004188	rrp12	95	81.220	ENSSDUG00000022871	rrp12	96	81.220	Seriola_dumerili
ENSGMOG00000004188	rrp12	99	72.352	ENSSLDG00000003038	rrp12	99	71.771	Seriola_lalandi_dorsalis
ENSGMOG00000004188	rrp12	98	55.677	ENSSPUG00000012221	RRP12	99	55.581	Sphenodon_punctatus
ENSGMOG00000004188	rrp12	99	72.897	ENSSPAG00000002261	rrp12	99	72.622	Stegastes_partitus
ENSGMOG00000004188	rrp12	99	56.978	ENSSSCG00000010514	RRP12	99	56.978	Sus_scrofa
ENSGMOG00000004188	rrp12	88	53.212	ENSTGUG00000009711	RRP12	99	53.550	Taeniopygia_guttata
ENSGMOG00000004188	rrp12	95	71.981	ENSTRUG00000012017	rrp12	95	71.981	Takifugu_rubripes
ENSGMOG00000004188	rrp12	99	69.558	ENSTNIG00000016522	rrp12	99	69.094	Tetraodon_nigroviridis
ENSGMOG00000004188	rrp12	77	75.000	ENSTBEG00000004907	RRP12	80	75.000	Tupaia_belangeri
ENSGMOG00000004188	rrp12	99	55.401	ENSTTRG00000009878	RRP12	99	55.324	Tursiops_truncatus
ENSGMOG00000004188	rrp12	95	68.800	ENSUAMG00000009092	RRP12	95	70.266	Ursus_americanus
ENSGMOG00000004188	rrp12	94	66.889	ENSUMAG00000021621	RRP12	95	66.777	Ursus_maritimus
ENSGMOG00000004188	rrp12	99	57.077	ENSVVUG00000023168	RRP12	99	57.043	Vulpes_vulpes
ENSGMOG00000004188	rrp12	95	68.429	ENSXETG00000003430	rrp12	95	68.429	Xenopus_tropicalis
ENSGMOG00000004188	rrp12	86	80.257	ENSXCOG00000012082	rrp12	93	80.257	Xiphophorus_couchianus
ENSGMOG00000004188	rrp12	99	70.117	ENSXMAG00000013498	rrp12	99	70.170	Xiphophorus_maculatus