EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000004315 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 8715 bases
Position: chrGeneScaffold_2482:140729-149443
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000004571	zf-C2H2	PF00096.26	7.8e-43	1	7
ENSGMOP00000004571	zf-C2H2	PF00096.26	7.8e-43	2	7
ENSGMOP00000004571	zf-C2H2	PF00096.26	7.8e-43	3	7
ENSGMOP00000004571	zf-C2H2	PF00096.26	7.8e-43	4	7
ENSGMOP00000004571	zf-C2H2	PF00096.26	7.8e-43	5	7
ENSGMOP00000004571	zf-C2H2	PF00096.26	7.8e-43	6	7
ENSGMOP00000004571	zf-C2H2	PF00096.26	7.8e-43	7	7
ENSGMOP00000004571	zf-met	PF12874.7	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000004709	-	1059	-	ENSGMOP00000004571	353 (aa)	-	UPI00023F0BD7

Gene Model

Click here to download ENSGMOG00000004315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000004315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000004315	-	94	32.530	ENSGMOG00000001062	patz1	54	32.510
ENSGMOG00000004315	-	73	40.367	ENSGMOG00000017815	snai1a	51	40.367
ENSGMOG00000004315	-	94	44.000	ENSGMOG00000019123	gfi1b	62	44.000
ENSGMOG00000004315	-	99	32.234	ENSGMOG00000002344	zbtb41	58	31.977
ENSGMOG00000004315	-	95	44.444	ENSGMOG00000017526	-	98	44.444
ENSGMOG00000004315	-	95	42.857	ENSGMOG00000018506	-	100	42.857
ENSGMOG00000004315	-	96	37.226	ENSGMOG00000000127	-	58	37.226
ENSGMOG00000004315	-	95	39.103	ENSGMOG00000000494	-	98	39.103
ENSGMOG00000004315	-	97	41.121	ENSGMOG00000009187	ZNF626	76	41.121
ENSGMOG00000004315	-	62	46.226	ENSGMOG00000016007	-	92	46.226
ENSGMOG00000004315	-	99	36.842	ENSGMOG00000003238	-	99	38.938
ENSGMOG00000004315	-	95	36.709	ENSGMOG00000011017	GZF1	55	36.709
ENSGMOG00000004315	-	94	33.688	ENSGMOG00000007809	-	99	35.547
ENSGMOG00000004315	-	95	52.747	ENSGMOG00000020024	-	100	52.747
ENSGMOG00000004315	-	96	38.961	ENSGMOG00000011409	e4f1	67	38.961
ENSGMOG00000004315	-	95	39.791	ENSGMOG00000016554	znf646	99	39.791
ENSGMOG00000004315	-	97	31.959	ENSGMOG00000004242	znf319b	87	32.639
ENSGMOG00000004315	-	99	37.324	ENSGMOG00000007538	znf366	66	38.406
ENSGMOG00000004315	-	99	37.288	ENSGMOG00000006668	znf236	63	37.288
ENSGMOG00000004315	-	65	31.395	ENSGMOG00000002375	-	100	31.395
ENSGMOG00000004315	-	78	37.681	ENSGMOG00000002669	snai2	56	37.681
ENSGMOG00000004315	-	91	42.857	ENSGMOG00000020146	-	98	42.857
ENSGMOG00000004315	-	94	47.179	ENSGMOG00000020149	si:dkeyp-113d7.1	100	47.179
ENSGMOG00000004315	-	61	33.333	ENSGMOG00000000493	-	97	33.333
ENSGMOG00000004315	-	78	46.970	ENSGMOG00000017518	-	64	46.970
ENSGMOG00000004315	-	98	37.097	ENSGMOG00000016613	-	97	37.278
ENSGMOG00000004315	-	95	33.333	ENSGMOG00000017555	znf710b	80	33.716
ENSGMOG00000004315	-	97	44.681	ENSGMOG00000012990	-	100	44.681
ENSGMOG00000004315	-	97	40.000	ENSGMOG00000000629	scrt1b	59	40.000
ENSGMOG00000004315	-	100	33.889	ENSGMOG00000007875	ZNF319	99	35.294
ENSGMOG00000004315	-	96	39.912	ENSGMOG00000004063	ZNF628	99	40.761
ENSGMOG00000004315	-	97	36.765	ENSGMOG00000012038	prdm5	100	36.765
ENSGMOG00000004315	-	71	32.031	ENSGMOG00000005447	hinfp	51	32.031
ENSGMOG00000004315	-	94	51.880	ENSGMOG00000005588	-	100	51.880

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000004315	-	95	52.459	ENSACIG00000011153	-	69	52.459	Amphilophus_citrinellus
ENSGMOG00000004315	-	95	50.459	ENSACIG00000019791	-	91	50.459	Amphilophus_citrinellus
ENSGMOG00000004315	-	97	43.089	ENSACLG00000020474	-	90	43.089	Astatotilapia_calliptera
ENSGMOG00000004315	-	96	37.681	ENSACLG00000022499	-	84	37.681	Astatotilapia_calliptera
ENSGMOG00000004315	-	95	40.529	ENSACLG00000017329	-	81	40.529	Astatotilapia_calliptera
ENSGMOG00000004315	-	95	37.459	ENSACLG00000014167	-	59	37.097	Astatotilapia_calliptera
ENSGMOG00000004315	-	97	41.071	ENSACLG00000001507	-	80	41.071	Astatotilapia_calliptera
ENSGMOG00000004315	-	94	44.203	ENSAMXG00000031501	-	95	44.203	Astyanax_mexicanus
ENSGMOG00000004315	-	99	40.830	ENSAMXG00000038324	-	80	40.830	Astyanax_mexicanus
ENSGMOG00000004315	-	95	47.807	ENSAMXG00000031646	-	95	47.807	Astyanax_mexicanus
ENSGMOG00000004315	-	96	43.042	ENSAMXG00000036849	-	83	47.549	Astyanax_mexicanus
ENSGMOG00000004315	-	98	45.259	ENSAMXG00000031844	-	91	45.259	Astyanax_mexicanus
ENSGMOG00000004315	-	97	39.645	ENSAMXG00000039770	-	84	39.104	Astyanax_mexicanus
ENSGMOG00000004315	-	94	42.462	ENSAMXG00000010078	-	85	42.462	Astyanax_mexicanus
ENSGMOG00000004315	-	94	41.304	ENSAMXG00000039162	-	95	41.304	Astyanax_mexicanus
ENSGMOG00000004315	-	94	38.462	ENSCHIG00000015741	-	89	38.793	Capra_hircus
ENSGMOG00000004315	-	95	44.595	ENSCCAG00000035188	-	83	44.595	Cebus_capucinus
ENSGMOG00000004315	-	99	46.023	ENSCPBG00000001258	-	97	46.023	Chrysemys_picta_bellii
ENSGMOG00000004315	-	97	41.840	ENSDNOG00000048084	-	99	42.012	Dasypus_novemcinctus
ENSGMOG00000004315	-	100	35.443	ENSETEG00000002865	-	85	35.443	Echinops_telfairi
ENSGMOG00000004315	-	98	40.155	ENSEBUG00000012748	-	69	40.111	Eptatretus_burgeri
ENSGMOG00000004315	-	99	43.902	ENSEBUG00000008157	-	98	43.902	Eptatretus_burgeri
ENSGMOG00000004315	-	96	40.698	ENSEBUG00000011479	-	70	40.698	Eptatretus_burgeri
ENSGMOG00000004315	-	96	42.795	ENSEBUG00000011582	-	73	42.795	Eptatretus_burgeri
ENSGMOG00000004315	-	95	41.404	ENSECAG00000035557	-	75	40.878	Equus_caballus
ENSGMOG00000004315	-	96	38.492	ENSFHEG00000016184	-	86	38.492	Fundulus_heteroclitus
ENSGMOG00000004315	-	99	36.000	ENSGACG00000019863	-	98	36.000	Gasterosteus_aculeatus
ENSGMOG00000004315	-	99	43.874	ENSGAGG00000013851	-	75	43.874	Gopherus_agassizii
ENSGMOG00000004315	-	99	46.296	ENSGAGG00000007230	-	81	46.296	Gopherus_agassizii
ENSGMOG00000004315	-	95	49.541	ENSHBUG00000000146	-	78	49.541	Haplochromis_burtoni
ENSGMOG00000004315	-	95	49.767	ENSHBUG00000019800	-	92	49.767	Haplochromis_burtoni
ENSGMOG00000004315	-	95	41.481	ENSHBUG00000017372	-	89	44.330	Haplochromis_burtoni
ENSGMOG00000004315	-	91	52.222	ENSHBUG00000021028	-	83	39.927	Haplochromis_burtoni
ENSGMOG00000004315	-	95	36.220	ENSHBUG00000013264	-	87	36.220	Haplochromis_burtoni
ENSGMOG00000004315	-	95	37.624	ENSHBUG00000006238	-	95	37.624	Haplochromis_burtoni
ENSGMOG00000004315	-	95	42.433	ENSHGLG00000018394	-	94	42.433	Heterocephalus_glaber_female
ENSGMOG00000004315	-	95	45.455	ENSIPUG00000009750	-	81	45.455	Ictalurus_punctatus
ENSGMOG00000004315	-	95	47.179	ENSIPUG00000011073	-	98	47.179	Ictalurus_punctatus
ENSGMOG00000004315	-	98	37.234	ENSIPUG00000021527	-	98	39.394	Ictalurus_punctatus
ENSGMOG00000004315	-	96	43.874	ENSIPUG00000015233	-	71	43.874	Ictalurus_punctatus
ENSGMOG00000004315	-	95	43.111	ENSIPUG00000006936	-	95	39.259	Ictalurus_punctatus
ENSGMOG00000004315	-	95	40.984	ENSIPUG00000021434	-	94	40.984	Ictalurus_punctatus
ENSGMOG00000004315	-	89	41.077	ENSIPUG00000013065	-	94	38.507	Ictalurus_punctatus
ENSGMOG00000004315	-	96	44.211	ENSIPUG00000021472	-	75	44.211	Ictalurus_punctatus
ENSGMOG00000004315	-	96	44.033	ENSIPUG00000001941	-	93	44.033	Ictalurus_punctatus
ENSGMOG00000004315	-	99	43.775	ENSIPUG00000022751	-	99	43.182	Ictalurus_punctatus
ENSGMOG00000004315	-	95	46.154	ENSIPUG00000021518	-	91	44.843	Ictalurus_punctatus
ENSGMOG00000004315	-	95	47.573	ENSIPUG00000021484	-	98	47.573	Ictalurus_punctatus
ENSGMOG00000004315	-	95	45.366	ENSIPUG00000003960	-	77	45.366	Ictalurus_punctatus
ENSGMOG00000004315	-	97	44.000	ENSSTOG00000034297	-	64	44.000	Ictidomys_tridecemlineatus
ENSGMOG00000004315	-	95	48.333	ENSMFAG00000046052	-	84	48.333	Macaca_fascicularis
ENSGMOG00000004315	-	95	48.536	ENSMNEG00000041636	-	84	48.536	Macaca_nemestrina
ENSGMOG00000004315	-	95	48.333	ENSMLEG00000032640	-	84	48.333	Mandrillus_leucophaeus
ENSGMOG00000004315	-	99	43.017	ENSMAMG00000009051	-	91	43.017	Mastacembelus_armatus
ENSGMOG00000004315	-	95	35.689	ENSMZEG00005019982	-	95	35.689	Maylandia_zebra
ENSGMOG00000004315	-	95	41.014	ENSMZEG00005021421	-	95	41.014	Maylandia_zebra
ENSGMOG00000004315	-	99	42.544	ENSMZEG00005027285	-	83	42.544	Maylandia_zebra
ENSGMOG00000004315	-	96	35.088	ENSMZEG00005012737	-	81	35.088	Maylandia_zebra
ENSGMOG00000004315	-	96	38.158	ENSMZEG00005020736	-	91	38.158	Maylandia_zebra
ENSGMOG00000004315	-	95	34.824	ENSMZEG00005027950	-	89	34.824	Maylandia_zebra
ENSGMOG00000004315	-	95	44.444	ENSMALG00000004413	-	96	44.444	Monopterus_albus
ENSGMOG00000004315	-	97	36.760	ENSNBRG00000016603	-	89	36.760	Neolamprologus_brichardi
ENSGMOG00000004315	-	99	40.385	ENSNBRG00000015652	-	95	40.392	Neolamprologus_brichardi
ENSGMOG00000004315	-	95	46.584	ENSNBRG00000013604	-	70	46.584	Neolamprologus_brichardi
ENSGMOG00000004315	-	95	50.847	ENSNBRG00000015873	-	98	49.239	Neolamprologus_brichardi
ENSGMOG00000004315	-	98	38.408	ENSNBRG00000016582	-	86	38.408	Neolamprologus_brichardi
ENSGMOG00000004315	-	95	37.549	ENSONIG00000000122	-	100	37.549	Oreochromis_niloticus
ENSGMOG00000004315	-	95	47.090	ENSONIG00000020516	-	97	47.090	Oreochromis_niloticus
ENSGMOG00000004315	-	97	40.969	ENSONIG00000008953	-	94	40.969	Oreochromis_niloticus
ENSGMOG00000004315	-	94	42.544	ENSONIG00000021124	-	100	42.544	Oreochromis_niloticus
ENSGMOG00000004315	-	97	40.529	ENSONIG00000007931	-	87	40.529	Oreochromis_niloticus
ENSGMOG00000004315	-	96	42.857	ENSONIG00000000093	-	99	35.920	Oreochromis_niloticus
ENSGMOG00000004315	-	95	40.724	ENSONIG00000001834	-	92	40.719	Oreochromis_niloticus
ENSGMOG00000004315	-	97	35.987	ENSONIG00000015166	-	100	36.570	Oreochromis_niloticus
ENSGMOG00000004315	-	98	44.048	ENSORLG00015012951	-	81	43.231	Oryzias_latipes_hsok
ENSGMOG00000004315	-	95	43.077	ENSOGAG00000025289	-	85	42.136	Otolemur_garnettii
ENSGMOG00000004315	-	95	48.333	ENSPANG00000030978	-	89	48.333	Papio_anubis
ENSGMOG00000004315	-	95	37.262	ENSPEMG00000016975	Zfp940	72	36.170	Peromyscus_maniculatus_bairdii
ENSGMOG00000004315	-	95	46.667	ENSPMEG00000004595	-	97	43.323	Poecilia_mexicana
ENSGMOG00000004315	-	94	42.308	ENSPPYG00000009906	-	72	42.308	Pongo_abelii
ENSGMOG00000004315	-	95	40.088	ENSPNYG00000024244	-	86	40.088	Pundamilia_nyererei
ENSGMOG00000004315	-	95	43.791	ENSPNAG00000011625	-	86	43.182	Pygocentrus_nattereri
ENSGMOG00000004315	-	96	42.088	ENSPNAG00000019338	-	91	42.088	Pygocentrus_nattereri
ENSGMOG00000004315	-	95	48.333	ENSSBOG00000029728	-	84	48.333	Saimiri_boliviensis_boliviensis
ENSGMOG00000004315	-	95	43.082	ENSSPUG00000010059	-	90	42.901	Sphenodon_punctatus