EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000004522 (Gene tree)
Gene ID: -
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: high density lipoprotein binding protein b
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 15079 bases
Position: chrGeneScaffold_4011:8164-23242
Accession: ZDB-GENE-030131-6822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000004831	KH_1	PF00013.29	7.4e-123	1	9
ENSGMOP00000004831	KH_1	PF00013.29	7.4e-123	2	9
ENSGMOP00000004831	KH_1	PF00013.29	7.4e-123	3	9
ENSGMOP00000004831	KH_1	PF00013.29	7.4e-123	4	9
ENSGMOP00000004831	KH_1	PF00013.29	7.4e-123	5	9
ENSGMOP00000004831	KH_1	PF00013.29	7.4e-123	6	9
ENSGMOP00000004831	KH_1	PF00013.29	7.4e-123	7	9
ENSGMOP00000004831	KH_1	PF00013.29	7.4e-123	8	9
ENSGMOP00000004831	KH_1	PF00013.29	7.4e-123	9	9

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000004972	-	3603	-	ENSGMOP00000004831	1201 (aa)	-	UPI00023F066F

Gene Model

Click here to download ENSGMOG00000004522's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000004522's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000004522	hdlbpb	71	69.243	ENSGMOG00000009932	hdlbpa	94	69.243

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000004522	hdlbpb	78	88.310	ENSAPOG00000006904	hdlbpb	95	88.310	Acanthochromis_polyacanthus
ENSGMOG00000004522	hdlbpb	77	84.977	ENSACIG00000016154	hdlbpb	96	84.977	Amphilophus_citrinellus
ENSGMOG00000004522	hdlbpb	78	88.712	ENSAOCG00000004083	hdlbpb	96	88.712	Amphiprion_ocellaris
ENSGMOG00000004522	hdlbpb	78	88.310	ENSAPEG00000012270	hdlbpb	95	88.310	Amphiprion_percula
ENSGMOG00000004522	hdlbpb	78	88.076	ENSATEG00000019877	hdlbpb	96	88.076	Anabas_testudineus
ENSGMOG00000004522	hdlbpb	75	80.983	ENSACAG00000003606	-	96	80.983	Anolis_carolinensis
ENSGMOG00000004522	hdlbpb	78	87.362	ENSACLG00000006618	hdlbpb	95	87.362	Astatotilapia_calliptera
ENSGMOG00000004522	hdlbpb	76	79.621	ENSAMXG00000019946	hdlbpb	95	79.621	Astyanax_mexicanus
ENSGMOG00000004522	hdlbpb	78	87.362	ENSCSEG00000000955	hdlbpb	95	89.962	Cynoglossus_semilaevis
ENSGMOG00000004522	hdlbpb	78	86.888	ENSCVAG00000005345	hdlbpb	96	86.888	Cyprinodon_variegatus
ENSGMOG00000004522	hdlbpb	78	83.570	ENSDARG00000061864	hdlbpb	95	83.570	Danio_rerio
ENSGMOG00000004522	hdlbpb	69	72.651	ENSEBUG00000005304	hdlbpb	94	72.651	Eptatretus_burgeri
ENSGMOG00000004522	hdlbpb	78	82.677	ENSELUG00000019925	hdlbpb	96	82.677	Esox_lucius
ENSGMOG00000004522	hdlbpb	78	79.310	ENSFHEG00000001701	hdlbpb	95	79.310	Fundulus_heteroclitus
ENSGMOG00000004522	hdlbpb	78	87.362	ENSGAFG00000005278	hdlbpb	95	87.362	Gambusia_affinis
ENSGMOG00000004522	hdlbpb	78	87.917	ENSGACG00000019361	hdlbpb	95	88.871	Gasterosteus_aculeatus
ENSGMOG00000004522	hdlbpb	78	87.204	ENSHBUG00000018434	hdlbpb	95	87.204	Haplochromis_burtoni
ENSGMOG00000004522	hdlbpb	78	81.833	ENSIPUG00000003291	HDLBP	100	81.833	Ictalurus_punctatus
ENSGMOG00000004522	hdlbpb	78	86.888	ENSKMAG00000016562	hdlbpb	95	86.888	Kryptolebias_marmoratus
ENSGMOG00000004522	hdlbpb	78	88.152	ENSLBEG00000027855	hdlbpb	95	88.152	Labrus_bergylta
ENSGMOG00000004522	hdlbpb	74	79.180	ENSLACG00000007661	hdlbpb	95	79.180	Latimeria_chalumnae
ENSGMOG00000004522	hdlbpb	78	79.114	ENSLOCG00000013909	hdlbpb	96	79.114	Lepisosteus_oculatus
ENSGMOG00000004522	hdlbpb	78	87.937	ENSMAMG00000003035	hdlbpb	96	87.937	Mastacembelus_armatus
ENSGMOG00000004522	hdlbpb	78	87.362	ENSMZEG00005021465	hdlbpb	95	87.362	Maylandia_zebra
ENSGMOG00000004522	hdlbpb	78	87.836	ENSMMOG00000012525	hdlbpb	95	87.836	Mola_mola
ENSGMOG00000004522	hdlbpb	78	87.362	ENSMALG00000008938	hdlbpb	95	87.362	Monopterus_albus
ENSGMOG00000004522	hdlbpb	78	87.520	ENSNBRG00000002236	hdlbpb	95	87.520	Neolamprologus_brichardi
ENSGMOG00000004522	hdlbpb	78	87.244	ENSONIG00000009211	hdlbpb	95	87.244	Oreochromis_niloticus
ENSGMOG00000004522	hdlbpb	78	87.163	ENSORLG00000006581	hdlbpb	96	86.741	Oryzias_latipes
ENSGMOG00000004522	hdlbpb	78	87.322	ENSORLG00020010012	hdlbpb	95	87.322	Oryzias_latipes_hni
ENSGMOG00000004522	hdlbpb	78	87.322	ENSORLG00015006863	hdlbpb	95	87.322	Oryzias_latipes_hsok
ENSGMOG00000004522	hdlbpb	78	87.322	ENSOMEG00000011131	hdlbpb	97	87.322	Oryzias_melastigma
ENSGMOG00000004522	hdlbpb	78	85.103	ENSPKIG00000005966	hdlbpb	96	85.103	Paramormyrops_kingsleyae
ENSGMOG00000004522	hdlbpb	69	84.211	ENSPMGG00000019853	hdlbpb	99	84.211	Periophthalmus_magnuspinnatus
ENSGMOG00000004522	hdlbpb	73	79.310	ENSPMAG00000002131	hdlbpb	99	79.310	Petromyzon_marinus
ENSGMOG00000004522	hdlbpb	63	64.444	ENSPMAG00000000249	-	81	63.684	Petromyzon_marinus
ENSGMOG00000004522	hdlbpb	78	86.854	ENSPFOG00000008755	hdlbpb	95	86.854	Poecilia_formosa
ENSGMOG00000004522	hdlbpb	78	87.520	ENSPLAG00000007055	hdlbpb	95	87.520	Poecilia_latipinna
ENSGMOG00000004522	hdlbpb	78	87.520	ENSPMEG00000001952	hdlbpb	95	87.520	Poecilia_mexicana
ENSGMOG00000004522	hdlbpb	78	87.520	ENSPREG00000012848	hdlbpb	95	87.520	Poecilia_reticulata
ENSGMOG00000004522	hdlbpb	78	87.362	ENSPNYG00000022467	hdlbpb	97	87.362	Pundamilia_nyererei
ENSGMOG00000004522	hdlbpb	79	84.044	ENSPNAG00000011104	hdlbpb	96	84.044	Pygocentrus_nattereri
ENSGMOG00000004522	hdlbpb	79	85.308	ENSSFOG00015023199	hdlbpb	96	85.308	Scleropages_formosus
ENSGMOG00000004522	hdlbpb	78	87.836	ENSSMAG00000008790	hdlbpb	95	87.836	Scophthalmus_maximus
ENSGMOG00000004522	hdlbpb	78	88.310	ENSSDUG00000020694	hdlbpb	95	88.310	Seriola_dumerili
ENSGMOG00000004522	hdlbpb	78	88.310	ENSSLDG00000020807	hdlbpb	95	88.310	Seriola_lalandi_dorsalis
ENSGMOG00000004522	hdlbpb	76	81.775	ENSSPUG00000018688	-	96	81.775	Sphenodon_punctatus
ENSGMOG00000004522	hdlbpb	78	88.310	ENSSPAG00000016969	hdlbpb	95	88.310	Stegastes_partitus
ENSGMOG00000004522	hdlbpb	73	87.204	ENSTRUG00000012888	hdlbpb	95	87.204	Takifugu_rubripes
ENSGMOG00000004522	hdlbpb	78	87.736	ENSTNIG00000002555	hdlbpb	95	87.736	Tetraodon_nigroviridis
ENSGMOG00000004522	hdlbpb	76	83.412	ENSXCOG00000001797	hdlbpb	95	83.412	Xiphophorus_couchianus
ENSGMOG00000004522	hdlbpb	78	87.204	ENSXMAG00000015633	hdlbpb	95	87.204	Xiphophorus_maculatus