EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000004549 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: si:dkey-85a20.4
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 19098 bases
Position: chrGeneScaffold_1260:162449-181546
Accession: ZDB-GENE-090313-347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000004893	SpoU_methylase	PF00588.19	7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000005035	-	4089	-	ENSGMOP00000004893	1363 (aa)	-	UPI00023F06F4

Gene Model

Click here to download ENSGMOG00000004549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000004549's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000004549	si:dkey-85a20.4	99	43.206	ENSG00000059588	TARBP1	84	43.278	Homo_sapiens
ENSGMOG00000004549	si:dkey-85a20.4	99	65.131	ENSAPOG00000016419	si:dkey-85a20.4	86	65.131	Acanthochromis_polyacanthus
ENSGMOG00000004549	si:dkey-85a20.4	98	42.971	ENSAMEG00000003359	TARBP1	99	42.867	Ailuropoda_melanoleuca
ENSGMOG00000004549	si:dkey-85a20.4	99	64.614	ENSATEG00000020266	si:dkey-85a20.4	86	64.614	Anabas_testudineus
ENSGMOG00000004549	si:dkey-85a20.4	98	43.228	ENSAPLG00000007666	TARBP1	99	43.609	Anas_platyrhynchos
ENSGMOG00000004549	si:dkey-85a20.4	98	39.752	ENSACAG00000001142	TARBP1	86	39.586	Anolis_carolinensis
ENSGMOG00000004549	si:dkey-85a20.4	99	42.366	ENSANAG00000022031	TARBP1	86	42.294	Aotus_nancymaae
ENSGMOG00000004549	si:dkey-85a20.4	98	43.188	ENSBTAG00000004517	TARBP1	81	50.383	Bos_taurus
ENSGMOG00000004549	si:dkey-85a20.4	99	43.350	ENSCJAG00000018155	TARBP1	84	43.278	Callithrix_jacchus
ENSGMOG00000004549	si:dkey-85a20.4	98	43.403	ENSCAFG00000011533	TARBP1	95	43.331	Canis_familiaris
ENSGMOG00000004549	si:dkey-85a20.4	98	43.249	ENSCAFG00020027141	TARBP1	83	43.249	Canis_lupus_dingo
ENSGMOG00000004549	si:dkey-85a20.4	98	43.655	ENSCHIG00000011437	TARBP1	83	43.655	Capra_hircus
ENSGMOG00000004549	si:dkey-85a20.4	94	43.171	ENSTSYG00000010382	TARBP1	96	43.020	Carlito_syrichta
ENSGMOG00000004549	si:dkey-85a20.4	92	40.867	ENSCAPG00000010831	TARBP1	99	40.789	Cavia_aperea
ENSGMOG00000004549	si:dkey-85a20.4	98	43.962	ENSCPOG00000013995	TARBP1	85	43.890	Cavia_porcellus
ENSGMOG00000004549	si:dkey-85a20.4	95	49.921	ENSCCAG00000037278	TARBP1	83	49.763	Cebus_capucinus
ENSGMOG00000004549	si:dkey-85a20.4	99	42.826	ENSCATG00000011754	TARBP1	84	42.755	Cercocebus_atys
ENSGMOG00000004549	si:dkey-85a20.4	94	42.825	ENSCLAG00000003655	TARBP1	96	42.868	Chinchilla_lanigera
ENSGMOG00000004549	si:dkey-85a20.4	93	43.128	ENSCSAG00000010100	TARBP1	100	43.052	Chlorocebus_sabaeus
ENSGMOG00000004549	si:dkey-85a20.4	91	42.146	ENSCPBG00000005587	TARBP1	81	48.555	Chrysemys_picta_bellii
ENSGMOG00000004549	si:dkey-85a20.4	99	42.950	ENSCANG00000034343	TARBP1	99	42.878	Colobus_angolensis_palliatus
ENSGMOG00000004549	si:dkey-85a20.4	98	43.280	ENSCGRG00001016690	Tarbp1	85	43.208	Cricetulus_griseus_chok1gshd
ENSGMOG00000004549	si:dkey-85a20.4	98	43.280	ENSCGRG00000016893	Tarbp1	92	43.208	Cricetulus_griseus_crigri
ENSGMOG00000004549	si:dkey-85a20.4	99	58.393	ENSCSEG00000005255	si:dkey-85a20.4	87	60.123	Cynoglossus_semilaevis
ENSGMOG00000004549	si:dkey-85a20.4	98	57.536	ENSDARG00000079055	si:dkey-85a20.4	99	66.893	Danio_rerio
ENSGMOG00000004549	si:dkey-85a20.4	98	43.588	ENSDNOG00000008637	TARBP1	82	43.516	Dasypus_novemcinctus
ENSGMOG00000004549	si:dkey-85a20.4	94	44.051	ENSDORG00000007984	Tarbp1	100	43.825	Dipodomys_ordii
ENSGMOG00000004549	si:dkey-85a20.4	98	43.497	ENSEASG00005000252	TARBP1	84	43.394	Equus_asinus_asinus
ENSGMOG00000004549	si:dkey-85a20.4	98	43.750	ENSECAG00000023673	TARBP1	82	45.961	Equus_caballus
ENSGMOG00000004549	si:dkey-85a20.4	99	60.882	ENSELUG00000012193	si:dkey-85a20.4	86	60.740	Esox_lucius
ENSGMOG00000004549	si:dkey-85a20.4	98	41.168	ENSFCAG00000014183	TARBP1	83	41.096	Felis_catus
ENSGMOG00000004549	si:dkey-85a20.4	94	43.030	ENSFALG00000013565	TARBP1	99	42.675	Ficedula_albicollis
ENSGMOG00000004549	si:dkey-85a20.4	93	42.489	ENSFDAG00000001308	TARBP1	99	42.640	Fukomys_damarensis
ENSGMOG00000004549	si:dkey-85a20.4	95	65.842	ENSFHEG00000007565	si:dkey-85a20.4	85	65.842	Fundulus_heteroclitus
ENSGMOG00000004549	si:dkey-85a20.4	98	42.282	ENSGALG00000011000	TARBP1	86	41.977	Gallus_gallus
ENSGMOG00000004549	si:dkey-85a20.4	99	61.325	ENSGAFG00000007387	si:dkey-85a20.4	85	61.111	Gambusia_affinis
ENSGMOG00000004549	si:dkey-85a20.4	100	64.880	ENSGACG00000005865	si:dkey-85a20.4	100	64.880	Gasterosteus_aculeatus
ENSGMOG00000004549	si:dkey-85a20.4	98	44.718	ENSGAGG00000012102	TARBP1	89	44.178	Gopherus_agassizii
ENSGMOG00000004549	si:dkey-85a20.4	99	41.912	ENSGGOG00000022879	TARBP1	99	41.984	Gorilla_gorilla
ENSGMOG00000004549	si:dkey-85a20.4	99	64.281	ENSHBUG00000008877	si:dkey-85a20.4	86	64.656	Haplochromis_burtoni
ENSGMOG00000004549	si:dkey-85a20.4	98	43.529	ENSHGLG00000011592	TARBP1	85	43.456	Heterocephalus_glaber_female
ENSGMOG00000004549	si:dkey-85a20.4	98	43.623	ENSHGLG00100015169	TARBP1	93	43.551	Heterocephalus_glaber_male
ENSGMOG00000004549	si:dkey-85a20.4	98	54.978	ENSIPUG00000005249	si:dkey-85a20.4	83	54.618	Ictalurus_punctatus
ENSGMOG00000004549	si:dkey-85a20.4	97	43.494	ENSSTOG00000032291	TARBP1	96	43.421	Ictidomys_tridecemlineatus
ENSGMOG00000004549	si:dkey-85a20.4	98	41.817	ENSJJAG00000017840	Tarbp1	93	41.973	Jaculus_jaculus
ENSGMOG00000004549	si:dkey-85a20.4	81	65.625	ENSKMAG00000017546	si:dkey-85a20.4	75	64.557	Kryptolebias_marmoratus
ENSGMOG00000004549	si:dkey-85a20.4	80	66.535	ENSLBEG00000012132	si:dkey-85a20.4	78	66.579	Labrus_bergylta
ENSGMOG00000004549	si:dkey-85a20.4	99	42.867	ENSLACG00000004337	TARBP1	85	42.867	Latimeria_chalumnae
ENSGMOG00000004549	si:dkey-85a20.4	99	54.827	ENSLOCG00000016214	si:dkey-85a20.4	85	54.748	Lepisosteus_oculatus
ENSGMOG00000004549	si:dkey-85a20.4	98	42.816	ENSLAFG00000011394	TARBP1	86	42.713	Loxodonta_africana
ENSGMOG00000004549	si:dkey-85a20.4	99	41.727	ENSMFAG00000041068	TARBP1	85	41.655	Macaca_fascicularis
ENSGMOG00000004549	si:dkey-85a20.4	99	41.655	ENSMMUG00000021703	TARBP1	84	41.583	Macaca_mulatta
ENSGMOG00000004549	si:dkey-85a20.4	99	42.950	ENSMNEG00000045002	TARBP1	84	42.878	Macaca_nemestrina
ENSGMOG00000004549	si:dkey-85a20.4	98	42.744	ENSMLEG00000044182	TARBP1	99	42.671	Mandrillus_leucophaeus
ENSGMOG00000004549	si:dkey-85a20.4	99	64.378	ENSMAMG00000021760	si:dkey-85a20.4	87	64.378	Mastacembelus_armatus
ENSGMOG00000004549	si:dkey-85a20.4	99	63.997	ENSMZEG00005005751	si:dkey-85a20.4	86	64.372	Maylandia_zebra
ENSGMOG00000004549	si:dkey-85a20.4	98	43.642	ENSMAUG00000020968	Tarbp1	85	43.569	Mesocricetus_auratus
ENSGMOG00000004549	si:dkey-85a20.4	89	66.169	ENSMICG00000015280	TARBP1	79	66.169	Microcebus_murinus
ENSGMOG00000004549	si:dkey-85a20.4	98	44.380	ENSMOCG00000004128	Tarbp1	85	44.380	Microtus_ochrogaster
ENSGMOG00000004549	si:dkey-85a20.4	99	62.222	ENSMMOG00000007795	si:dkey-85a20.4	85	62.222	Mola_mola
ENSGMOG00000004549	si:dkey-85a20.4	98	42.753	ENSMODG00000008504	TARBP1	82	42.680	Monodelphis_domestica
ENSGMOG00000004549	si:dkey-85a20.4	98	63.471	ENSMALG00000002916	si:dkey-85a20.4	85	63.847	Monopterus_albus
ENSGMOG00000004549	si:dkey-85a20.4	99	43.360	MGP_CAROLIEiJ_G0031729	Tarbp1	80	58.029	Mus_caroli
ENSGMOG00000004549	si:dkey-85a20.4	98	43.497	ENSMUSG00000090290	Tarbp1	85	43.425	Mus_musculus
ENSGMOG00000004549	si:dkey-85a20.4	98	43.908	MGP_PahariEiJ_G0023326	Tarbp1	85	43.836	Mus_pahari
ENSGMOG00000004549	si:dkey-85a20.4	98	43.931	MGP_SPRETEiJ_G0032846	Tarbp1	85	43.858	Mus_spretus
ENSGMOG00000004549	si:dkey-85a20.4	90	44.006	ENSMPUG00000002802	TARBP1	99	43.927	Mustela_putorius_furo
ENSGMOG00000004549	si:dkey-85a20.4	98	43.218	ENSMLUG00000002414	TARBP1	99	43.218	Myotis_lucifugus
ENSGMOG00000004549	si:dkey-85a20.4	99	43.350	ENSNLEG00000002518	TARBP1	84	43.350	Nomascus_leucogenys
ENSGMOG00000004549	si:dkey-85a20.4	80	50.489	ENSOPRG00000013822	TARBP1	67	50.326	Ochotona_princeps
ENSGMOG00000004549	si:dkey-85a20.4	99	42.960	ENSODEG00000005238	TARBP1	88	42.888	Octodon_degus
ENSGMOG00000004549	si:dkey-85a20.4	99	64.155	ENSONIG00000009789	si:dkey-85a20.4	99	64.407	Oreochromis_niloticus
ENSGMOG00000004549	si:dkey-85a20.4	98	43.642	ENSOCUG00000017418	TARBP1	83	43.538	Oryctolagus_cuniculus
ENSGMOG00000004549	si:dkey-85a20.4	99	60.658	ENSORLG00000010529	si:dkey-85a20.4	85	60.845	Oryzias_latipes
ENSGMOG00000004549	si:dkey-85a20.4	99	60.372	ENSORLG00020019264	si:dkey-85a20.4	85	60.558	Oryzias_latipes_hni
ENSGMOG00000004549	si:dkey-85a20.4	99	60.157	ENSORLG00015003276	si:dkey-85a20.4	85	60.344	Oryzias_latipes_hsok
ENSGMOG00000004549	si:dkey-85a20.4	98	42.764	ENSOGAG00000002379	TARBP1	83	42.692	Otolemur_garnettii
ENSGMOG00000004549	si:dkey-85a20.4	98	43.605	ENSOARG00000003434	TARBP1	90	43.605	Ovis_aries
ENSGMOG00000004549	si:dkey-85a20.4	99	43.278	ENSPPAG00000028097	TARBP1	99	43.350	Pan_paniscus
ENSGMOG00000004549	si:dkey-85a20.4	98	41.540	ENSPPRG00000013561	TARBP1	87	41.467	Panthera_pardus
ENSGMOG00000004549	si:dkey-85a20.4	97	42.482	ENSPTIG00000009281	TARBP1	99	42.409	Panthera_tigris_altaica
ENSGMOG00000004549	si:dkey-85a20.4	99	43.278	ENSPTRG00000002124	TARBP1	84	43.206	Pan_troglodytes
ENSGMOG00000004549	si:dkey-85a20.4	99	42.950	ENSPANG00000021933	TARBP1	84	42.878	Papio_anubis
ENSGMOG00000004549	si:dkey-85a20.4	99	58.304	ENSPKIG00000016716	si:dkey-85a20.4	84	58.304	Paramormyrops_kingsleyae
ENSGMOG00000004549	si:dkey-85a20.4	93	43.856	ENSPSIG00000010699	TARBP1	99	43.779	Pelodiscus_sinensis
ENSGMOG00000004549	si:dkey-85a20.4	98	43.673	ENSPEMG00000006888	Tarbp1	90	43.601	Peromyscus_maniculatus_bairdii
ENSGMOG00000004549	si:dkey-85a20.4	86	67.662	ENSPCIG00000029710	TARBP1	81	67.662	Phascolarctos_cinereus
ENSGMOG00000004549	si:dkey-85a20.4	99	61.095	ENSPFOG00000013020	si:dkey-85a20.4	99	60.953	Poecilia_formosa
ENSGMOG00000004549	si:dkey-85a20.4	99	61.325	ENSPLAG00000006044	si:dkey-85a20.4	85	61.182	Poecilia_latipinna
ENSGMOG00000004549	si:dkey-85a20.4	99	61.099	ENSPMEG00000017857	si:dkey-85a20.4	85	60.956	Poecilia_mexicana
ENSGMOG00000004549	si:dkey-85a20.4	99	61.325	ENSPREG00000022753	si:dkey-85a20.4	85	61.182	Poecilia_reticulata
ENSGMOG00000004549	si:dkey-85a20.4	92	41.832	ENSPPYG00000000102	TARBP1	82	41.746	Pongo_abelii
ENSGMOG00000004549	si:dkey-85a20.4	75	78.082	ENSPCAG00000004808	TARBP1	65	78.082	Procavia_capensis
ENSGMOG00000004549	si:dkey-85a20.4	98	41.800	ENSPCOG00000005666	TARBP1	83	41.509	Propithecus_coquereli
ENSGMOG00000004549	si:dkey-85a20.4	93	60.274	ENSPVAG00000014798	TARBP1	80	60.339	Pteropus_vampyrus
ENSGMOG00000004549	si:dkey-85a20.4	99	61.632	ENSPNYG00000019135	si:dkey-85a20.4	85	61.649	Pundamilia_nyererei
ENSGMOG00000004549	si:dkey-85a20.4	99	42.283	ENSRNOG00000053574	Tarbp1	86	42.211	Rattus_norvegicus
ENSGMOG00000004549	si:dkey-85a20.4	99	41.109	ENSRBIG00000043362	TARBP1	92	40.677	Rhinopithecus_bieti
ENSGMOG00000004549	si:dkey-85a20.4	99	43.165	ENSRROG00000029527	TARBP1	87	43.022	Rhinopithecus_roxellana
ENSGMOG00000004549	si:dkey-85a20.4	98	43.065	ENSSBOG00000034503	TARBP1	96	43.210	Saimiri_boliviensis_boliviensis
ENSGMOG00000004549	si:dkey-85a20.4	98	43.251	ENSSHAG00000000013	TARBP1	99	43.179	Sarcophilus_harrisii
ENSGMOG00000004549	si:dkey-85a20.4	98	57.426	ENSSFOG00015002660	si:dkey-85a20.4	97	58.296	Scleropages_formosus
ENSGMOG00000004549	si:dkey-85a20.4	99	64.806	ENSSMAG00000007081	si:dkey-85a20.4	85	64.947	Scophthalmus_maximus
ENSGMOG00000004549	si:dkey-85a20.4	100	63.585	ENSSDUG00000023566	si:dkey-85a20.4	86	63.514	Seriola_dumerili
ENSGMOG00000004549	si:dkey-85a20.4	99	66.951	ENSSLDG00000020200	si:dkey-85a20.4	86	66.880	Seriola_lalandi_dorsalis
ENSGMOG00000004549	si:dkey-85a20.4	89	53.303	ENSSARG00000012207	TARBP1	76	53.075	Sorex_araneus
ENSGMOG00000004549	si:dkey-85a20.4	99	42.221	ENSSPUG00000015364	TARBP1	86	42.221	Sphenodon_punctatus
ENSGMOG00000004549	si:dkey-85a20.4	99	65.960	ENSSPAG00000007213	si:dkey-85a20.4	86	65.960	Stegastes_partitus
ENSGMOG00000004549	si:dkey-85a20.4	95	49.432	ENSSSCG00000010160	TARBP1	82	49.432	Sus_scrofa
ENSGMOG00000004549	si:dkey-85a20.4	94	42.675	ENSTGUG00000010214	TARBP1	99	42.600	Taeniopygia_guttata
ENSGMOG00000004549	si:dkey-85a20.4	98	62.408	ENSTNIG00000016586	si:dkey-85a20.4	99	62.198	Tetraodon_nigroviridis
ENSGMOG00000004549	si:dkey-85a20.4	93	39.422	ENSTTRG00000008707	TARBP1	83	39.422	Tursiops_truncatus
ENSGMOG00000004549	si:dkey-85a20.4	95	42.878	ENSUMAG00000006730	TARBP1	98	42.846	Ursus_maritimus
ENSGMOG00000004549	si:dkey-85a20.4	75	72.000	ENSVPAG00000007665	TARBP1	73	72.000	Vicugna_pacos
ENSGMOG00000004549	si:dkey-85a20.4	98	43.239	ENSVVUG00000007460	TARBP1	98	44.981	Vulpes_vulpes
ENSGMOG00000004549	si:dkey-85a20.4	98	40.288	ENSXETG00000016224	tarbp1	99	40.302	Xenopus_tropicalis
ENSGMOG00000004549	si:dkey-85a20.4	94	63.165	ENSXCOG00000011779	si:dkey-85a20.4	97	63.165	Xiphophorus_couchianus
ENSGMOG00000004549	si:dkey-85a20.4	76	59.065	ENSXMAG00000009600	si:dkey-85a20.4	100	59.065	Xiphophorus_maculatus