EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000004656 (Gene tree)
Gene ID: -
Gene Symbol: toe1
Alias: si:dkey-40i22.3
Full Name: target of EGR1%2C exonuclease
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 4354 bases
Position: chrGeneScaffold_400:5713-10066
Accession: ZDB-GENE-070912-533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000004953	zf-CCCH	PF00642.24	0.00027	1	1
ENSGMOP00000004953	CAF1	PF04857.20	4e-88	1	2
ENSGMOP00000004953	CAF1	PF04857.20	4e-88	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000005097	-	1353	-	ENSGMOP00000004953	451 (aa)	-	UPI00023F089F

Gene Model

Click here to download ENSGMOG00000004656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000004656's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000004656	toe1	97	51.915	ENSG00000132773	TOE1	93	52.621	Homo_sapiens
ENSGMOG00000004656	toe1	100	64.510	ENSAPOG00000010450	toe1	99	63.922	Acanthochromis_polyacanthus
ENSGMOG00000004656	toe1	97	53.291	ENSAMEG00000013576	TOE1	93	53.766	Ailuropoda_melanoleuca
ENSGMOG00000004656	toe1	100	64.609	ENSACIG00000004175	toe1	99	64.609	Amphilophus_citrinellus
ENSGMOG00000004656	toe1	100	60.728	ENSAOCG00000022922	toe1	86	82.951	Amphiprion_ocellaris
ENSGMOG00000004656	toe1	100	60.920	ENSAPEG00000005572	toe1	86	83.279	Amphiprion_percula
ENSGMOG00000004656	toe1	100	60.234	ENSATEG00000008973	toe1	99	61.673	Anabas_testudineus
ENSGMOG00000004656	toe1	81	64.725	ENSACAG00000015161	TOE1	69	64.935	Anolis_carolinensis
ENSGMOG00000004656	toe1	99	45.511	ENSANAG00000032328	-	85	56.889	Aotus_nancymaae
ENSGMOG00000004656	toe1	99	51.983	ENSANAG00000023815	-	85	69.725	Aotus_nancymaae
ENSGMOG00000004656	toe1	100	60.227	ENSACLG00000021437	toe1	73	82.295	Astatotilapia_calliptera
ENSGMOG00000004656	toe1	100	59.878	ENSAMXG00000031029	toe1	97	60.861	Astyanax_mexicanus
ENSGMOG00000004656	toe1	97	51.230	ENSBTAG00000011243	TOE1	70	64.238	Bos_taurus
ENSGMOG00000004656	toe1	94	33.850	WBGene00013265	parn-2	84	33.113	Caenorhabditis_elegans
ENSGMOG00000004656	toe1	99	50.418	ENSCJAG00000004716	TOE1	93	49.792	Callithrix_jacchus
ENSGMOG00000004656	toe1	97	52.966	ENSCAFG00000004603	TOE1	93	53.236	Canis_familiaris
ENSGMOG00000004656	toe1	97	52.966	ENSCAFG00020016716	TOE1	93	53.236	Canis_lupus_dingo
ENSGMOG00000004656	toe1	97	53.445	ENSCHIG00000026678	TOE1	93	53.638	Capra_hircus
ENSGMOG00000004656	toe1	97	52.842	ENSTSYG00000011320	TOE1	85	70.642	Carlito_syrichta
ENSGMOG00000004656	toe1	71	49.858	ENSCAPG00000003952	TOE1	100	49.575	Cavia_aperea
ENSGMOG00000004656	toe1	99	54.298	ENSCPOG00000036595	TOE1	93	54.298	Cavia_porcellus
ENSGMOG00000004656	toe1	99	51.255	ENSCCAG00000030245	TOE1	85	70.642	Cebus_capucinus
ENSGMOG00000004656	toe1	97	52.128	ENSCATG00000038458	TOE1	86	70.642	Cercocebus_atys
ENSGMOG00000004656	toe1	99	54.927	ENSCLAG00000003906	TOE1	93	54.088	Chinchilla_lanigera
ENSGMOG00000004656	toe1	97	52.553	ENSCSAG00000001213	TOE1	93	52.941	Chlorocebus_sabaeus
ENSGMOG00000004656	toe1	99	52.401	ENSCHOG00000004270	TOE1	93	53.445	Choloepus_hoffmanni
ENSGMOG00000004656	toe1	84	65.347	ENSCPBG00000005398	TOE1	67	65.049	Chrysemys_picta_bellii
ENSGMOG00000004656	toe1	98	34.756	ENSCING00000003872	-	98	35.052	Ciona_intestinalis
ENSGMOG00000004656	toe1	99	34.927	ENSCSAVG00000004594	-	99	34.927	Ciona_savignyi
ENSGMOG00000004656	toe1	97	52.017	ENSCANG00000037540	TOE1	93	52.411	Colobus_angolensis_palliatus
ENSGMOG00000004656	toe1	99	52.292	ENSCGRG00001022323	Toe1	93	52.292	Cricetulus_griseus_chok1gshd
ENSGMOG00000004656	toe1	99	52.292	ENSCGRG00000004377	Toe1	93	52.292	Cricetulus_griseus_crigri
ENSGMOG00000004656	toe1	100	56.952	ENSCSEG00000021445	toe1	74	80.328	Cynoglossus_semilaevis
ENSGMOG00000004656	toe1	100	62.897	ENSCVAG00000006577	toe1	99	62.376	Cyprinodon_variegatus
ENSGMOG00000004656	toe1	100	59.627	ENSDARG00000077544	toe1	98	59.627	Danio_rerio
ENSGMOG00000004656	toe1	99	52.720	ENSDNOG00000015596	TOE1	90	52.720	Dasypus_novemcinctus
ENSGMOG00000004656	toe1	97	52.211	ENSDORG00000007153	Toe1	93	52.697	Dipodomys_ordii
ENSGMOG00000004656	toe1	99	51.458	ENSETEG00000013367	TOE1	97	51.458	Echinops_telfairi
ENSGMOG00000004656	toe1	91	36.009	ENSEBUG00000000655	toe1	60	43.796	Eptatretus_burgeri
ENSGMOG00000004656	toe1	92	52.477	ENSEASG00005004198	TOE1	88	52.477	Equus_asinus_asinus
ENSGMOG00000004656	toe1	97	53.731	ENSECAG00000023204	TOE1	93	54.202	Equus_caballus
ENSGMOG00000004656	toe1	99	53.975	ENSEEUG00000015402	TOE1	93	53.992	Erinaceus_europaeus
ENSGMOG00000004656	toe1	100	58.743	ENSELUG00000012307	toe1	72	76.721	Esox_lucius
ENSGMOG00000004656	toe1	97	53.178	ENSFCAG00000038191	TOE1	93	53.653	Felis_catus
ENSGMOG00000004656	toe1	89	46.761	ENSFALG00000005017	TOE1	98	46.559	Ficedula_albicollis
ENSGMOG00000004656	toe1	97	54.194	ENSFDAG00000019031	TOE1	93	54.237	Fukomys_damarensis
ENSGMOG00000004656	toe1	100	60.853	ENSFHEG00000021893	toe1	83	80.656	Fundulus_heteroclitus
ENSGMOG00000004656	toe1	84	62.951	ENSGALG00000010228	TOE1	70	62.951	Gallus_gallus
ENSGMOG00000004656	toe1	100	62.253	ENSGAFG00000013948	toe1	99	61.886	Gambusia_affinis
ENSGMOG00000004656	toe1	100	65.971	ENSGACG00000014339	toe1	91	77.778	Gasterosteus_aculeatus
ENSGMOG00000004656	toe1	99	48.658	ENSGAGG00000023228	TOE1	73	65.696	Gopherus_agassizii
ENSGMOG00000004656	toe1	97	51.915	ENSGGOG00000003290	TOE1	85	70.642	Gorilla_gorilla
ENSGMOG00000004656	toe1	86	82.566	ENSHBUG00000012101	toe1	73	82.623	Haplochromis_burtoni
ENSGMOG00000004656	toe1	97	53.617	ENSHGLG00000003603	TOE1	93	53.878	Heterocephalus_glaber_female
ENSGMOG00000004656	toe1	97	53.617	ENSHGLG00100015361	TOE1	93	53.878	Heterocephalus_glaber_male
ENSGMOG00000004656	toe1	97	60.888	ENSHCOG00000016394	toe1	97	62.156	Hippocampus_comes
ENSGMOG00000004656	toe1	98	60.341	ENSIPUG00000002717	toe1	97	60.128	Ictalurus_punctatus
ENSGMOG00000004656	toe1	99	54.717	ENSSTOG00000010669	TOE1	93	54.717	Ictidomys_tridecemlineatus
ENSGMOG00000004656	toe1	62	65.678	ENSJJAG00000021743	Toe1	94	65.678	Jaculus_jaculus
ENSGMOG00000004656	toe1	99	61.765	ENSKMAG00000020891	toe1	81	82.450	Kryptolebias_marmoratus
ENSGMOG00000004656	toe1	100	60.421	ENSLBEG00000010456	toe1	99	60.421	Labrus_bergylta
ENSGMOG00000004656	toe1	99	58.084	ENSLOCG00000002852	toe1	99	58.283	Lepisosteus_oculatus
ENSGMOG00000004656	toe1	97	51.688	ENSLAFG00000017370	TOE1	58	63.455	Loxodonta_africana
ENSGMOG00000004656	toe1	97	52.128	ENSMFAG00000042312	TOE1	86	70.642	Macaca_fascicularis
ENSGMOG00000004656	toe1	97	52.119	ENSMMUG00000020081	TOE1	99	51.620	Macaca_mulatta
ENSGMOG00000004656	toe1	97	52.119	ENSMNEG00000032131	TOE1	93	52.311	Macaca_nemestrina
ENSGMOG00000004656	toe1	97	52.119	ENSMLEG00000028729	TOE1	93	52.731	Mandrillus_leucophaeus
ENSGMOG00000004656	toe1	100	60.264	ENSMAMG00000015291	toe1	99	60.566	Mastacembelus_armatus
ENSGMOG00000004656	toe1	100	59.091	ENSMZEG00005014305	toe1	73	82.295	Maylandia_zebra
ENSGMOG00000004656	toe1	88	49.886	ENSMGAG00000010387	TOE1	99	49.773	Meleagris_gallopavo
ENSGMOG00000004656	toe1	99	50.928	ENSMAUG00000022118	Toe1	93	52.292	Mesocricetus_auratus
ENSGMOG00000004656	toe1	73	51.368	ENSMICG00000032375	-	79	57.407	Microcebus_murinus
ENSGMOG00000004656	toe1	99	53.542	ENSMICG00000047305	-	93	54.088	Microcebus_murinus
ENSGMOG00000004656	toe1	97	52.110	ENSMOCG00000012917	Toe1	93	52.500	Microtus_ochrogaster
ENSGMOG00000004656	toe1	100	63.557	ENSMMOG00000020894	toe1	99	63.774	Mola_mola
ENSGMOG00000004656	toe1	99	50.205	ENSMODG00000002430	TOE1	99	50.103	Monodelphis_domestica
ENSGMOG00000004656	toe1	100	60.571	ENSMALG00000010017	toe1	84	82.295	Monopterus_albus
ENSGMOG00000004656	toe1	97	50.208	MGP_CAROLIEiJ_G0026342	Toe1	98	71.351	Mus_caroli
ENSGMOG00000004656	toe1	97	51.695	ENSMUSG00000028688	Toe1	98	70.811	Mus_musculus
ENSGMOG00000004656	toe1	97	50.208	MGP_PahariEiJ_G0028674	Toe1	98	70.811	Mus_pahari
ENSGMOG00000004656	toe1	97	51.271	MGP_SPRETEiJ_G0027314	Toe1	98	70.270	Mus_spretus
ENSGMOG00000004656	toe1	99	53.333	ENSMPUG00000013123	TOE1	93	52.917	Mustela_putorius_furo
ENSGMOG00000004656	toe1	99	54.927	ENSMLUG00000005649	TOE1	93	54.927	Myotis_lucifugus
ENSGMOG00000004656	toe1	100	66.805	ENSNBRG00000019107	toe1	99	66.805	Neolamprologus_brichardi
ENSGMOG00000004656	toe1	97	52.128	ENSNLEG00000014383	TOE1	85	71.101	Nomascus_leucogenys
ENSGMOG00000004656	toe1	73	71.338	ENSMEUG00000000629	-	86	71.795	Notamacropus_eugenii
ENSGMOG00000004656	toe1	97	52.643	ENSOPRG00000004057	TOE1	93	52.083	Ochotona_princeps
ENSGMOG00000004656	toe1	99	54.184	ENSODEG00000008239	TOE1	93	54.184	Octodon_degus
ENSGMOG00000004656	toe1	100	60.227	ENSONIG00000009053	toe1	73	82.295	Oreochromis_niloticus
ENSGMOG00000004656	toe1	99	44.276	ENSOANG00000011797	-	95	43.312	Ornithorhynchus_anatinus
ENSGMOG00000004656	toe1	99	53.669	ENSOCUG00000017503	TOE1	93	53.249	Oryctolagus_cuniculus
ENSGMOG00000004656	toe1	100	61.386	ENSORLG00000012609	toe1	75	81.967	Oryzias_latipes
ENSGMOG00000004656	toe1	100	60.516	ENSORLG00020006441	toe1	75	81.311	Oryzias_latipes_hni
ENSGMOG00000004656	toe1	100	63.294	ENSORLG00015001476	toe1	75	81.311	Oryzias_latipes_hsok
ENSGMOG00000004656	toe1	100	61.341	ENSOMEG00000014153	toe1	99	61.233	Oryzias_melastigma
ENSGMOG00000004656	toe1	99	41.791	ENSOGAG00000032761	-	93	41.791	Otolemur_garnettii
ENSGMOG00000004656	toe1	97	51.025	ENSOARG00000001561	TOE1	70	64.238	Ovis_aries
ENSGMOG00000004656	toe1	97	51.915	ENSPPAG00000043315	TOE1	85	70.642	Pan_paniscus
ENSGMOG00000004656	toe1	97	53.178	ENSPPRG00000011880	TOE1	93	53.653	Panthera_pardus
ENSGMOG00000004656	toe1	97	53.178	ENSPTIG00000008086	TOE1	93	53.653	Panthera_tigris_altaica
ENSGMOG00000004656	toe1	97	51.915	ENSPTRG00000000672	TOE1	85	70.642	Pan_troglodytes
ENSGMOG00000004656	toe1	97	52.119	ENSPANG00000012549	TOE1	91	52.311	Papio_anubis
ENSGMOG00000004656	toe1	99	60.132	ENSPKIG00000010811	toe1	96	59.912	Paramormyrops_kingsleyae
ENSGMOG00000004656	toe1	61	67.384	ENSPSIG00000010299	TOE1	98	67.384	Pelodiscus_sinensis
ENSGMOG00000004656	toe1	99	60.721	ENSPMGG00000020389	toe1	99	60.721	Periophthalmus_magnuspinnatus
ENSGMOG00000004656	toe1	99	52.807	ENSPEMG00000021892	Toe1	93	52.183	Peromyscus_maniculatus_bairdii
ENSGMOG00000004656	toe1	98	41.176	ENSPMAG00000004794	toe1	97	41.176	Petromyzon_marinus
ENSGMOG00000004656	toe1	99	51.125	ENSPCIG00000027569	TOE1	97	51.738	Phascolarctos_cinereus
ENSGMOG00000004656	toe1	100	61.297	ENSPFOG00000019517	toe1	99	62.500	Poecilia_formosa
ENSGMOG00000004656	toe1	100	61.493	ENSPLAG00000018228	toe1	99	62.698	Poecilia_latipinna
ENSGMOG00000004656	toe1	100	61.297	ENSPMEG00000019956	toe1	99	62.302	Poecilia_mexicana
ENSGMOG00000004656	toe1	97	51.915	ENSPPYG00000001414	TOE1	93	52.411	Pongo_abelii
ENSGMOG00000004656	toe1	99	52.731	ENSPCAG00000013351	TOE1	59	63.455	Procavia_capensis
ENSGMOG00000004656	toe1	99	53.249	ENSPCOG00000000982	TOE1	85	70.183	Propithecus_coquereli
ENSGMOG00000004656	toe1	90	50.448	ENSPVAG00000014998	TOE1	65	63.504	Pteropus_vampyrus
ENSGMOG00000004656	toe1	100	59.091	ENSPNYG00000019914	toe1	73	82.295	Pundamilia_nyererei
ENSGMOG00000004656	toe1	99	59.229	ENSPNAG00000021933	toe1	97	59.919	Pygocentrus_nattereri
ENSGMOG00000004656	toe1	97	52.137	ENSRNOG00000017561	Toe1	93	52.532	Rattus_norvegicus
ENSGMOG00000004656	toe1	97	52.017	ENSRBIG00000031463	TOE1	86	70.642	Rhinopithecus_bieti
ENSGMOG00000004656	toe1	97	52.017	ENSRROG00000026371	TOE1	86	70.642	Rhinopithecus_roxellana
ENSGMOG00000004656	toe1	99	46.025	ENSSBOG00000032639	-	91	43.958	Saimiri_boliviensis_boliviensis
ENSGMOG00000004656	toe1	99	52.697	ENSSBOG00000026044	-	85	70.642	Saimiri_boliviensis_boliviensis
ENSGMOG00000004656	toe1	97	49.785	ENSSHAG00000010201	TOE1	99	51.357	Sarcophilus_harrisii
ENSGMOG00000004656	toe1	100	61.783	ENSSFOG00015021182	toe1	97	61.456	Scleropages_formosus
ENSGMOG00000004656	toe1	82	54.054	ENSSMAG00000015322	toe1	71	77.273	Scophthalmus_maximus
ENSGMOG00000004656	toe1	100	60.962	ENSSDUG00000013278	toe1	99	60.577	Seriola_dumerili
ENSGMOG00000004656	toe1	100	61.923	ENSSLDG00000021979	toe1	99	61.923	Seriola_lalandi_dorsalis
ENSGMOG00000004656	toe1	99	50.373	ENSSPUG00000003464	TOE1	70	65.798	Sphenodon_punctatus
ENSGMOG00000004656	toe1	100	62.667	ENSSPAG00000009490	toe1	83	83.279	Stegastes_partitus
ENSGMOG00000004656	toe1	99	53.484	ENSSSCG00000003918	TOE1	93	52.459	Sus_scrofa
ENSGMOG00000004656	toe1	99	47.951	ENSTGUG00000007927	TOE1	99	48.649	Taeniopygia_guttata
ENSGMOG00000004656	toe1	100	63.039	ENSTRUG00000025603	toe1	99	63.039	Takifugu_rubripes
ENSGMOG00000004656	toe1	97	65.909	ENSTNIG00000017614	toe1	99	64.509	Tetraodon_nigroviridis
ENSGMOG00000004656	toe1	73	63.296	ENSTBEG00000017625	TOE1	67	63.869	Tupaia_belangeri
ENSGMOG00000004656	toe1	97	53.617	ENSTTRG00000008815	TOE1	93	53.669	Tursiops_truncatus
ENSGMOG00000004656	toe1	97	52.766	ENSUAMG00000017724	TOE1	93	53.249	Ursus_americanus
ENSGMOG00000004656	toe1	96	52.371	ENSUMAG00000024253	TOE1	99	52.802	Ursus_maritimus
ENSGMOG00000004656	toe1	97	53.814	ENSVPAG00000011731	TOE1	93	52.720	Vicugna_pacos
ENSGMOG00000004656	toe1	99	53.653	ENSVVUG00000007469	TOE1	88	53.653	Vulpes_vulpes
ENSGMOG00000004656	toe1	99	49.804	ENSXETG00000003534	toe1	99	48.431	Xenopus_tropicalis
ENSGMOG00000004656	toe1	100	63.265	ENSXCOG00000007796	toe1	99	62.551	Xiphophorus_couchianus
ENSGMOG00000004656	toe1	100	61.630	ENSXMAG00000011102	toe1	60	81.639	Xiphophorus_maculatus