EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000004677 (Gene tree)
Gene ID: -
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase-like 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 11369 bases
Position: chrGeneScaffold_3576:18880-30248
Accession: ZDB-GENE-040930-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000004958	RTC	PF01137.21	1.6e-58	1	1
ENSGMOP00000004958	RTC_insert	PF05189.13	2.4e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000005102	-	1116	-	ENSGMOP00000004958	372 (aa)	-	UPI00023F0909

Gene Model

Click here to download ENSGMOG00000004677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000004677's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000004677	rcl1	99	77.838	ENSG00000120158	RCL1	96	84.733	Homo_sapiens
ENSGMOG00000004677	rcl1	100	83.065	ENSAPOG00000015666	rcl1	100	83.065	Acanthochromis_polyacanthus
ENSGMOG00000004677	rcl1	99	79.189	ENSAMEG00000002631	RCL1	99	78.919	Ailuropoda_melanoleuca
ENSGMOG00000004677	rcl1	100	83.602	ENSACIG00000021195	rcl1	100	83.602	Amphilophus_citrinellus
ENSGMOG00000004677	rcl1	100	83.333	ENSAOCG00000002223	rcl1	100	83.333	Amphiprion_ocellaris
ENSGMOG00000004677	rcl1	100	83.602	ENSAPEG00000006905	rcl1	100	83.602	Amphiprion_percula
ENSGMOG00000004677	rcl1	100	80.645	ENSATEG00000020026	rcl1	100	80.645	Anabas_testudineus
ENSGMOG00000004677	rcl1	88	75.380	ENSAPLG00000006031	RCL1	100	75.380	Anas_platyrhynchos
ENSGMOG00000004677	rcl1	99	73.243	ENSACAG00000003640	RCL1	99	73.243	Anolis_carolinensis
ENSGMOG00000004677	rcl1	99	78.108	ENSANAG00000037372	RCL1	99	78.108	Aotus_nancymaae
ENSGMOG00000004677	rcl1	100	81.720	ENSACLG00000021724	rcl1	100	81.720	Astatotilapia_calliptera
ENSGMOG00000004677	rcl1	99	81.793	ENSAMXG00000033394	rcl1	99	81.793	Astyanax_mexicanus
ENSGMOG00000004677	rcl1	99	47.340	WBGene00022852	ZK1127.5	99	47.340	Caenorhabditis_elegans
ENSGMOG00000004677	rcl1	99	77.568	ENSCJAG00000011202	RCL1	99	77.297	Callithrix_jacchus
ENSGMOG00000004677	rcl1	99	78.919	ENSCAFG00000002091	RCL1	99	78.649	Canis_familiaris
ENSGMOG00000004677	rcl1	99	78.649	ENSCAFG00020000638	RCL1	77	78.649	Canis_lupus_dingo
ENSGMOG00000004677	rcl1	99	77.568	ENSCHIG00000012407	RCL1	99	77.297	Capra_hircus
ENSGMOG00000004677	rcl1	88	78.659	ENSTSYG00000009592	RCL1	97	81.319	Carlito_syrichta
ENSGMOG00000004677	rcl1	67	66.272	ENSCAPG00000013575	RCL1	100	66.272	Cavia_aperea
ENSGMOG00000004677	rcl1	99	78.378	ENSCPOG00000015354	RCL1	99	78.108	Cavia_porcellus
ENSGMOG00000004677	rcl1	99	78.108	ENSCCAG00000033505	RCL1	97	81.421	Cebus_capucinus
ENSGMOG00000004677	rcl1	99	77.568	ENSCATG00000034721	RCL1	97	80.769	Cercocebus_atys
ENSGMOG00000004677	rcl1	99	78.649	ENSCLAG00000007445	RCL1	99	78.378	Chinchilla_lanigera
ENSGMOG00000004677	rcl1	99	77.568	ENSCSAG00000008811	RCL1	99	77.297	Chlorocebus_sabaeus
ENSGMOG00000004677	rcl1	86	67.712	ENSCHOG00000007216	RCL1	99	67.712	Choloepus_hoffmanni
ENSGMOG00000004677	rcl1	99	75.881	ENSCPBG00000025481	RCL1	94	76.667	Chrysemys_picta_bellii
ENSGMOG00000004677	rcl1	99	62.432	ENSCING00000019565	-	98	62.432	Ciona_intestinalis
ENSGMOG00000004677	rcl1	99	77.568	ENSCANG00000027099	RCL1	99	77.297	Colobus_angolensis_palliatus
ENSGMOG00000004677	rcl1	99	77.838	ENSCGRG00001013748	Rcl1	99	77.568	Cricetulus_griseus_chok1gshd
ENSGMOG00000004677	rcl1	88	78.419	ENSCGRG00000005843	Rcl1	99	78.116	Cricetulus_griseus_crigri
ENSGMOG00000004677	rcl1	100	83.333	ENSCSEG00000000712	rcl1	98	83.333	Cynoglossus_semilaevis
ENSGMOG00000004677	rcl1	100	83.602	ENSCVAG00000011536	rcl1	100	83.602	Cyprinodon_variegatus
ENSGMOG00000004677	rcl1	99	80.926	ENSDARG00000038312	rcl1	100	80.926	Danio_rerio
ENSGMOG00000004677	rcl1	72	79.699	ENSDNOG00000019911	RCL1	100	81.019	Dasypus_novemcinctus
ENSGMOG00000004677	rcl1	99	78.378	ENSDORG00000015645	Rcl1	99	78.378	Dipodomys_ordii
ENSGMOG00000004677	rcl1	98	54.301	FBgn0020909	Rtc1	97	55.228	Drosophila_melanogaster
ENSGMOG00000004677	rcl1	88	53.659	ENSETEG00000014087	-	100	53.659	Echinops_telfairi
ENSGMOG00000004677	rcl1	99	54.865	ENSEBUG00000016621	-	99	54.865	Eptatretus_burgeri
ENSGMOG00000004677	rcl1	99	77.297	ENSEASG00005010653	RCL1	99	77.297	Equus_asinus_asinus
ENSGMOG00000004677	rcl1	99	77.568	ENSECAG00000015973	RCL1	99	77.297	Equus_caballus
ENSGMOG00000004677	rcl1	99	66.757	ENSEEUG00000009801	RCL1	99	66.757	Erinaceus_europaeus
ENSGMOG00000004677	rcl1	100	77.419	ENSELUG00000007353	rcl1	100	77.419	Esox_lucius
ENSGMOG00000004677	rcl1	99	78.649	ENSFCAG00000014557	RCL1	99	78.378	Felis_catus
ENSGMOG00000004677	rcl1	100	68.817	ENSFALG00000010553	RCL1	98	68.817	Ficedula_albicollis
ENSGMOG00000004677	rcl1	88	78.049	ENSFDAG00000004209	RCL1	100	77.744	Fukomys_damarensis
ENSGMOG00000004677	rcl1	50	30.319	ENSFHEG00000002868	rtca	77	30.319	Fundulus_heteroclitus
ENSGMOG00000004677	rcl1	100	82.527	ENSFHEG00000011228	rcl1	100	82.527	Fundulus_heteroclitus
ENSGMOG00000004677	rcl1	99	73.514	ENSGALG00000015024	RCL1	99	73.514	Gallus_gallus
ENSGMOG00000004677	rcl1	100	83.333	ENSGAFG00000007257	rcl1	100	83.333	Gambusia_affinis
ENSGMOG00000004677	rcl1	100	81.720	ENSGACG00000017474	rcl1	100	81.720	Gasterosteus_aculeatus
ENSGMOG00000004677	rcl1	99	75.610	ENSGAGG00000003689	RCL1	99	75.610	Gopherus_agassizii
ENSGMOG00000004677	rcl1	99	77.568	ENSGGOG00000015041	RCL1	97	80.220	Gorilla_gorilla
ENSGMOG00000004677	rcl1	100	82.258	ENSHBUG00000001393	rcl1	100	82.258	Haplochromis_burtoni
ENSGMOG00000004677	rcl1	99	66.938	ENSHGLG00000005368	-	99	66.938	Heterocephalus_glaber_female
ENSGMOG00000004677	rcl1	99	78.108	ENSHGLG00000016452	RCL1	99	77.838	Heterocephalus_glaber_female
ENSGMOG00000004677	rcl1	99	68.022	ENSHGLG00100018010	-	99	68.022	Heterocephalus_glaber_male
ENSGMOG00000004677	rcl1	99	72.703	ENSHGLG00100008718	-	99	72.432	Heterocephalus_glaber_male
ENSGMOG00000004677	rcl1	100	80.645	ENSHCOG00000020170	rcl1	100	80.645	Hippocampus_comes
ENSGMOG00000004677	rcl1	99	82.289	ENSIPUG00000018054	RCL1	99	82.289	Ictalurus_punctatus
ENSGMOG00000004677	rcl1	99	78.108	ENSSTOG00000000023	RCL1	99	77.838	Ictidomys_tridecemlineatus
ENSGMOG00000004677	rcl1	99	77.838	ENSJJAG00000022803	-	99	77.568	Jaculus_jaculus
ENSGMOG00000004677	rcl1	99	68.378	ENSJJAG00000015632	-	99	68.378	Jaculus_jaculus
ENSGMOG00000004677	rcl1	54	59.406	ENSJJAG00000000764	-	98	59.406	Jaculus_jaculus
ENSGMOG00000004677	rcl1	100	80.914	ENSKMAG00000011946	rcl1	100	80.914	Kryptolebias_marmoratus
ENSGMOG00000004677	rcl1	100	79.570	ENSLBEG00000003957	rcl1	100	79.570	Labrus_bergylta
ENSGMOG00000004677	rcl1	92	73.761	ENSLACG00000004594	RCL1	100	77.329	Latimeria_chalumnae
ENSGMOG00000004677	rcl1	100	78.226	ENSLOCG00000010148	rcl1	98	78.226	Lepisosteus_oculatus
ENSGMOG00000004677	rcl1	99	77.027	ENSLAFG00000017495	RCL1	99	77.027	Loxodonta_africana
ENSGMOG00000004677	rcl1	99	77.568	ENSMFAG00000037906	RCL1	99	77.297	Macaca_fascicularis
ENSGMOG00000004677	rcl1	99	77.568	ENSMNEG00000012288	RCL1	97	80.769	Macaca_nemestrina
ENSGMOG00000004677	rcl1	99	77.568	ENSMLEG00000043088	RCL1	99	77.297	Mandrillus_leucophaeus
ENSGMOG00000004677	rcl1	100	83.602	ENSMAMG00000008311	rcl1	100	83.602	Mastacembelus_armatus
ENSGMOG00000004677	rcl1	100	81.720	ENSMZEG00005017292	rcl1	100	81.720	Maylandia_zebra
ENSGMOG00000004677	rcl1	58	73.636	ENSMGAG00000002245	RCL1	100	73.636	Meleagris_gallopavo
ENSGMOG00000004677	rcl1	58	80.093	ENSMAUG00000008922	Rcl1	100	80.093	Mesocricetus_auratus
ENSGMOG00000004677	rcl1	99	79.133	ENSMICG00000015562	RCL1	99	78.862	Microcebus_murinus
ENSGMOG00000004677	rcl1	99	77.568	ENSMOCG00000012145	Rcl1	99	77.297	Microtus_ochrogaster
ENSGMOG00000004677	rcl1	100	80.429	ENSMMOG00000021264	rcl1	100	80.429	Mola_mola
ENSGMOG00000004677	rcl1	95	75.852	ENSMODG00000015377	RCL1	93	75.852	Monodelphis_domestica
ENSGMOG00000004677	rcl1	100	81.720	ENSMALG00000018618	rcl1	100	81.720	Monopterus_albus
ENSGMOG00000004677	rcl1	99	77.838	MGP_CAROLIEiJ_G0022853	Rcl1	99	77.568	Mus_caroli
ENSGMOG00000004677	rcl1	99	77.297	ENSMUSG00000024785	Rcl1	99	77.027	Mus_musculus
ENSGMOG00000004677	rcl1	99	77.838	MGP_PahariEiJ_G0014346	Rcl1	100	79.532	Mus_pahari
ENSGMOG00000004677	rcl1	99	77.297	MGP_SPRETEiJ_G0023771	Rcl1	100	79.532	Mus_spretus
ENSGMOG00000004677	rcl1	99	78.919	ENSMPUG00000004998	RCL1	99	78.649	Mustela_putorius_furo
ENSGMOG00000004677	rcl1	99	78.378	ENSMLUG00000009654	RCL1	99	78.108	Myotis_lucifugus
ENSGMOG00000004677	rcl1	99	77.568	ENSNGAG00000015327	Rcl1	99	77.568	Nannospalax_galili
ENSGMOG00000004677	rcl1	92	78.717	ENSNBRG00000019854	rcl1	99	75.482	Neolamprologus_brichardi
ENSGMOG00000004677	rcl1	99	75.135	ENSNLEG00000008891	RCL1	99	75.135	Nomascus_leucogenys
ENSGMOG00000004677	rcl1	99	70.811	ENSMEUG00000007653	RCL1	99	70.811	Notamacropus_eugenii
ENSGMOG00000004677	rcl1	99	76.757	ENSOPRG00000010965	RCL1	99	76.757	Ochotona_princeps
ENSGMOG00000004677	rcl1	88	65.569	ENSODEG00000004151	RCL1	96	65.569	Octodon_degus
ENSGMOG00000004677	rcl1	100	82.258	ENSONIG00000003871	rcl1	100	82.258	Oreochromis_niloticus
ENSGMOG00000004677	rcl1	66	77.912	ENSOANG00000013193	-	98	77.912	Ornithorhynchus_anatinus
ENSGMOG00000004677	rcl1	99	77.838	ENSOCUG00000008161	RCL1	99	77.568	Oryctolagus_cuniculus
ENSGMOG00000004677	rcl1	100	81.452	ENSORLG00000010443	rcl1	100	81.452	Oryzias_latipes
ENSGMOG00000004677	rcl1	100	81.720	ENSORLG00020012211	rcl1	100	81.720	Oryzias_latipes_hni
ENSGMOG00000004677	rcl1	100	81.183	ENSORLG00015001122	rcl1	100	81.183	Oryzias_latipes_hsok
ENSGMOG00000004677	rcl1	100	82.796	ENSOMEG00000022976	rcl1	88	82.796	Oryzias_melastigma
ENSGMOG00000004677	rcl1	99	77.568	ENSOGAG00000007480	RCL1	99	77.297	Otolemur_garnettii
ENSGMOG00000004677	rcl1	99	77.568	ENSOARG00000013463	RCL1	99	77.297	Ovis_aries
ENSGMOG00000004677	rcl1	99	77.568	ENSPPAG00000037958	RCL1	99	77.297	Pan_paniscus
ENSGMOG00000004677	rcl1	99	77.838	ENSPPRG00000022645	RCL1	99	77.568	Panthera_pardus
ENSGMOG00000004677	rcl1	88	78.899	ENSPTIG00000019031	RCL1	100	80.556	Panthera_tigris_altaica
ENSGMOG00000004677	rcl1	99	77.297	ENSPTRG00000020743	RCL1	97	80.769	Pan_troglodytes
ENSGMOG00000004677	rcl1	99	77.568	ENSPANG00000025151	RCL1	99	77.297	Papio_anubis
ENSGMOG00000004677	rcl1	100	79.032	ENSPKIG00000021022	rcl1	100	79.032	Paramormyrops_kingsleyae
ENSGMOG00000004677	rcl1	88	77.204	ENSPSIG00000012302	RCL1	100	77.204	Pelodiscus_sinensis
ENSGMOG00000004677	rcl1	100	81.452	ENSPMGG00000024007	rcl1	100	81.452	Periophthalmus_magnuspinnatus
ENSGMOG00000004677	rcl1	99	77.838	ENSPEMG00000023275	Rcl1	99	77.568	Peromyscus_maniculatus_bairdii
ENSGMOG00000004677	rcl1	99	76.486	ENSPCIG00000000188	RCL1	99	76.486	Phascolarctos_cinereus
ENSGMOG00000004677	rcl1	100	83.065	ENSPFOG00000019682	rcl1	99	83.065	Poecilia_formosa
ENSGMOG00000004677	rcl1	100	83.065	ENSPLAG00000022354	rcl1	100	83.065	Poecilia_latipinna
ENSGMOG00000004677	rcl1	100	83.065	ENSPMEG00000008131	rcl1	100	83.065	Poecilia_mexicana
ENSGMOG00000004677	rcl1	100	82.527	ENSPREG00000008032	rcl1	100	82.527	Poecilia_reticulata
ENSGMOG00000004677	rcl1	99	77.568	ENSPPYG00000019244	RCL1	99	77.297	Pongo_abelii
ENSGMOG00000004677	rcl1	99	70.000	ENSPCAG00000001440	RCL1	99	70.000	Procavia_capensis
ENSGMOG00000004677	rcl1	99	78.108	ENSPCOG00000009611	RCL1	97	80.769	Propithecus_coquereli
ENSGMOG00000004677	rcl1	99	77.297	ENSPVAG00000015752	RCL1	99	77.027	Pteropus_vampyrus
ENSGMOG00000004677	rcl1	100	81.989	ENSPNYG00000012910	rcl1	100	81.989	Pundamilia_nyererei
ENSGMOG00000004677	rcl1	99	80.707	ENSPNAG00000028307	rcl1	91	80.707	Pygocentrus_nattereri
ENSGMOG00000004677	rcl1	99	77.027	ENSRNOG00000015491	Rcl1	99	76.757	Rattus_norvegicus
ENSGMOG00000004677	rcl1	99	77.297	ENSRBIG00000035818	RCL1	99	77.027	Rhinopithecus_bieti
ENSGMOG00000004677	rcl1	99	77.568	ENSRROG00000029781	RCL1	97	80.769	Rhinopithecus_roxellana
ENSGMOG00000004677	rcl1	97	36.413	YOL010W	-	96	36.413	Saccharomyces_cerevisiae
ENSGMOG00000004677	rcl1	99	77.838	ENSSBOG00000026369	RCL1	97	80.874	Saimiri_boliviensis_boliviensis
ENSGMOG00000004677	rcl1	89	77.341	ENSSHAG00000014086	RCL1	100	77.039	Sarcophilus_harrisii
ENSGMOG00000004677	rcl1	100	77.957	ENSSFOG00015023020	rcl1	100	77.957	Scleropages_formosus
ENSGMOG00000004677	rcl1	100	84.140	ENSSMAG00000019751	rcl1	86	84.140	Scophthalmus_maximus
ENSGMOG00000004677	rcl1	99	82.656	ENSSDUG00000006349	rcl1	99	82.656	Seriola_dumerili
ENSGMOG00000004677	rcl1	99	82.656	ENSSLDG00000022076	rcl1	99	82.656	Seriola_lalandi_dorsalis
ENSGMOG00000004677	rcl1	99	76.486	ENSSARG00000009260	RCL1	99	76.486	Sorex_araneus
ENSGMOG00000004677	rcl1	99	75.676	ENSSPUG00000016330	RCL1	99	75.676	Sphenodon_punctatus
ENSGMOG00000004677	rcl1	100	82.527	ENSSPAG00000018038	rcl1	100	82.527	Stegastes_partitus
ENSGMOG00000004677	rcl1	99	77.568	ENSSSCG00000005217	RCL1	82	77.568	Sus_scrofa
ENSGMOG00000004677	rcl1	99	71.774	ENSTGUG00000005138	RCL1	99	71.774	Taeniopygia_guttata
ENSGMOG00000004677	rcl1	100	81.720	ENSTRUG00000010493	rcl1	100	81.720	Takifugu_rubripes
ENSGMOG00000004677	rcl1	100	78.763	ENSTNIG00000013214	rcl1	99	78.763	Tetraodon_nigroviridis
ENSGMOG00000004677	rcl1	99	72.162	ENSTBEG00000016339	RCL1	99	72.162	Tupaia_belangeri
ENSGMOG00000004677	rcl1	99	77.838	ENSTTRG00000016525	RCL1	99	77.838	Tursiops_truncatus
ENSGMOG00000004677	rcl1	99	79.189	ENSUAMG00000005598	RCL1	99	80.625	Ursus_americanus
ENSGMOG00000004677	rcl1	88	78.963	ENSUMAG00000017890	RCL1	97	78.963	Ursus_maritimus
ENSGMOG00000004677	rcl1	88	78.354	ENSVPAG00000009188	RCL1	100	78.049	Vicugna_pacos
ENSGMOG00000004677	rcl1	88	79.939	ENSVVUG00000007304	RCL1	89	79.939	Vulpes_vulpes
ENSGMOG00000004677	rcl1	100	70.667	ENSXETG00000000592	rcl1	100	70.667	Xenopus_tropicalis
ENSGMOG00000004677	rcl1	100	83.065	ENSXCOG00000004922	rcl1	100	83.065	Xiphophorus_couchianus
ENSGMOG00000004677	rcl1	100	83.065	ENSXMAG00000022366	RCL1	100	83.065	Xiphophorus_maculatus