EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000004819 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 8147 bases
Position: chrGeneScaffold_79:77070-85216
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000005116	zf-CCHC_2	PF13696.6	6.4e-08	1	1
ENSGMOP00000005125	zf-CCHC_2	PF13696.6	1.2e-07	1	1
ENSGMOP00000005136	zf-CCHC_2	PF13696.6	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000005275	-	732	-	ENSGMOP00000005125	244 (aa)	-	UPI00023F0BC8
ENSGMOT00000005265	-	708	-	ENSGMOP00000005116	236 (aa)	-	UPI00023F0BC7
ENSGMOT00000005289	-	810	-	ENSGMOP00000005136	270 (aa)	-	UPI00023F0BC9

Gene Model

Click here to download ENSGMOG00000004819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000004819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000004819	-	90	60.000	ENSGMOG00000006417	-	98	59.545

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000004819	-	84	64.251	ENSAPOG00000015723	-	96	61.836	Acanthochromis_polyacanthus
ENSGMOG00000004819	-	75	55.435	ENSACIG00000015080	-	77	54.348	Amphilophus_citrinellus
ENSGMOG00000004819	-	86	65.094	ENSAOCG00000023269	-	93	63.333	Amphiprion_ocellaris
ENSGMOG00000004819	-	88	68.037	ENSATEG00000003539	-	93	67.130	Anabas_testudineus
ENSGMOG00000004819	-	86	60.190	ENSACLG00000010235	-	94	59.242	Astatotilapia_calliptera
ENSGMOG00000004819	-	84	42.060	ENSCING00000017248	-	99	41.702	Ciona_intestinalis
ENSGMOG00000004819	-	88	51.570	ENSCSAVG00000002639	-	92	50.673	Ciona_savignyi
ENSGMOG00000004819	-	83	59.512	ENSCSEG00000015861	-	86	59.512	Cynoglossus_semilaevis
ENSGMOG00000004819	-	100	50.633	ENSDARG00000115079	zgc:174353	85	50.633	Danio_rerio
ENSGMOG00000004819	-	100	50.211	ENSDARG00000110591	si:dkey-27d5.6	85	50.211	Danio_rerio
ENSGMOG00000004819	-	99	50.847	ENSDARG00000094196	si:dkey-27d5.10	84	50.847	Danio_rerio
ENSGMOG00000004819	-	100	50.211	ENSDARG00000113994	zgc:174354	85	50.211	Danio_rerio
ENSGMOG00000004819	-	100	49.789	ENSDARG00000111826	zgc:174354	85	49.789	Danio_rerio
ENSGMOG00000004819	-	99	50.000	ENSDARG00000088552	si:dkey-23f9.13	83	50.000	Danio_rerio
ENSGMOG00000004819	-	99	50.847	ENSDARG00000113889	zgc:174355	84	50.847	Danio_rerio
ENSGMOG00000004819	-	100	50.633	ENSDARG00000112365	zgc:174353	85	50.633	Danio_rerio
ENSGMOG00000004819	-	100	49.789	ENSDARG00000100754	CR450764.1	85	49.789	Danio_rerio
ENSGMOG00000004819	-	100	50.211	ENSDARG00000070812	si:ch211-156l18.6	85	50.211	Danio_rerio
ENSGMOG00000004819	-	100	49.789	ENSDARG00000094335	si:dkey-23f9.12	85	49.789	Danio_rerio
ENSGMOG00000004819	-	99	50.424	ENSDARG00000116389	CR450764.8	84	50.424	Danio_rerio
ENSGMOG00000004819	-	78	53.646	ENSELUG00000017972	-	85	54.348	Esox_lucius
ENSGMOG00000004819	-	91	65.179	ENSFHEG00000004408	-	95	64.286	Fundulus_heteroclitus
ENSGMOG00000004819	-	94	57.576	ENSGACG00000016781	-	94	57.576	Gasterosteus_aculeatus
ENSGMOG00000004819	-	85	65.714	ENSHCOG00000015620	-	96	65.385	Hippocampus_comes
ENSGMOG00000004819	-	94	50.213	ENSLBEG00000021906	-	100	50.213	Labrus_bergylta
ENSGMOG00000004819	-	90	53.394	ENSLBEG00000004625	-	74	53.846	Labrus_bergylta
ENSGMOG00000004819	-	86	67.773	ENSMAMG00000004136	-	99	67.299	Mastacembelus_armatus
ENSGMOG00000004819	-	90	57.658	ENSMAMG00000009045	-	93	57.658	Mastacembelus_armatus
ENSGMOG00000004819	-	86	60.190	ENSMZEG00005007792	-	94	59.242	Maylandia_zebra
ENSGMOG00000004819	-	88	63.426	ENSMMOG00000012378	-	87	62.037	Mola_mola
ENSGMOG00000004819	-	89	58.182	ENSMMOG00000003895	-	85	57.727	Mola_mola
ENSGMOG00000004819	-	88	65.741	ENSMALG00000018253	-	82	64.651	Monopterus_albus
ENSGMOG00000004819	-	92	61.333	ENSONIG00000015704	-	91	60.444	Oreochromis_niloticus
ENSGMOG00000004819	-	86	64.929	ENSORLG00015021920	-	96	63.507	Oryzias_latipes_hsok
ENSGMOG00000004819	-	84	66.184	ENSOMEG00000020721	-	79	64.734	Oryzias_melastigma
ENSGMOG00000004819	-	92	58.515	ENSPMGG00000002101	-	92	58.515	Periophthalmus_magnuspinnatus
ENSGMOG00000004819	-	95	57.265	ENSPMAG00000009464	-	94	56.410	Petromyzon_marinus
ENSGMOG00000004819	-	99	60.000	ENSPFOG00000022154	-	60	58.403	Poecilia_formosa
ENSGMOG00000004819	-	95	57.143	ENSPNYG00000014384	-	93	56.897	Pundamilia_nyererei
ENSGMOG00000004819	-	86	60.190	ENSPNYG00000018879	-	94	59.242	Pundamilia_nyererei
ENSGMOG00000004819	-	89	68.203	ENSSMAG00000008324	-	90	66.820	Scophthalmus_maximus
ENSGMOG00000004819	-	86	68.868	ENSSDUG00000015232	-	99	66.981	Seriola_dumerili
ENSGMOG00000004819	-	90	58.636	ENSSLDG00000023195	-	88	58.559	Seriola_lalandi_dorsalis
ENSGMOG00000004819	-	86	69.524	ENSSLDG00000016974	-	99	67.619	Seriola_lalandi_dorsalis
ENSGMOG00000004819	-	84	63.768	ENSTRUG00000010008	-	83	61.836	Takifugu_rubripes
ENSGMOG00000004819	-	85	65.550	ENSTNIG00000011614	-	93	63.636	Tetraodon_nigroviridis
ENSGMOG00000004819	-	92	58.222	ENSTNIG00000005451	-	91	58.222	Tetraodon_nigroviridis