EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000004916 (Gene tree)
Gene ID: -
Gene Symbol: smg7
Alias: fa99h10|wu:fa99h10
Full Name: SMG7 nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 19023 bases
Position: chrGeneScaffold_375:54589-73611
Accession: ZDB-GENE-030131-9122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000005236	EST1	PF10374.9	3.4e-25	1	1
ENSGMOP00000005236	EST1_DNA_bind	PF10373.9	6.5e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000005394	-	3222	-	ENSGMOP00000005236	1074 (aa)	-	UPI00023F07D7

Gene Model

Click here to download ENSGMOG00000004916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000004916's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000004916	smg7	92	67.883	ENSG00000116698	SMG7	88	90.683	Homo_sapiens
ENSGMOG00000004916	smg7	85	83.333	ENSAPOG00000009611	smg7	83	83.333	Acanthochromis_polyacanthus
ENSGMOG00000004916	smg7	85	74.338	ENSAMEG00000002357	SMG7	89	74.338	Ailuropoda_melanoleuca
ENSGMOG00000004916	smg7	83	78.916	ENSACIG00000015152	smg7	87	78.916	Amphilophus_citrinellus
ENSGMOG00000004916	smg7	91	81.015	ENSAOCG00000013538	smg7	89	81.015	Amphiprion_ocellaris
ENSGMOG00000004916	smg7	91	80.827	ENSAPEG00000007851	smg7	89	80.827	Amphiprion_percula
ENSGMOG00000004916	smg7	91	81.391	ENSATEG00000006931	smg7	85	79.623	Anabas_testudineus
ENSGMOG00000004916	smg7	74	73.764	ENSAPLG00000015811	SMG7	74	73.764	Anas_platyrhynchos
ENSGMOG00000004916	smg7	86	73.585	ENSACAG00000014989	SMG7	89	73.585	Anolis_carolinensis
ENSGMOG00000004916	smg7	89	73.823	ENSANAG00000028114	SMG7	85	90.446	Aotus_nancymaae
ENSGMOG00000004916	smg7	91	81.391	ENSACLG00000022079	smg7	89	81.391	Astatotilapia_calliptera
ENSGMOG00000004916	smg7	91	79.473	ENSAMXG00000020809	smg7	89	79.473	Astyanax_mexicanus
ENSGMOG00000004916	smg7	92	67.006	ENSBTAG00000008003	SMG7	87	67.006	Bos_taurus
ENSGMOG00000004916	smg7	88	74.102	ENSCJAG00000005135	SMG7	86	90.446	Callithrix_jacchus
ENSGMOG00000004916	smg7	92	67.297	ENSCAFG00000013276	SMG7	94	56.826	Canis_familiaris
ENSGMOG00000004916	smg7	89	74.109	ENSCAFG00020015475	SMG7	89	87.805	Canis_lupus_dingo
ENSGMOG00000004916	smg7	92	66.909	ENSCHIG00000018192	SMG7	89	66.909	Capra_hircus
ENSGMOG00000004916	smg7	92	66.715	ENSTSYG00000002667	SMG7	80	91.613	Carlito_syrichta
ENSGMOG00000004916	smg7	92	67.151	ENSCPOG00000008906	SMG7	89	66.276	Cavia_porcellus
ENSGMOG00000004916	smg7	85	73.727	ENSCCAG00000028596	SMG7	85	90.446	Cebus_capucinus
ENSGMOG00000004916	smg7	92	66.860	ENSCATG00000011063	SMG7	85	90.446	Cercocebus_atys
ENSGMOG00000004916	smg7	92	67.883	ENSCLAG00000010751	SMG7	89	67.883	Chinchilla_lanigera
ENSGMOG00000004916	smg7	92	66.860	ENSCSAG00000012654	SMG7	87	66.860	Chlorocebus_sabaeus
ENSGMOG00000004916	smg7	75	63.233	ENSCHOG00000010522	SMG7	72	63.233	Choloepus_hoffmanni
ENSGMOG00000004916	smg7	88	75.094	ENSCPBG00000015724	SMG7	82	75.094	Chrysemys_picta_bellii
ENSGMOG00000004916	smg7	85	73.469	ENSCANG00000015680	SMG7	85	90.446	Colobus_angolensis_palliatus
ENSGMOG00000004916	smg7	92	67.007	ENSCGRG00001013705	Smg7	89	67.007	Cricetulus_griseus_chok1gshd
ENSGMOG00000004916	smg7	92	66.279	ENSCGRG00000018401	Smg7	88	66.279	Cricetulus_griseus_crigri
ENSGMOG00000004916	smg7	90	79.231	ENSCVAG00000011842	smg7	84	79.423	Cyprinodon_variegatus
ENSGMOG00000004916	smg7	91	80.226	ENSDARG00000060767	smg7	89	80.226	Danio_rerio
ENSGMOG00000004916	smg7	90	67.445	ENSDORG00000007331	Smg7	85	67.445	Dipodomys_ordii
ENSGMOG00000004916	smg7	92	67.883	ENSETEG00000002654	SMG7	91	67.883	Echinops_telfairi
ENSGMOG00000004916	smg7	92	68.321	ENSEASG00005006524	SMG7	96	56.750	Equus_asinus_asinus
ENSGMOG00000004916	smg7	85	86.269	ENSECAG00000004313	SMG7	94	86.053	Equus_caballus
ENSGMOG00000004916	smg7	92	66.861	ENSEEUG00000002024	SMG7	86	66.861	Erinaceus_europaeus
ENSGMOG00000004916	smg7	92	79.661	ENSELUG00000010293	smg7	87	79.661	Esox_lucius
ENSGMOG00000004916	smg7	93	68.175	ENSFCAG00000010900	SMG7	96	61.538	Felis_catus
ENSGMOG00000004916	smg7	85	73.786	ENSFALG00000003047	SMG7	83	73.786	Ficedula_albicollis
ENSGMOG00000004916	smg7	92	67.742	ENSFDAG00000012121	SMG7	88	67.362	Fukomys_damarensis
ENSGMOG00000004916	smg7	91	79.775	ENSFHEG00000011073	smg7	82	79.775	Fundulus_heteroclitus
ENSGMOG00000004916	smg7	74	74.340	ENSGALG00000004667	SMG7	72	74.340	Gallus_gallus
ENSGMOG00000004916	smg7	91	79.550	ENSGAFG00000019000	smg7	88	79.550	Gambusia_affinis
ENSGMOG00000004916	smg7	91	80.075	ENSGACG00000001634	smg7	90	80.075	Gasterosteus_aculeatus
ENSGMOG00000004916	smg7	92	66.860	ENSGGOG00000002342	SMG7	82	89.375	Gorilla_gorilla
ENSGMOG00000004916	smg7	91	81.391	ENSHBUG00000003726	smg7	91	81.391	Haplochromis_burtoni
ENSGMOG00000004916	smg7	91	67.064	ENSHGLG00000009353	SMG7	89	67.064	Heterocephalus_glaber_female
ENSGMOG00000004916	smg7	91	64.382	ENSHGLG00100009637	-	89	64.382	Heterocephalus_glaber_male
ENSGMOG00000004916	smg7	92	62.592	ENSHGLG00100004878	-	88	62.500	Heterocephalus_glaber_male
ENSGMOG00000004916	smg7	91	80.639	ENSIPUG00000016997	smg7	83	80.639	Ictalurus_punctatus
ENSGMOG00000004916	smg7	92	67.591	ENSSTOG00000000401	SMG7	89	67.591	Ictidomys_tridecemlineatus
ENSGMOG00000004916	smg7	92	67.690	ENSJJAG00000012351	Smg7	96	56.533	Jaculus_jaculus
ENSGMOG00000004916	smg7	87	73.663	ENSKMAG00000004900	smg7	88	73.861	Kryptolebias_marmoratus
ENSGMOG00000004916	smg7	50	62.657	ENSLBEG00000005220	-	76	62.545	Labrus_bergylta
ENSGMOG00000004916	smg7	91	79.473	ENSLBEG00000002983	smg7	89	79.473	Labrus_bergylta
ENSGMOG00000004916	smg7	91	76.792	ENSLACG00000000972	SMG7	90	76.792	Latimeria_chalumnae
ENSGMOG00000004916	smg7	91	71.078	ENSLOCG00000002010	smg7	89	71.078	Lepisosteus_oculatus
ENSGMOG00000004916	smg7	92	67.006	ENSLAFG00000008186	SMG7	88	67.548	Loxodonta_africana
ENSGMOG00000004916	smg7	92	67.591	ENSMFAG00000031653	SMG7	85	90.446	Macaca_fascicularis
ENSGMOG00000004916	smg7	88	72.710	ENSMMUG00000018458	SMG7	82	72.571	Macaca_mulatta
ENSGMOG00000004916	smg7	85	73.469	ENSMNEG00000034798	SMG7	85	90.446	Macaca_nemestrina
ENSGMOG00000004916	smg7	92	66.860	ENSMLEG00000037170	SMG7	82	73.320	Mandrillus_leucophaeus
ENSGMOG00000004916	smg7	82	80.263	ENSMAMG00000018733	smg7	78	80.263	Mastacembelus_armatus
ENSGMOG00000004916	smg7	96	81.391	ENSMZEG00005015247	smg7	89	81.391	Maylandia_zebra
ENSGMOG00000004916	smg7	74	74.046	ENSMGAG00000001561	SMG7	72	74.046	Meleagris_gallopavo
ENSGMOG00000004916	smg7	92	67.153	ENSMAUG00000019484	Smg7	89	67.153	Mesocricetus_auratus
ENSGMOG00000004916	smg7	88	74.809	ENSMICG00000007145	SMG7	82	90.446	Microcebus_murinus
ENSGMOG00000004916	smg7	92	66.861	ENSMOCG00000020748	Smg7	78	73.864	Microtus_ochrogaster
ENSGMOG00000004916	smg7	83	78.868	ENSMMOG00000001524	smg7	87	78.868	Mola_mola
ENSGMOG00000004916	smg7	71	74.857	ENSMODG00000007139	SMG7	73	74.857	Monodelphis_domestica
ENSGMOG00000004916	smg7	91	81.015	ENSMALG00000000061	smg7	83	81.015	Monopterus_albus
ENSGMOG00000004916	smg7	99	56.100	MGP_CAROLIEiJ_G0014704	Smg7	89	74.242	Mus_caroli
ENSGMOG00000004916	smg7	94	67.299	ENSMUSG00000042772	Smg7	96	56.178	Mus_musculus
ENSGMOG00000004916	smg7	92	67.299	MGP_PahariEiJ_G0027940	Smg7	96	56.178	Mus_pahari
ENSGMOG00000004916	smg7	94	67.299	MGP_SPRETEiJ_G0015511	Smg7	78	74.242	Mus_spretus
ENSGMOG00000004916	smg7	92	67.511	ENSMPUG00000011732	SMG7	94	56.796	Mustela_putorius_furo
ENSGMOG00000004916	smg7	92	67.449	ENSMLUG00000015417	SMG7	88	67.449	Myotis_lucifugus
ENSGMOG00000004916	smg7	92	67.006	ENSNGAG00000009836	Smg7	88	67.006	Nannospalax_galili
ENSGMOG00000004916	smg7	81	73.000	ENSNBRG00000024343	smg7	87	72.656	Neolamprologus_brichardi
ENSGMOG00000004916	smg7	87	72.710	ENSNLEG00000018018	SMG7	82	73.523	Nomascus_leucogenys
ENSGMOG00000004916	smg7	72	64.205	ENSMEUG00000004681	SMG7	69	64.205	Notamacropus_eugenii
ENSGMOG00000004916	smg7	91	66.421	ENSOPRG00000013942	SMG7	96	54.995	Ochotona_princeps
ENSGMOG00000004916	smg7	92	67.883	ENSODEG00000010390	SMG7	89	67.883	Octodon_degus
ENSGMOG00000004916	smg7	91	81.015	ENSONIG00000000277	smg7	88	81.015	Oreochromis_niloticus
ENSGMOG00000004916	smg7	91	67.359	ENSOANG00000000994	SMG7	90	67.359	Ornithorhynchus_anatinus
ENSGMOG00000004916	smg7	92	66.860	ENSOCUG00000005887	SMG7	82	66.860	Oryctolagus_cuniculus
ENSGMOG00000004916	smg7	91	80.603	ENSORLG00000007314	smg7	86	80.603	Oryzias_latipes
ENSGMOG00000004916	smg7	91	80.414	ENSORLG00020015779	smg7	86	80.414	Oryzias_latipes_hni
ENSGMOG00000004916	smg7	91	80.226	ENSORLG00015012289	smg7	86	80.226	Oryzias_latipes_hsok
ENSGMOG00000004916	smg7	91	79.661	ENSOMEG00000002328	smg7	85	79.661	Oryzias_melastigma
ENSGMOG00000004916	smg7	92	67.789	ENSOGAG00000003107	SMG7	86	67.789	Otolemur_garnettii
ENSGMOG00000004916	smg7	92	67.151	ENSOARG00000001352	SMG7	87	67.151	Ovis_aries
ENSGMOG00000004916	smg7	85	73.673	ENSPPAG00000031619	SMG7	90	87.273	Pan_paniscus
ENSGMOG00000004916	smg7	88	75.379	ENSPPRG00000011222	SMG7	89	75.379	Panthera_pardus
ENSGMOG00000004916	smg7	92	67.540	ENSPTIG00000007242	SMG7	89	74.134	Panthera_tigris_altaica
ENSGMOG00000004916	smg7	92	67.737	ENSPTRG00000001764	SMG7	85	90.446	Pan_troglodytes
ENSGMOG00000004916	smg7	92	67.591	ENSPANG00000004520	SMG7	87	66.860	Papio_anubis
ENSGMOG00000004916	smg7	96	76.460	ENSPKIG00000007242	smg7	89	76.460	Paramormyrops_kingsleyae
ENSGMOG00000004916	smg7	92	67.695	ENSPSIG00000012201	SMG7	96	57.194	Pelodiscus_sinensis
ENSGMOG00000004916	smg7	92	66.715	ENSPEMG00000011315	Smg7	89	66.715	Peromyscus_maniculatus_bairdii
ENSGMOG00000004916	smg7	88	75.000	ENSPCIG00000003786	SMG7	89	91.250	Phascolarctos_cinereus
ENSGMOG00000004916	smg7	91	79.323	ENSPFOG00000019219	smg7	84	79.323	Poecilia_formosa
ENSGMOG00000004916	smg7	91	79.323	ENSPLAG00000001446	smg7	83	79.323	Poecilia_latipinna
ENSGMOG00000004916	smg7	91	79.323	ENSPMEG00000005218	smg7	85	79.323	Poecilia_mexicana
ENSGMOG00000004916	smg7	81	79.323	ENSPREG00000019039	smg7	78	79.323	Poecilia_reticulata
ENSGMOG00000004916	smg7	76	74.953	ENSPPYG00000000427	SMG7	72	74.811	Pongo_abelii
ENSGMOG00000004916	smg7	84	68.737	ENSPCAG00000008360	SMG7	79	68.737	Procavia_capensis
ENSGMOG00000004916	smg7	92	67.883	ENSPCOG00000011996	SMG7	77	90.446	Propithecus_coquereli
ENSGMOG00000004916	smg7	86	61.877	ENSPVAG00000000851	SMG7	81	61.877	Pteropus_vampyrus
ENSGMOG00000004916	smg7	91	81.391	ENSPNYG00000007643	smg7	89	81.391	Pundamilia_nyererei
ENSGMOG00000004916	smg7	91	79.661	ENSPNAG00000011374	smg7	89	79.661	Pygocentrus_nattereri
ENSGMOG00000004916	smg7	92	67.591	ENSRNOG00000027962	Smg7	89	73.320	Rattus_norvegicus
ENSGMOG00000004916	smg7	92	66.860	ENSRBIG00000036316	SMG7	82	73.320	Rhinopithecus_bieti
ENSGMOG00000004916	smg7	92	67.591	ENSRROG00000035719	SMG7	82	73.320	Rhinopithecus_roxellana
ENSGMOG00000004916	smg7	92	67.737	ENSSBOG00000023454	SMG7	88	90.683	Saimiri_boliviensis_boliviensis
ENSGMOG00000004916	smg7	76	74.525	ENSSHAG00000013147	SMG7	72	74.525	Sarcophilus_harrisii
ENSGMOG00000004916	smg7	91	77.589	ENSSFOG00015017252	smg7	87	76.893	Scleropages_formosus
ENSGMOG00000004916	smg7	90	80.899	ENSSMAG00000006067	smg7	89	80.899	Scophthalmus_maximus
ENSGMOG00000004916	smg7	91	81.391	ENSSDUG00000017543	smg7	88	81.391	Seriola_dumerili
ENSGMOG00000004916	smg7	76	74.237	ENSSPUG00000002064	SMG7	72	73.585	Sphenodon_punctatus
ENSGMOG00000004916	smg7	91	78.558	ENSSPAG00000008733	smg7	87	78.558	Stegastes_partitus
ENSGMOG00000004916	smg7	92	68.175	ENSSSCG00000015558	SMG7	89	68.175	Sus_scrofa
ENSGMOG00000004916	smg7	74	74.237	ENSTGUG00000003928	SMG7	72	74.237	Taeniopygia_guttata
ENSGMOG00000004916	smg7	100	60.192	ENSTNIG00000002802	smg7	97	60.192	Tetraodon_nigroviridis
ENSGMOG00000004916	smg7	75	66.286	ENSTBEG00000003220	SMG7	69	66.286	Tupaia_belangeri
ENSGMOG00000004916	smg7	91	67.695	ENSTTRG00000014778	SMG7	86	67.695	Tursiops_truncatus
ENSGMOG00000004916	smg7	76	66.821	ENSUAMG00000017473	SMG7	84	66.821	Ursus_americanus
ENSGMOG00000004916	smg7	88	66.821	ENSUMAG00000016389	SMG7	97	55.974	Ursus_maritimus
ENSGMOG00000004916	smg7	92	68.029	ENSVVUG00000008976	SMG7	96	57.244	Vulpes_vulpes
ENSGMOG00000004916	smg7	77	70.489	ENSXETG00000012528	smg7	73	70.489	Xenopus_tropicalis
ENSGMOG00000004916	smg7	91	79.699	ENSXMAG00000007123	smg7	88	79.699	Xiphophorus_maculatus