EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000004979 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 2215 bases
Position: chrGeneScaffold_2700:3587-5801
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000005261	MMR_HSR1	PF01926.23	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000005419	-	648	-	ENSGMOP00000005261	215 (aa)	-	UPI00023F08C2

Gene Model

Click here to download ENSGMOG00000004979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000004979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000004979	-	90	41.753	ENSGMOG00000002868	rab5aa	88	41.753
ENSGMOG00000004979	-	75	32.298	ENSGMOG00000018928	rabl2	80	32.298
ENSGMOG00000004979	-	75	42.515	ENSGMOG00000006175	rab33a	71	42.515
ENSGMOG00000004979	-	92	43.655	ENSGMOG00000001834	rab4b	94	43.655
ENSGMOG00000004979	-	73	40.741	ENSGMOG00000014481	rab36	85	40.741
ENSGMOG00000004979	-	63	32.414	ENSGMOG00000002137	ARL4D	71	32.414
ENSGMOG00000004979	-	76	47.853	ENSGMOG00000006450	rab11al	81	47.853
ENSGMOG00000004979	-	76	42.331	ENSGMOG00000015096	rab5c	81	40.884
ENSGMOG00000004979	-	74	41.509	ENSGMOG00000001876	-	92	41.509
ENSGMOG00000004979	-	54	32.203	ENSGMOG00000013490	arl8a	62	32.203
ENSGMOG00000004979	-	91	42.132	ENSGMOG00000003577	-	96	42.132
ENSGMOG00000004979	-	74	45.122	ENSGMOG00000011665	zgc:101559	78	45.122
ENSGMOG00000004979	-	77	50.000	ENSGMOG00000007390	rab11ba	76	50.000
ENSGMOG00000004979	-	66	37.589	ENSGMOG00000019073	-	68	37.589
ENSGMOG00000004979	-	77	51.205	ENSGMOG00000009211	rab11bb	76	51.205
ENSGMOG00000004979	-	77	52.121	ENSGMOG00000008355	rab11a	76	52.121
ENSGMOG00000004979	-	75	39.130	ENSGMOG00000006968	-	80	39.130
ENSGMOG00000004979	-	54	31.356	ENSGMOG00000002416	arl8bb	61	31.356
ENSGMOG00000004979	-	100	65.909	ENSGMOG00000010022	-	99	65.909
ENSGMOG00000004979	-	80	33.918	ENSGMOG00000005102	rab23	77	33.880
ENSGMOG00000004979	-	72	38.365	ENSGMOG00000020144	rab9a	78	38.365
ENSGMOG00000004979	-	97	67.773	ENSGMOG00000007293	rab1ba	97	67.773
ENSGMOG00000004979	-	89	47.120	ENSGMOG00000002552	rab30	94	47.120
ENSGMOG00000004979	-	74	38.037	ENSGMOG00000007712	RAB7A	78	38.037
ENSGMOG00000004979	-	73	63.057	ENSGMOG00000017688	rab35b	78	63.057
ENSGMOG00000004979	-	75	37.267	ENSGMOG00000004095	rab41	76	37.267
ENSGMOG00000004979	-	77	52.326	ENSGMOG00000004096	-	78	52.326
ENSGMOG00000004979	-	92	40.909	ENSGMOG00000016608	rab18b	90	40.909
ENSGMOG00000004979	-	72	57.419	ENSGMOG00000015174	si:dkey-16l2.16	94	57.419
ENSGMOG00000004979	-	73	33.951	ENSGMOG00000018475	RAB29	98	33.951
ENSGMOG00000004979	-	72	35.256	ENSGMOG00000012623	si:ch73-116o1.2	89	35.256
ENSGMOG00000004979	-	75	36.527	ENSGMOG00000020194	rab9b	82	36.527
ENSGMOG00000004979	-	75	45.062	ENSGMOG00000006444	rab25b	96	45.062
ENSGMOG00000004979	-	76	44.578	ENSGMOG00000008450	-	77	44.578
ENSGMOG00000004979	-	80	30.636	ENSGMOG00000012401	rheb	91	30.636
ENSGMOG00000004979	-	82	44.382	ENSGMOG00000010808	RAB39B	83	44.382
ENSGMOG00000004979	-	75	36.646	ENSGMOG00000018741	-	76	36.646
ENSGMOG00000004979	-	77	50.000	ENSGMOG00000009668	-	76	50.000
ENSGMOG00000004979	-	74	37.267	ENSGMOG00000017644	si:ch211-247i17.1	92	37.267
ENSGMOG00000004979	-	68	46.259	ENSGMOG00000011766	-	94	46.259
ENSGMOG00000004979	-	85	34.595	ENSGMOG00000016238	rab34a	77	33.488
ENSGMOG00000004979	-	87	43.850	ENSGMOG00000012335	rab12	78	43.850
ENSGMOG00000004979	-	74	45.000	ENSGMOG00000007127	RAB5A	87	45.000
ENSGMOG00000004979	-	73	48.408	ENSGMOG00000016277	RAB15	74	48.408
ENSGMOG00000004979	-	76	37.805	ENSGMOG00000010196	hrasb	87	37.805
ENSGMOG00000004979	-	73	38.509	ENSGMOG00000007140	rab34b	78	38.509
ENSGMOG00000004979	-	75	38.509	ENSGMOG00000013070	rab22a	83	38.509
ENSGMOG00000004979	-	72	36.478	ENSGMOG00000020148	-	83	36.478
ENSGMOG00000004979	-	88	34.211	ENSGMOG00000010581	kras	97	34.211
ENSGMOG00000004979	-	87	42.564	ENSGMOG00000000532	-	91	42.564
ENSGMOG00000004979	-	76	50.000	ENSGMOG00000003610	rab15	77	50.000
ENSGMOG00000004979	-	74	38.037	ENSGMOG00000011308	-	79	38.037
ENSGMOG00000004979	-	75	46.707	ENSGMOG00000000885	rab33ba	79	46.707
ENSGMOG00000004979	-	97	68.269	ENSGMOG00000004888	rab1ab	100	68.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000004979	-	97	80.569	ENSAPOG00000004980	-	98	80.569	Acanthochromis_polyacanthus
ENSGMOG00000004979	-	97	81.517	ENSACIG00000009006	zgc:171927	98	81.517	Amphilophus_citrinellus
ENSGMOG00000004979	-	97	78.673	ENSAOCG00000024149	-	98	78.673	Amphiprion_ocellaris
ENSGMOG00000004979	-	66	82.979	ENSAOCG00000013808	-	98	88.976	Amphiprion_ocellaris
ENSGMOG00000004979	-	97	79.147	ENSAPEG00000022171	zgc:171927	94	82.051	Amphiprion_percula
ENSGMOG00000004979	-	97	81.517	ENSATEG00000003430	zgc:171927	98	81.517	Anabas_testudineus
ENSGMOG00000004979	-	97	81.818	ENSACLG00000013734	-	98	81.818	Astatotilapia_calliptera
ENSGMOG00000004979	-	97	73.077	ENSAMXG00000039486	zgc:171927	98	73.077	Astyanax_mexicanus
ENSGMOG00000004979	-	97	76.303	ENSCSEG00000014416	zgc:171927	98	76.303	Cynoglossus_semilaevis
ENSGMOG00000004979	-	97	80.569	ENSCVAG00000009222	zgc:171927	98	80.569	Cyprinodon_variegatus
ENSGMOG00000004979	-	97	72.596	ENSDARG00000033056	zgc:171927	98	72.596	Danio_rerio
ENSGMOG00000004979	-	97	74.519	ENSELUG00000011680	zgc:171927	98	74.519	Esox_lucius
ENSGMOG00000004979	-	97	81.991	ENSFHEG00000022176	zgc:171927	98	81.991	Fundulus_heteroclitus
ENSGMOG00000004979	-	99	77.778	ENSGAFG00000015702	zgc:171927	86	77.778	Gambusia_affinis
ENSGMOG00000004979	-	100	79.091	ENSGACG00000013401	zgc:171927	99	79.091	Gasterosteus_aculeatus
ENSGMOG00000004979	-	97	81.818	ENSHBUG00000002397	-	98	81.818	Haplochromis_burtoni
ENSGMOG00000004979	-	97	81.991	ENSKMAG00000009856	zgc:171927	98	81.991	Kryptolebias_marmoratus
ENSGMOG00000004979	-	97	78.199	ENSLBEG00000005791	-	98	78.199	Labrus_bergylta
ENSGMOG00000004979	-	97	77.830	ENSLBEG00000027226	-	92	77.064	Labrus_bergylta
ENSGMOG00000004979	-	97	70.335	ENSLOCG00000014692	zgc:171927	97	70.335	Lepisosteus_oculatus
ENSGMOG00000004979	-	97	80.095	ENSMAMG00000020135	zgc:171927	98	80.095	Mastacembelus_armatus
ENSGMOG00000004979	-	97	81.818	ENSMZEG00005024685	-	98	81.818	Maylandia_zebra
ENSGMOG00000004979	-	97	77.725	ENSMMOG00000009833	-	98	77.725	Mola_mola
ENSGMOG00000004979	-	97	79.327	ENSMALG00000021129	zgc:171927	98	79.327	Monopterus_albus
ENSGMOG00000004979	-	97	82.297	ENSNBRG00000006202	zgc:171927	98	82.297	Neolamprologus_brichardi
ENSGMOG00000004979	-	97	80.476	ENSORLG00000000602	zgc:171927	98	80.476	Oryzias_latipes
ENSGMOG00000004979	-	97	80.476	ENSORLG00020021071	zgc:171927	98	80.476	Oryzias_latipes_hni
ENSGMOG00000004979	-	97	80.000	ENSORLG00015010098	zgc:171927	98	80.000	Oryzias_latipes_hsok
ENSGMOG00000004979	-	97	80.569	ENSOMEG00000020594	zgc:171927	98	80.569	Oryzias_melastigma
ENSGMOG00000004979	-	97	77.251	ENSPFOG00000013810	zgc:171927	96	77.251	Poecilia_formosa
ENSGMOG00000004979	-	97	76.303	ENSPLAG00000005869	zgc:171927	98	76.303	Poecilia_latipinna
ENSGMOG00000004979	-	98	76.995	ENSPMEG00000022350	zgc:171927	98	77.251	Poecilia_mexicana
ENSGMOG00000004979	-	97	78.199	ENSPREG00000017517	zgc:171927	98	78.199	Poecilia_reticulata
ENSGMOG00000004979	-	97	81.818	ENSPNYG00000007520	-	98	81.818	Pundamilia_nyererei
ENSGMOG00000004979	-	97	73.558	ENSPNAG00000029574	zgc:171927	98	73.558	Pygocentrus_nattereri
ENSGMOG00000004979	-	97	75.481	ENSSFOG00015005464	zgc:171927	96	75.481	Scleropages_formosus
ENSGMOG00000004979	-	97	78.673	ENSSMAG00000004416	-	98	78.673	Scophthalmus_maximus
ENSGMOG00000004979	-	97	80.569	ENSSDUG00000004445	zgc:171927	98	80.569	Seriola_dumerili
ENSGMOG00000004979	-	97	80.569	ENSSLDG00000018024	zgc:171927	98	80.569	Seriola_lalandi_dorsalis
ENSGMOG00000004979	-	97	80.569	ENSSPAG00000013533	zgc:171927	98	80.569	Stegastes_partitus
ENSGMOG00000004979	-	97	78.673	ENSXCOG00000010695	zgc:171927	98	78.673	Xiphophorus_couchianus
ENSGMOG00000004979	-	97	78.673	ENSXMAG00000004683	zgc:171927	98	78.673	Xiphophorus_maculatus