EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000005040 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding fox-1 homolog 1%2C like
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 9147 bases
Position: chrGeneScaffold_1960:712215-721361
Accession: ZDB-GENE-040923-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000005350	Fox-1_C	PF12414.8	5.1e-33	1	1
ENSGMOP00000005350	RRM_1	PF00076.22	8.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000005510	-	1146	-	ENSGMOP00000005350	381 (aa)	-	UPI00023F09E0

Gene Model

Click here to download ENSGMOG00000005040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000005040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000005040	rbfox1l	65	54.704	ENSGMOG00000005278	rbfox2	85	52.266
ENSGMOG00000005040	rbfox1l	61	74.026	ENSGMOG00000019304	-	86	59.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000005040	rbfox1l	97	82.480	ENSAPOG00000016304	rbfox1l	98	83.288	Acanthochromis_polyacanthus
ENSGMOG00000005040	rbfox1l	100	76.501	ENSACIG00000006441	rbfox1l	100	76.501	Amphilophus_citrinellus
ENSGMOG00000005040	rbfox1l	88	81.361	ENSAOCG00000020938	rbfox1l	100	82.249	Amphiprion_ocellaris
ENSGMOG00000005040	rbfox1l	100	83.551	ENSAPEG00000008232	rbfox1l	100	84.334	Amphiprion_percula
ENSGMOG00000005040	rbfox1l	100	80.679	ENSATEG00000022649	rbfox1l	100	80.679	Anabas_testudineus
ENSGMOG00000005040	rbfox1l	65	73.123	ENSACAG00000011931	-	91	73.518	Anolis_carolinensis
ENSGMOG00000005040	rbfox1l	100	82.507	ENSACLG00000021394	rbfox1l	100	82.507	Astatotilapia_calliptera
ENSGMOG00000005040	rbfox1l	100	83.161	ENSAMXG00000010470	rbfox1l	100	83.420	Astyanax_mexicanus
ENSGMOG00000005040	rbfox1l	100	57.474	ENSCPBG00000010944	-	100	59.231	Chrysemys_picta_bellii
ENSGMOG00000005040	rbfox1l	100	82.031	ENSCSEG00000018898	rbfox1l	100	82.812	Cynoglossus_semilaevis
ENSGMOG00000005040	rbfox1l	100	81.462	ENSCVAG00000007986	rbfox1l	100	81.201	Cyprinodon_variegatus
ENSGMOG00000005040	rbfox1l	100	82.124	ENSDARG00000021184	rbfox1l	100	82.902	Danio_rerio
ENSGMOG00000005040	rbfox1l	100	78.626	ENSELUG00000015077	rbfox1l	100	80.407	Esox_lucius
ENSGMOG00000005040	rbfox1l	79	92.683	ENSFHEG00000016557	rbfox1l	95	92.683	Fundulus_heteroclitus
ENSGMOG00000005040	rbfox1l	92	82.153	ENSGAFG00000013211	rbfox1l	97	82.153	Gambusia_affinis
ENSGMOG00000005040	rbfox1l	100	84.595	ENSGACG00000010757	rbfox1l	100	84.595	Gasterosteus_aculeatus
ENSGMOG00000005040	rbfox1l	68	69.582	ENSGAGG00000012440	-	84	74.390	Gopherus_agassizii
ENSGMOG00000005040	rbfox1l	100	82.507	ENSHBUG00000013406	rbfox1l	100	82.507	Haplochromis_burtoni
ENSGMOG00000005040	rbfox1l	100	81.771	ENSHCOG00000020771	rbfox1l	100	82.292	Hippocampus_comes
ENSGMOG00000005040	rbfox1l	99	76.178	ENSIPUG00000000065	rbfox1l	99	79.096	Ictalurus_punctatus
ENSGMOG00000005040	rbfox1l	100	81.299	ENSKMAG00000005146	rbfox1l	100	81.299	Kryptolebias_marmoratus
ENSGMOG00000005040	rbfox1l	100	84.856	ENSLBEG00000017089	rbfox1l	100	84.856	Labrus_bergylta
ENSGMOG00000005040	rbfox1l	100	82.768	ENSMAMG00000019480	rbfox1l	100	82.768	Mastacembelus_armatus
ENSGMOG00000005040	rbfox1l	100	82.507	ENSMZEG00005016374	rbfox1l	100	82.507	Maylandia_zebra
ENSGMOG00000005040	rbfox1l	100	83.029	ENSMMOG00000016530	rbfox1l	100	83.029	Mola_mola
ENSGMOG00000005040	rbfox1l	100	79.896	ENSMALG00000009384	rbfox1l	100	79.634	Monopterus_albus
ENSGMOG00000005040	rbfox1l	100	82.507	ENSNBRG00000003346	rbfox1l	100	82.507	Neolamprologus_brichardi
ENSGMOG00000005040	rbfox1l	100	83.290	ENSONIG00000012754	rbfox1l	100	83.290	Oreochromis_niloticus
ENSGMOG00000005040	rbfox1l	100	81.723	ENSORLG00000011269	rbfox1l	100	82.507	Oryzias_latipes
ENSGMOG00000005040	rbfox1l	100	81.984	ENSORLG00020000162	rbfox1l	100	82.768	Oryzias_latipes_hni
ENSGMOG00000005040	rbfox1l	100	82.507	ENSORLG00015013464	rbfox1l	100	83.290	Oryzias_latipes_hsok
ENSGMOG00000005040	rbfox1l	100	82.245	ENSOMEG00000010584	rbfox1l	100	83.029	Oryzias_melastigma
ENSGMOG00000005040	rbfox1l	100	85.156	ENSPKIG00000012029	rbfox1l	100	85.156	Paramormyrops_kingsleyae
ENSGMOG00000005040	rbfox1l	100	75.196	ENSPMGG00000012082	rbfox1l	100	77.023	Periophthalmus_magnuspinnatus
ENSGMOG00000005040	rbfox1l	100	81.201	ENSPFOG00000009338	rbfox1l	100	81.201	Poecilia_formosa
ENSGMOG00000005040	rbfox1l	86	74.540	ENSPLAG00000012816	rbfox1l	99	74.540	Poecilia_latipinna
ENSGMOG00000005040	rbfox1l	100	78.068	ENSPMEG00000017597	rbfox1l	100	78.068	Poecilia_mexicana
ENSGMOG00000005040	rbfox1l	100	78.329	ENSPREG00000007940	rbfox1l	100	78.329	Poecilia_reticulata
ENSGMOG00000005040	rbfox1l	100	82.245	ENSPNYG00000002098	rbfox1l	100	82.245	Pundamilia_nyererei
ENSGMOG00000005040	rbfox1l	100	79.587	ENSPNAG00000001620	rbfox1l	100	80.620	Pygocentrus_nattereri
ENSGMOG00000005040	rbfox1l	100	80.000	ENSSFOG00015000675	rbfox1l	100	80.779	Scleropages_formosus
ENSGMOG00000005040	rbfox1l	100	85.117	ENSSMAG00000013090	rbfox1l	100	85.117	Scophthalmus_maximus
ENSGMOG00000005040	rbfox1l	100	81.234	ENSSDUG00000008705	rbfox1l	100	80.977	Seriola_dumerili
ENSGMOG00000005040	rbfox1l	100	81.959	ENSSLDG00000022256	rbfox1l	100	81.701	Seriola_lalandi_dorsalis
ENSGMOG00000005040	rbfox1l	100	82.768	ENSSPAG00000016620	rbfox1l	100	83.551	Stegastes_partitus
ENSGMOG00000005040	rbfox1l	96	78.378	ENSTRUG00000015905	rbfox1l	100	78.649	Takifugu_rubripes
ENSGMOG00000005040	rbfox1l	65	79.182	ENSTNIG00000008088	rbfox1l	99	81.343	Tetraodon_nigroviridis
ENSGMOG00000005040	rbfox1l	100	81.984	ENSXMAG00000023471	rbfox1l	100	81.984	Xiphophorus_maculatus