EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000005129 (Gene tree)
Gene ID: -
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 5967 bases
Position: chrGeneScaffold_4611:190593-196559
Accession: ZDB-GENE-060503-321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000005438	MA3	PF02847.17	8.2e-22	1	1
ENSGMOP00000005438	MIF4G	PF02854.19	2.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000005601	-	2295	-	ENSGMOP00000005438	765 (aa)	-	UPI00023F0B65

Gene Model

Click here to download ENSGMOG00000005129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000005129's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000005129	nom1	70	63.686	ENSG00000146909	NOM1	80	56.250	Homo_sapiens
ENSGMOG00000005129	nom1	67	75.908	ENSAPOG00000012073	nom1	94	63.454	Acanthochromis_polyacanthus
ENSGMOG00000005129	nom1	89	54.043	ENSAMEG00000001412	NOM1	72	63.198	Ailuropoda_melanoleuca
ENSGMOG00000005129	nom1	67	75.287	ENSACIG00000018050	nom1	71	71.942	Amphilophus_citrinellus
ENSGMOG00000005129	nom1	67	74.761	ENSAOCG00000006229	nom1	94	62.857	Amphiprion_ocellaris
ENSGMOG00000005129	nom1	67	74.761	ENSAPEG00000015994	nom1	94	62.857	Amphiprion_percula
ENSGMOG00000005129	nom1	94	63.302	ENSATEG00000005405	nom1	94	60.994	Anabas_testudineus
ENSGMOG00000005129	nom1	86	53.869	ENSAPLG00000006585	NOM1	80	60.803	Anas_platyrhynchos
ENSGMOG00000005129	nom1	86	53.148	ENSACAG00000011192	NOM1	85	51.644	Anolis_carolinensis
ENSGMOG00000005129	nom1	69	73.684	ENSACLG00000000033	nom1	94	61.290	Astatotilapia_calliptera
ENSGMOG00000005129	nom1	99	50.000	ENSBTAG00000016435	NOM1	61	61.850	Bos_taurus
ENSGMOG00000005129	nom1	99	51.500	ENSCJAG00000004336	NOM1	80	54.944	Callithrix_jacchus
ENSGMOG00000005129	nom1	99	48.696	ENSCAFG00020005121	NOM1	91	50.187	Canis_lupus_dingo
ENSGMOG00000005129	nom1	89	53.592	ENSCHIG00000020102	NOM1	62	62.042	Capra_hircus
ENSGMOG00000005129	nom1	99	51.875	ENSTSYG00000000227	NOM1	80	55.413	Carlito_syrichta
ENSGMOG00000005129	nom1	67	65.058	ENSCAPG00000016273	NOM1	99	65.058	Cavia_aperea
ENSGMOG00000005129	nom1	99	50.062	ENSCPOG00000025538	NOM1	80	52.639	Cavia_porcellus
ENSGMOG00000005129	nom1	72	64.916	ENSCCAG00000014944	NOM1	99	65.242	Cebus_capucinus
ENSGMOG00000005129	nom1	89	55.282	ENSCLAG00000000267	NOM1	61	63.127	Chinchilla_lanigera
ENSGMOG00000005129	nom1	73	62.977	ENSCPBG00000018215	NOM1	71	62.977	Chrysemys_picta_bellii
ENSGMOG00000005129	nom1	66	40.275	ENSCING00000005248	-	73	39.513	Ciona_intestinalis
ENSGMOG00000005129	nom1	67	64.491	ENSCANG00000041984	NOM1	89	64.245	Colobus_angolensis_palliatus
ENSGMOG00000005129	nom1	71	60.364	ENSCGRG00001020293	Nom1	80	54.089	Cricetulus_griseus_chok1gshd
ENSGMOG00000005129	nom1	67	63.056	ENSCGRG00000005405	Nom1	98	62.813	Cricetulus_griseus_crigri
ENSGMOG00000005129	nom1	93	60.268	ENSCSEG00000000932	nom1	90	59.895	Cynoglossus_semilaevis
ENSGMOG00000005129	nom1	99	59.755	ENSCVAG00000007562	nom1	94	58.604	Cyprinodon_variegatus
ENSGMOG00000005129	nom1	67	69.025	ENSDARG00000060027	nom1	100	69.610	Danio_rerio
ENSGMOG00000005129	nom1	67	51.803	ENSDORG00000015682	Nom1	79	49.910	Dipodomys_ordii
ENSGMOG00000005129	nom1	71	36.842	FBgn0035336	CG9004	58	37.800	Drosophila_melanogaster
ENSGMOG00000005129	nom1	61	53.938	ENSETEG00000003104	NOM1	71	53.791	Echinops_telfairi
ENSGMOG00000005129	nom1	56	51.708	ENSEBUG00000010077	nom1	95	52.194	Eptatretus_burgeri
ENSGMOG00000005129	nom1	89	56.421	ENSEASG00005001489	NOM1	79	56.348	Equus_asinus_asinus
ENSGMOG00000005129	nom1	72	61.896	ENSECAG00000007596	NOM1	75	55.882	Equus_caballus
ENSGMOG00000005129	nom1	69	71.992	ENSELUG00000006266	nom1	84	64.649	Esox_lucius
ENSGMOG00000005129	nom1	99	50.639	ENSFCAG00000006467	NOM1	91	51.410	Felis_catus
ENSGMOG00000005129	nom1	91	55.634	ENSFALG00000006904	NOM1	99	54.369	Ficedula_albicollis
ENSGMOG00000005129	nom1	99	50.635	ENSFDAG00000016241	NOM1	84	52.867	Fukomys_damarensis
ENSGMOG00000005129	nom1	99	62.326	ENSFHEG00000015974	nom1	94	62.052	Fundulus_heteroclitus
ENSGMOG00000005129	nom1	88	53.655	ENSGALG00000006437	NOM1	78	52.684	Gallus_gallus
ENSGMOG00000005129	nom1	99	59.601	ENSGAFG00000003211	nom1	94	60.025	Gambusia_affinis
ENSGMOG00000005129	nom1	90	53.501	ENSGAGG00000014347	NOM1	62	63.168	Gopherus_agassizii
ENSGMOG00000005129	nom1	70	63.321	ENSGGOG00000010920	NOM1	74	55.682	Gorilla_gorilla
ENSGMOG00000005129	nom1	100	62.108	ENSHBUG00000014616	nom1	94	61.146	Haplochromis_burtoni
ENSGMOG00000005129	nom1	99	51.238	ENSHGLG00000007392	NOM1	80	55.050	Heterocephalus_glaber_female
ENSGMOG00000005129	nom1	87	64.174	ENSHGLG00100014407	NOM1	77	64.174	Heterocephalus_glaber_male
ENSGMOG00000005129	nom1	100	56.781	ENSIPUG00000013980	nom1	84	60.335	Ictalurus_punctatus
ENSGMOG00000005129	nom1	67	62.620	ENSSTOG00000031736	NOM1	91	62.380	Ictidomys_tridecemlineatus
ENSGMOG00000005129	nom1	63	65.440	ENSJJAG00000011716	Nom1	99	65.440	Jaculus_jaculus
ENSGMOG00000005129	nom1	67	75.143	ENSLBEG00000009252	nom1	94	62.285	Labrus_bergylta
ENSGMOG00000005129	nom1	91	59.161	ENSLACG00000011777	NOM1	86	58.264	Latimeria_chalumnae
ENSGMOG00000005129	nom1	99	59.849	ENSLOCG00000012452	nom1	95	59.701	Lepisosteus_oculatus
ENSGMOG00000005129	nom1	99	48.618	ENSMMUG00000039033	NOM1	79	52.408	Macaca_mulatta
ENSGMOG00000005129	nom1	67	64.231	ENSMLEG00000037062	NOM1	98	64.231	Mandrillus_leucophaeus
ENSGMOG00000005129	nom1	100	62.313	ENSMAMG00000004118	nom1	94	61.222	Mastacembelus_armatus
ENSGMOG00000005129	nom1	69	73.872	ENSMZEG00005000384	nom1	94	61.166	Maylandia_zebra
ENSGMOG00000005129	nom1	90	52.900	ENSMGAG00000005051	NOM1	99	51.389	Meleagris_gallopavo
ENSGMOG00000005129	nom1	99	50.435	ENSMAUG00000017988	Nom1	81	54.286	Mesocricetus_auratus
ENSGMOG00000005129	nom1	69	63.401	ENSMICG00000017531	NOM1	81	55.903	Microcebus_murinus
ENSGMOG00000005129	nom1	72	59.929	ENSMOCG00000015962	Nom1	79	54.843	Microtus_ochrogaster
ENSGMOG00000005129	nom1	100	57.371	ENSMMOG00000004419	nom1	93	56.092	Mola_mola
ENSGMOG00000005129	nom1	94	60.290	ENSMALG00000008800	nom1	83	63.877	Monopterus_albus
ENSGMOG00000005129	nom1	99	49.448	MGP_CAROLIEiJ_G0027043	Nom1	79	53.362	Mus_caroli
ENSGMOG00000005129	nom1	99	50.814	ENSMUSG00000001569	Nom1	79	53.725	Mus_musculus
ENSGMOG00000005129	nom1	99	50.939	MGP_SPRETEiJ_G0028039	Nom1	79	53.725	Mus_spretus
ENSGMOG00000005129	nom1	89	52.237	ENSMPUG00000009745	NOM1	78	59.665	Mustela_putorius_furo
ENSGMOG00000005129	nom1	79	56.423	ENSMLUG00000009129	NOM1	90	60.773	Myotis_lucifugus
ENSGMOG00000005129	nom1	100	61.928	ENSNBRG00000016429	nom1	94	75.096	Neolamprologus_brichardi
ENSGMOG00000005129	nom1	69	62.037	ENSNLEG00000000238	NOM1	90	51.192	Nomascus_leucogenys
ENSGMOG00000005129	nom1	57	64.865	ENSMEUG00000001108	NOM1	52	64.865	Notamacropus_eugenii
ENSGMOG00000005129	nom1	54	55.439	ENSOPRG00000014676	NOM1	68	46.482	Ochotona_princeps
ENSGMOG00000005129	nom1	89	55.058	ENSODEG00000009399	NOM1	77	61.825	Octodon_degus
ENSGMOG00000005129	nom1	69	73.496	ENSONIG00000005958	nom1	100	61.194	Oreochromis_niloticus
ENSGMOG00000005129	nom1	60	62.851	ENSOANG00000006139	-	97	62.851	Ornithorhynchus_anatinus
ENSGMOG00000005129	nom1	99	52.267	ENSOCUG00000004071	-	80	56.125	Oryctolagus_cuniculus
ENSGMOG00000005129	nom1	99	43.846	ENSOCUG00000021448	-	83	53.789	Oryctolagus_cuniculus
ENSGMOG00000005129	nom1	100	61.646	ENSORLG00000010541	nom1	94	60.656	Oryzias_latipes
ENSGMOG00000005129	nom1	98	61.489	ENSORLG00020010789	nom1	94	61.957	Oryzias_latipes_hni
ENSGMOG00000005129	nom1	100	62.374	ENSORLG00015010475	nom1	99	59.769	Oryzias_latipes_hsok
ENSGMOG00000005129	nom1	100	60.556	ENSOMEG00000004219	nom1	94	61.083	Oryzias_melastigma
ENSGMOG00000005129	nom1	67	64.491	ENSOGAG00000001124	NOM1	86	64.245	Otolemur_garnettii
ENSGMOG00000005129	nom1	89	53.372	ENSOARG00000007261	NOM1	70	61.702	Ovis_aries
ENSGMOG00000005129	nom1	99	51.361	ENSPPAG00000041374	NOM1	80	56.108	Pan_paniscus
ENSGMOG00000005129	nom1	89	54.131	ENSPTIG00000013532	NOM1	94	54.020	Panthera_tigris_altaica
ENSGMOG00000005129	nom1	99	51.361	ENSPTRG00000019917	NOM1	80	56.188	Pan_troglodytes
ENSGMOG00000005129	nom1	99	52.190	ENSPANG00000007605	NOM1	80	55.587	Papio_anubis
ENSGMOG00000005129	nom1	96	58.672	ENSPKIG00000005825	nom1	85	57.555	Paramormyrops_kingsleyae
ENSGMOG00000005129	nom1	72	61.525	ENSPSIG00000017848	NOM1	87	63.931	Pelodiscus_sinensis
ENSGMOG00000005129	nom1	97	61.716	ENSPMGG00000002577	nom1	64	74.330	Periophthalmus_magnuspinnatus
ENSGMOG00000005129	nom1	99	51.439	ENSPEMG00000024180	Nom1	78	55.143	Peromyscus_maniculatus_bairdii
ENSGMOG00000005129	nom1	99	48.982	ENSPCIG00000027941	NOM1	80	54.184	Phascolarctos_cinereus
ENSGMOG00000005129	nom1	99	56.886	ENSPFOG00000015771	nom1	94	61.310	Poecilia_formosa
ENSGMOG00000005129	nom1	69	72.744	ENSPLAG00000007856	nom1	94	59.577	Poecilia_latipinna
ENSGMOG00000005129	nom1	99	61.347	ENSPMEG00000014155	nom1	94	61.187	Poecilia_mexicana
ENSGMOG00000005129	nom1	99	48.635	ENSPPYG00000018222	NOM1	79	52.279	Pongo_abelii
ENSGMOG00000005129	nom1	72	56.542	ENSPCAG00000000440	NOM1	66	56.542	Procavia_capensis
ENSGMOG00000005129	nom1	67	64.093	ENSPCOG00000015222	NOM1	98	64.093	Propithecus_coquereli
ENSGMOG00000005129	nom1	89	53.468	ENSPVAG00000014760	NOM1	79	54.429	Pteropus_vampyrus
ENSGMOG00000005129	nom1	69	73.120	ENSPNYG00000006975	nom1	94	74.138	Pundamilia_nyererei
ENSGMOG00000005129	nom1	87	70.286	ENSPNAG00000011085	nom1	81	60.912	Pygocentrus_nattereri
ENSGMOG00000005129	nom1	99	48.886	ENSRNOG00000048969	AABR07059041.1	83	51.571	Rattus_norvegicus
ENSGMOG00000005129	nom1	99	52.333	ENSRBIG00000037042	NOM1	80	55.666	Rhinopithecus_bieti
ENSGMOG00000005129	nom1	99	51.754	ENSRROG00000037293	NOM1	80	55.524	Rhinopithecus_roxellana
ENSGMOG00000005129	nom1	67	63.584	ENSSHAG00000017998	-	76	63.584	Sarcophilus_harrisii
ENSGMOG00000005129	nom1	53	56.618	ENSSHAG00000002835	-	99	56.618	Sarcophilus_harrisii
ENSGMOG00000005129	nom1	63	69.295	ENSSFOG00015003196	nom1	100	69.295	Scleropages_formosus
ENSGMOG00000005129	nom1	100	61.146	ENSSMAG00000011047	nom1	94	61.519	Scophthalmus_maximus
ENSGMOG00000005129	nom1	100	61.928	ENSSDUG00000006834	nom1	94	63.041	Seriola_dumerili
ENSGMOG00000005129	nom1	100	62.594	ENSSLDG00000021812	nom1	94	62.716	Seriola_lalandi_dorsalis
ENSGMOG00000005129	nom1	91	47.580	ENSSPUG00000002556	NOM1	98	61.176	Sphenodon_punctatus
ENSGMOG00000005129	nom1	69	74.535	ENSSPAG00000000953	nom1	94	62.917	Stegastes_partitus
ENSGMOG00000005129	nom1	96	52.450	ENSTGUG00000000702	-	99	54.290	Taeniopygia_guttata
ENSGMOG00000005129	nom1	73	68.861	ENSTRUG00000010239	nom1	94	60.728	Takifugu_rubripes
ENSGMOG00000005129	nom1	100	59.181	ENSTNIG00000012783	nom1	100	57.973	Tetraodon_nigroviridis
ENSGMOG00000005129	nom1	88	54.058	ENSTTRG00000009691	NOM1	80	53.468	Tursiops_truncatus
ENSGMOG00000005129	nom1	89	54.993	ENSUAMG00000025450	NOM1	79	55.382	Ursus_americanus
ENSGMOG00000005129	nom1	89	55.347	ENSUMAG00000014275	NOM1	95	55.222	Ursus_maritimus
ENSGMOG00000005129	nom1	89	54.820	ENSVVUG00000002608	NOM1	60	62.741	Vulpes_vulpes
ENSGMOG00000005129	nom1	96	51.876	ENSXETG00000021611	nom1	82	67.647	Xenopus_tropicalis
ENSGMOG00000005129	nom1	72	70.324	ENSXMAG00000002451	nom1	94	61.021	Xiphophorus_maculatus