EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000005145 (Gene tree)
Gene ID: -
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 2
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 10727 bases
Position: chrGeneScaffold_3590:1435244-1445970
Accession: ZDB-GENE-031118-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000005470	RRM_1	PF00076.22	7.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000005633	-	1365	-	ENSGMOP00000005470	455 (aa)	-	UPI00023F0B76

Gene Model

Click here to download ENSGMOG00000005145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000005145's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000005145	cstf2	99	56.799	ENSG00000101811	CSTF2	81	88.462	Homo_sapiens
ENSGMOG00000005145	cstf2	99	76.875	ENSAPOG00000005630	cstf2	95	76.778	Acanthochromis_polyacanthus
ENSGMOG00000005145	cstf2	99	55.058	ENSAMEG00000002082	CSTF2	99	50.417	Ailuropoda_melanoleuca
ENSGMOG00000005145	cstf2	99	79.870	ENSACIG00000012852	cstf2	95	77.874	Amphilophus_citrinellus
ENSGMOG00000005145	cstf2	99	76.827	ENSAOCG00000020905	cstf2	96	76.569	Amphiprion_ocellaris
ENSGMOG00000005145	cstf2	99	76.409	ENSAPEG00000006526	cstf2	96	76.778	Amphiprion_percula
ENSGMOG00000005145	cstf2	99	72.671	ENSATEG00000018186	cstf2	95	71.992	Anabas_testudineus
ENSGMOG00000005145	cstf2	97	55.499	ENSAPLG00000007255	CSTF2	82	76.724	Anas_platyrhynchos
ENSGMOG00000005145	cstf2	99	58.824	ENSANAG00000022342	CSTF2	79	77.966	Aotus_nancymaae
ENSGMOG00000005145	cstf2	99	75.420	ENSACLG00000000779	cstf2	92	76.471	Astatotilapia_calliptera
ENSGMOG00000005145	cstf2	67	98.438	ENSAMXG00000021477	cstf2	76	98.438	Astyanax_mexicanus
ENSGMOG00000005145	cstf2	99	57.712	ENSBTAG00000003547	CSTF2	99	53.646	Bos_taurus
ENSGMOG00000005145	cstf2	99	57.715	ENSCJAG00000004422	CSTF2	83	77.966	Callithrix_jacchus
ENSGMOG00000005145	cstf2	99	56.897	ENSCAFG00000017551	CSTF2	99	53.793	Canis_familiaris
ENSGMOG00000005145	cstf2	99	55.667	ENSCAFG00020007619	CSTF2	79	78.390	Canis_lupus_dingo
ENSGMOG00000005145	cstf2	99	57.812	ENSCHIG00000016994	CSTF2	99	53.188	Capra_hircus
ENSGMOG00000005145	cstf2	99	57.143	ENSTSYG00000006529	CSTF2	99	57.241	Carlito_syrichta
ENSGMOG00000005145	cstf2	99	55.938	ENSCPOG00000015255	CSTF2	85	86.538	Cavia_porcellus
ENSGMOG00000005145	cstf2	99	58.824	ENSCCAG00000032975	CSTF2	83	77.966	Cebus_capucinus
ENSGMOG00000005145	cstf2	99	59.002	ENSCATG00000022835	CSTF2	83	77.966	Cercocebus_atys
ENSGMOG00000005145	cstf2	99	56.799	ENSCLAG00000001904	CSTF2	87	84.906	Chinchilla_lanigera
ENSGMOG00000005145	cstf2	99	55.574	ENSCSAG00000010360	CSTF2	83	77.966	Chlorocebus_sabaeus
ENSGMOG00000005145	cstf2	99	65.358	ENSCPBG00000014293	CSTF2	74	90.000	Chrysemys_picta_bellii
ENSGMOG00000005145	cstf2	99	59.002	ENSCANG00000030612	CSTF2	83	77.966	Colobus_angolensis_palliatus
ENSGMOG00000005145	cstf2	99	56.357	ENSCGRG00001023023	Cstf2	99	55.000	Cricetulus_griseus_chok1gshd
ENSGMOG00000005145	cstf2	99	58.437	ENSCGRG00000003897	Cstf2	99	57.041	Cricetulus_griseus_crigri
ENSGMOG00000005145	cstf2	99	74.686	ENSCVAG00000005731	cstf2	95	73.585	Cyprinodon_variegatus
ENSGMOG00000005145	cstf2	80	100.000	ENSDARG00000090788	cstf2	72	100.000	Danio_rerio
ENSGMOG00000005145	cstf2	99	58.722	ENSDORG00000007195	Cstf2	85	87.013	Dipodomys_ordii
ENSGMOG00000005145	cstf2	99	55.167	ENSEASG00005001216	CSTF2	99	51.667	Equus_asinus_asinus
ENSGMOG00000005145	cstf2	99	56.379	ENSECAG00000009325	CSTF2	99	58.810	Equus_caballus
ENSGMOG00000005145	cstf2	99	57.093	ENSFCAG00000007000	CSTF2	99	58.581	Felis_catus
ENSGMOG00000005145	cstf2	91	53.333	ENSFALG00000003859	CSTF2	83	74.510	Ficedula_albicollis
ENSGMOG00000005145	cstf2	99	56.799	ENSFDAG00000002416	CSTF2	79	77.966	Fukomys_damarensis
ENSGMOG00000005145	cstf2	99	72.516	ENSFHEG00000017065	cstf2	92	71.610	Fundulus_heteroclitus
ENSGMOG00000005145	cstf2	99	58.763	ENSGALG00000006760	CSTF2	99	60.000	Gallus_gallus
ENSGMOG00000005145	cstf2	99	73.608	ENSGAFG00000020027	cstf2	96	71.779	Gambusia_affinis
ENSGMOG00000005145	cstf2	100	78.745	ENSGACG00000017326	cstf2	97	77.530	Gasterosteus_aculeatus
ENSGMOG00000005145	cstf2	99	54.351	ENSGAGG00000006037	CSTF2	76	90.000	Gopherus_agassizii
ENSGMOG00000005145	cstf2	99	59.002	ENSGGOG00000022267	CSTF2	99	57.011	Gorilla_gorilla
ENSGMOG00000005145	cstf2	99	74.948	ENSHBUG00000016183	cstf2	92	76.042	Haplochromis_burtoni
ENSGMOG00000005145	cstf2	99	56.454	ENSHGLG00000000659	-	88	83.636	Heterocephalus_glaber_female
ENSGMOG00000005145	cstf2	99	56.454	ENSHGLG00100001130	-	88	83.636	Heterocephalus_glaber_male
ENSGMOG00000005145	cstf2	100	75.000	ENSHCOG00000005157	cstf2	96	75.104	Hippocampus_comes
ENSGMOG00000005145	cstf2	99	69.368	ENSIPUG00000017839	cstf2	97	61.477	Ictalurus_punctatus
ENSGMOG00000005145	cstf2	99	56.870	ENSSTOG00000023445	CSTF2	87	84.906	Ictidomys_tridecemlineatus
ENSGMOG00000005145	cstf2	99	56.282	ENSJJAG00000020507	Cstf2	87	84.906	Jaculus_jaculus
ENSGMOG00000005145	cstf2	99	72.141	ENSKMAG00000001068	cstf2	96	73.958	Kryptolebias_marmoratus
ENSGMOG00000005145	cstf2	67	96.667	ENSLBEG00000028720	cstf2	78	96.667	Labrus_bergylta
ENSGMOG00000005145	cstf2	99	59.014	ENSLACG00000015927	CSTF2	99	56.729	Latimeria_chalumnae
ENSGMOG00000005145	cstf2	99	70.736	ENSLOCG00000015300	cstf2	77	100.000	Lepisosteus_oculatus
ENSGMOG00000005145	cstf2	99	56.014	ENSLAFG00000000474	CSTF2	83	78.390	Loxodonta_africana
ENSGMOG00000005145	cstf2	99	59.002	ENSMFAG00000043888	CSTF2	83	77.966	Macaca_fascicularis
ENSGMOG00000005145	cstf2	99	59.002	ENSMMUG00000013008	CSTF2	99	54.839	Macaca_mulatta
ENSGMOG00000005145	cstf2	99	59.002	ENSMNEG00000041824	CSTF2	83	77.966	Macaca_nemestrina
ENSGMOG00000005145	cstf2	99	59.002	ENSMLEG00000036870	CSTF2	83	77.966	Mandrillus_leucophaeus
ENSGMOG00000005145	cstf2	97	76.709	ENSMAMG00000020364	cstf2	96	75.375	Mastacembelus_armatus
ENSGMOG00000005145	cstf2	99	76.050	ENSMZEG00005007200	cstf2	96	76.681	Maylandia_zebra
ENSGMOG00000005145	cstf2	99	55.575	ENSMAUG00000000965	Cstf2	99	55.060	Mesocricetus_auratus
ENSGMOG00000005145	cstf2	99	57.465	ENSMICG00000014121	CSTF2	72	88.776	Microcebus_murinus
ENSGMOG00000005145	cstf2	99	56.131	ENSMOCG00000008081	Cstf2	99	55.613	Microtus_ochrogaster
ENSGMOG00000005145	cstf2	100	71.674	ENSMMOG00000000538	cstf2	96	73.753	Mola_mola
ENSGMOG00000005145	cstf2	99	56.732	MGP_CAROLIEiJ_G0033383	Cstf2	86	85.443	Mus_caroli
ENSGMOG00000005145	cstf2	99	56.732	ENSMUSG00000031256	Cstf2	86	85.443	Mus_musculus
ENSGMOG00000005145	cstf2	99	56.577	MGP_PahariEiJ_G0031923	Cstf2	79	78.059	Mus_pahari
ENSGMOG00000005145	cstf2	99	72.378	MGP_SPRETEiJ_G0034548	Cstf2	86	85.443	Mus_spretus
ENSGMOG00000005145	cstf2	99	52.765	ENSMPUG00000002339	CSTF2	79	78.390	Mustela_putorius_furo
ENSGMOG00000005145	cstf2	99	52.932	ENSMLUG00000004598	CSTF2	71	88.265	Myotis_lucifugus
ENSGMOG00000005145	cstf2	99	56.604	ENSNGAG00000021985	Cstf2	99	54.905	Nannospalax_galili
ENSGMOG00000005145	cstf2	96	72.985	ENSNBRG00000021694	cstf2	100	74.066	Neolamprologus_brichardi
ENSGMOG00000005145	cstf2	99	59.002	ENSNLEG00000007510	CSTF2	99	57.011	Nomascus_leucogenys
ENSGMOG00000005145	cstf2	99	60.180	ENSMEUG00000011186	-	86	80.952	Notamacropus_eugenii
ENSGMOG00000005145	cstf2	78	89.474	ENSOPRG00000003106	CSTF2	57	89.474	Ochotona_princeps
ENSGMOG00000005145	cstf2	99	57.045	ENSODEG00000002059	CSTF2	99	52.595	Octodon_degus
ENSGMOG00000005145	cstf2	93	94.118	ENSONIG00000002631	cstf2	67	100.000	Oreochromis_niloticus
ENSGMOG00000005145	cstf2	90	85.714	ENSOANG00000004208	CSTF2	69	90.000	Ornithorhynchus_anatinus
ENSGMOG00000005145	cstf2	99	56.627	ENSOCUG00000010468	CSTF2	99	49.047	Oryctolagus_cuniculus
ENSGMOG00000005145	cstf2	99	72.708	ENSORLG00000001380	cstf2	96	73.333	Oryzias_latipes
ENSGMOG00000005145	cstf2	99	72.708	ENSORLG00020021917	cstf2	96	73.542	Oryzias_latipes_hni
ENSGMOG00000005145	cstf2	99	72.917	ENSORLG00015011996	cstf2	96	73.542	Oryzias_latipes_hsok
ENSGMOG00000005145	cstf2	100	75.884	ENSOMEG00000015507	cstf2	96	74.274	Oryzias_melastigma
ENSGMOG00000005145	cstf2	99	51.254	ENSOGAG00000011192	CSTF2	79	77.872	Otolemur_garnettii
ENSGMOG00000005145	cstf2	99	57.812	ENSOARG00000001022	CSTF2	99	52.852	Ovis_aries
ENSGMOG00000005145	cstf2	99	59.002	ENSPPAG00000031804	CSTF2	99	57.011	Pan_paniscus
ENSGMOG00000005145	cstf2	99	57.093	ENSPPRG00000022492	CSTF2	99	58.810	Panthera_pardus
ENSGMOG00000005145	cstf2	99	56.747	ENSPTIG00000009922	CSTF2	99	58.352	Panthera_tigris_altaica
ENSGMOG00000005145	cstf2	99	59.002	ENSPTRG00000022090	CSTF2	99	57.011	Pan_troglodytes
ENSGMOG00000005145	cstf2	99	59.002	ENSPANG00000002303	CSTF2	83	77.966	Papio_anubis
ENSGMOG00000005145	cstf2	99	68.648	ENSPKIG00000005033	cstf2	97	67.573	Paramormyrops_kingsleyae
ENSGMOG00000005145	cstf2	99	78.936	ENSPMGG00000006534	cstf2	95	77.991	Periophthalmus_magnuspinnatus
ENSGMOG00000005145	cstf2	99	55.746	ENSPEMG00000019415	Cstf2	99	55.077	Peromyscus_maniculatus_bairdii
ENSGMOG00000005145	cstf2	99	72.819	ENSPLAG00000011176	cstf2	96	70.994	Poecilia_latipinna
ENSGMOG00000005145	cstf2	99	72.617	ENSPMEG00000017743	cstf2	96	72.414	Poecilia_mexicana
ENSGMOG00000005145	cstf2	65	74.074	ENSPREG00000011481	cstf2	96	66.419	Poecilia_reticulata
ENSGMOG00000005145	cstf2	99	55.574	ENSPPYG00000020541	CSTF2	99	51.839	Pongo_abelii
ENSGMOG00000005145	cstf2	99	57.904	ENSPCOG00000027744	CSTF2	99	54.937	Propithecus_coquereli
ENSGMOG00000005145	cstf2	97	45.070	ENSPVAG00000008342	CSTF2	86	52.252	Pteropus_vampyrus
ENSGMOG00000005145	cstf2	99	75.264	ENSPNYG00000010852	cstf2	78	93.243	Pundamilia_nyererei
ENSGMOG00000005145	cstf2	99	70.800	ENSPNAG00000018887	cstf2	97	60.947	Pygocentrus_nattereri
ENSGMOG00000005145	cstf2	99	56.477	ENSRNOG00000048025	Cstf2	99	55.862	Rattus_norvegicus
ENSGMOG00000005145	cstf2	99	58.961	ENSRBIG00000030745	CSTF2	99	54.856	Rhinopithecus_bieti
ENSGMOG00000005145	cstf2	99	59.002	ENSRROG00000045042	CSTF2	83	77.966	Rhinopithecus_roxellana
ENSGMOG00000005145	cstf2	99	58.824	ENSSBOG00000021649	CSTF2	79	77.966	Saimiri_boliviensis_boliviensis
ENSGMOG00000005145	cstf2	91	83.673	ENSSHAG00000003681	CSTF2	76	79.358	Sarcophilus_harrisii
ENSGMOG00000005145	cstf2	99	66.797	ENSSFOG00015006348	cstf2	97	66.862	Scleropages_formosus
ENSGMOG00000005145	cstf2	100	76.261	ENSSMAG00000013463	cstf2	96	76.681	Scophthalmus_maximus
ENSGMOG00000005145	cstf2	50	80.328	ENSSPUG00000005288	-	51	79.325	Sphenodon_punctatus
ENSGMOG00000005145	cstf2	99	59.252	ENSSSCG00000012486	CSTF2	99	61.098	Sus_scrofa
ENSGMOG00000005145	cstf2	99	58.081	ENSTGUG00000002253	CSTF2	99	57.009	Taeniopygia_guttata
ENSGMOG00000005145	cstf2	100	74.349	ENSTNIG00000016860	cstf2	99	73.200	Tetraodon_nigroviridis
ENSGMOG00000005145	cstf2	99	56.477	ENSTTRG00000013556	CSTF2	99	61.337	Tursiops_truncatus
ENSGMOG00000005145	cstf2	99	56.239	ENSUAMG00000026605	CSTF2	99	58.581	Ursus_americanus
ENSGMOG00000005145	cstf2	99	60.183	ENSUMAG00000012417	CSTF2	78	77.966	Ursus_maritimus
ENSGMOG00000005145	cstf2	80	67.463	ENSVPAG00000006466	CSTF2	60	58.924	Vicugna_pacos
ENSGMOG00000005145	cstf2	99	56.971	ENSVVUG00000004717	CSTF2	99	53.793	Vulpes_vulpes
ENSGMOG00000005145	cstf2	91	86.538	ENSXETG00000009642	cstf2	80	92.500	Xenopus_tropicalis
ENSGMOG00000005145	cstf2	67	98.507	ENSXCOG00000016436	cstf2	70	98.507	Xiphophorus_couchianus
ENSGMOG00000005145	cstf2	65	76.623	ENSXMAG00000013524	cstf2	96	68.665	Xiphophorus_maculatus