EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000005207 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: La ribonucleoprotein domain family%2C member 1B
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 20387 bases
Position: chrGeneScaffold_1066:59478-79864
Accession: ZDB-GENE-030131-4154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000005577	La	PF05383.17	4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000005743	-	3006	-	ENSGMOP00000005577	1002 (aa)	-	UPI00023F078D

Gene Model

Click here to download ENSGMOG00000005207's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000005207's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000005207	larp1b	80	67.347	ENSG00000138709	LARP1B	75	66.667	Homo_sapiens
ENSGMOG00000005207	larp1b	85	75.646	ENSAPOG00000020101	larp1b	88	69.737	Acanthochromis_polyacanthus
ENSGMOG00000005207	larp1b	80	73.801	ENSACIG00000023890	larp1b	87	68.750	Amphilophus_citrinellus
ENSGMOG00000005207	larp1b	78	64.418	ENSAOCG00000014268	larp1b	85	74.242	Amphiprion_ocellaris
ENSGMOG00000005207	larp1b	87	73.333	ENSAPEG00000004126	larp1b	87	70.234	Amphiprion_percula
ENSGMOG00000005207	larp1b	87	73.702	ENSATEG00000017849	larp1b	86	73.356	Anabas_testudineus
ENSGMOG00000005207	larp1b	70	70.677	ENSAPLG00000010129	LARP1B	80	70.301	Anas_platyrhynchos
ENSGMOG00000005207	larp1b	73	74.790	ENSACAG00000011338	LARP1B	78	73.529	Anolis_carolinensis
ENSGMOG00000005207	larp1b	85	75.277	ENSACLG00000011948	larp1b	88	69.408	Astatotilapia_calliptera
ENSGMOG00000005207	larp1b	77	56.877	ENSAMXG00000006805	larp1b	78	63.230	Astyanax_mexicanus
ENSGMOG00000005207	larp1b	81	55.007	ENSBTAG00000012135	LARP1B	81	58.654	Bos_taurus
ENSGMOG00000005207	larp1b	62	66.327	ENSCJAG00000003338	LARP1B	83	65.986	Callithrix_jacchus
ENSGMOG00000005207	larp1b	70	71.111	ENSCAFG00000003831	LARP1B	87	70.741	Canis_familiaris
ENSGMOG00000005207	larp1b	62	67.347	ENSCAFG00020018899	LARP1B	75	67.910	Canis_lupus_dingo
ENSGMOG00000005207	larp1b	60	71.218	ENSCHIG00000023144	LARP1B	75	68.421	Capra_hircus
ENSGMOG00000005207	larp1b	62	67.687	ENSCCAG00000021948	LARP1B	83	65.986	Cebus_capucinus
ENSGMOG00000005207	larp1b	62	68.027	ENSCATG00000013541	LARP1B	83	66.327	Cercocebus_atys
ENSGMOG00000005207	larp1b	62	69.048	ENSCSAG00000003582	LARP1B	83	67.347	Chlorocebus_sabaeus
ENSGMOG00000005207	larp1b	62	58.163	ENSCHOG00000005354	LARP1B	69	57.823	Choloepus_hoffmanni
ENSGMOG00000005207	larp1b	79	66.316	ENSCPBG00000017480	LARP1B	78	65.517	Chrysemys_picta_bellii
ENSGMOG00000005207	larp1b	62	68.027	ENSCANG00000026958	LARP1B	72	66.327	Colobus_angolensis_palliatus
ENSGMOG00000005207	larp1b	85	76.866	ENSCSEG00000013519	larp1b	88	69.355	Cynoglossus_semilaevis
ENSGMOG00000005207	larp1b	85	74.539	ENSCVAG00000005046	larp1b	87	69.492	Cyprinodon_variegatus
ENSGMOG00000005207	larp1b	86	57.547	ENSDARG00000061169	larp1b	86	67.081	Danio_rerio
ENSGMOG00000005207	larp1b	71	55.521	ENSETEG00000012497	LARP1B	79	55.521	Echinops_telfairi
ENSGMOG00000005207	larp1b	71	71.020	ENSEBUG00000003668	larp1b	78	69.796	Eptatretus_burgeri
ENSGMOG00000005207	larp1b	62	63.987	ENSEASG00005018106	LARP1B	75	67.910	Equus_asinus_asinus
ENSGMOG00000005207	larp1b	81	54.709	ENSECAG00000001088	LARP1B	85	54.722	Equus_caballus
ENSGMOG00000005207	larp1b	62	70.718	ENSELUG00000023774	larp1b	86	67.925	Esox_lucius
ENSGMOG00000005207	larp1b	59	72.727	ENSFALG00000008098	LARP1B	66	72.348	Ficedula_albicollis
ENSGMOG00000005207	larp1b	88	72.093	ENSFHEG00000010264	larp1b	85	71.761	Fundulus_heteroclitus
ENSGMOG00000005207	larp1b	73	70.787	ENSGALG00000010207	LARP1B	78	70.412	Gallus_gallus
ENSGMOG00000005207	larp1b	75	76.087	ENSGAFG00000012012	larp1b	82	75.725	Gambusia_affinis
ENSGMOG00000005207	larp1b	95	70.418	ENSGACG00000004609	larp1b	94	72.026	Gasterosteus_aculeatus
ENSGMOG00000005207	larp1b	77	69.742	ENSGAGG00000017209	LARP1B	75	69.373	Gopherus_agassizii
ENSGMOG00000005207	larp1b	62	68.027	ENSGGOG00000015900	LARP1B	83	66.327	Gorilla_gorilla
ENSGMOG00000005207	larp1b	85	75.277	ENSHBUG00000009730	larp1b	88	69.408	Haplochromis_burtoni
ENSGMOG00000005207	larp1b	66	61.693	ENSHCOG00000000918	larp1b	92	70.847	Hippocampus_comes
ENSGMOG00000005207	larp1b	78	69.256	ENSIPUG00000012138	larp1b	81	68.153	Ictalurus_punctatus
ENSGMOG00000005207	larp1b	83	71.617	ENSKMAG00000011589	larp1b	85	71.287	Kryptolebias_marmoratus
ENSGMOG00000005207	larp1b	85	75.277	ENSLBEG00000005655	larp1b	87	69.180	Labrus_bergylta
ENSGMOG00000005207	larp1b	80	75.000	ENSLACG00000015247	LARP1B	77	74.638	Latimeria_chalumnae
ENSGMOG00000005207	larp1b	71	77.122	ENSLOCG00000010684	larp1b	77	76.753	Lepisosteus_oculatus
ENSGMOG00000005207	larp1b	62	68.707	ENSMFAG00000002218	LARP1B	83	67.007	Macaca_fascicularis
ENSGMOG00000005207	larp1b	62	68.707	ENSMMUG00000021347	LARP1B	83	67.007	Macaca_mulatta
ENSGMOG00000005207	larp1b	60	68.707	ENSMNEG00000030406	LARP1B	89	67.007	Macaca_nemestrina
ENSGMOG00000005207	larp1b	62	68.707	ENSMLEG00000009306	LARP1B	71	67.007	Mandrillus_leucophaeus
ENSGMOG00000005207	larp1b	89	69.180	ENSMAMG00000000081	larp1b	87	70.903	Mastacembelus_armatus
ENSGMOG00000005207	larp1b	60	75.277	ENSMZEG00005002545	larp1b	84	69.408	Maylandia_zebra
ENSGMOG00000005207	larp1b	68	73.684	ENSMGAG00000004809	LARP1B	83	73.279	Meleagris_gallopavo
ENSGMOG00000005207	larp1b	67	56.170	ENSMICG00000036111	LARP1B	91	55.824	Microcebus_murinus
ENSGMOG00000005207	larp1b	79	68.367	ENSMODG00000012300	LARP1B	76	68.027	Monodelphis_domestica
ENSGMOG00000005207	larp1b	88	70.395	ENSMALG00000003638	larp1b	88	70.066	Monopterus_albus
ENSGMOG00000005207	larp1b	79	57.933	ENSMPUG00000017365	LARP1B	81	57.143	Mustela_putorius_furo
ENSGMOG00000005207	larp1b	73	70.111	ENSMLUG00000010229	LARP1B	82	69.742	Myotis_lucifugus
ENSGMOG00000005207	larp1b	74	66.372	ENSNBRG00000023846	larp1b	85	66.372	Neolamprologus_brichardi
ENSGMOG00000005207	larp1b	62	67.119	ENSNLEG00000013819	LARP1B	75	66.418	Nomascus_leucogenys
ENSGMOG00000005207	larp1b	59	68.367	ENSMEUG00000010308	LARP1B	67	68.027	Notamacropus_eugenii
ENSGMOG00000005207	larp1b	63	61.616	ENSOPRG00000005478	LARP1B	70	61.616	Ochotona_princeps
ENSGMOG00000005207	larp1b	78	74.908	ENSONIG00000012386	larp1b	86	74.539	Oreochromis_niloticus
ENSGMOG00000005207	larp1b	68	53.186	ENSOCUG00000013330	LARP1B	89	53.465	Oryctolagus_cuniculus
ENSGMOG00000005207	larp1b	86	72.202	ENSORLG00000017954	larp1b	88	65.815	Oryzias_latipes
ENSGMOG00000005207	larp1b	93	61.017	ENSORLG00020013081	larp1b	91	61.299	Oryzias_latipes_hni
ENSGMOG00000005207	larp1b	93	61.299	ENSORLG00015009580	larp1b	91	61.299	Oryzias_latipes_hsok
ENSGMOG00000005207	larp1b	88	69.595	ENSOMEG00000004210	larp1b	88	68.627	Oryzias_melastigma
ENSGMOG00000005207	larp1b	78	57.895	ENSOGAG00000005771	LARP1B	91	57.530	Otolemur_garnettii
ENSGMOG00000005207	larp1b	77	54.571	ENSOARG00000015300	LARP1B	88	55.301	Ovis_aries
ENSGMOG00000005207	larp1b	62	68.027	ENSPPAG00000030439	LARP1B	75	66.418	Pan_paniscus
ENSGMOG00000005207	larp1b	62	67.687	ENSPTRG00000016437	LARP1B	83	65.986	Pan_troglodytes
ENSGMOG00000005207	larp1b	62	68.707	ENSPANG00000012488	LARP1B	83	67.007	Papio_anubis
ENSGMOG00000005207	larp1b	77	54.628	ENSPKIG00000014360	larp1b	87	54.938	Paramormyrops_kingsleyae
ENSGMOG00000005207	larp1b	77	69.663	ENSPSIG00000012885	LARP1B	85	69.288	Pelodiscus_sinensis
ENSGMOG00000005207	larp1b	63	69.032	ENSPMGG00000007207	larp1b	80	68.710	Periophthalmus_magnuspinnatus
ENSGMOG00000005207	larp1b	74	51.645	ENSPMAG00000002700	larp1b	90	50.670	Petromyzon_marinus
ENSGMOG00000005207	larp1b	71	73.256	ENSPCIG00000026516	LARP1B	94	56.056	Phascolarctos_cinereus
ENSGMOG00000005207	larp1b	55	67.089	ENSPFOG00000022837	-	89	67.619	Poecilia_formosa
ENSGMOG00000005207	larp1b	85	76.753	ENSPFOG00000019519	larp1b	85	76.384	Poecilia_formosa
ENSGMOG00000005207	larp1b	86	75.725	ENSPLAG00000007115	larp1b	89	64.758	Poecilia_latipinna
ENSGMOG00000005207	larp1b	85	76.753	ENSPMEG00000001224	larp1b	85	76.384	Poecilia_mexicana
ENSGMOG00000005207	larp1b	62	65.646	ENSPCAG00000007546	LARP1B	70	65.306	Procavia_capensis
ENSGMOG00000005207	larp1b	53	73.214	ENSPCOG00000021874	LARP1B	81	73.585	Propithecus_coquereli
ENSGMOG00000005207	larp1b	67	52.774	ENSPVAG00000005373	LARP1B	78	52.422	Pteropus_vampyrus
ENSGMOG00000005207	larp1b	60	75.277	ENSPNYG00000017357	larp1b	83	69.408	Pundamilia_nyererei
ENSGMOG00000005207	larp1b	77	60.087	ENSPNAG00000008823	larp1b	80	69.256	Pygocentrus_nattereri
ENSGMOG00000005207	larp1b	62	68.367	ENSRROG00000030771	LARP1B	83	66.667	Rhinopithecus_roxellana
ENSGMOG00000005207	larp1b	50	75.000	ENSSHAG00000014474	LARP1B	77	75.472	Sarcophilus_harrisii
ENSGMOG00000005207	larp1b	74	76.753	ENSSMAG00000006347	larp1b	84	71.475	Scophthalmus_maximus
ENSGMOG00000005207	larp1b	85	77.491	ENSSDUG00000004182	larp1b	87	70.779	Seriola_dumerili
ENSGMOG00000005207	larp1b	80	78.229	ENSSLDG00000014613	larp1b	92	70.915	Seriola_lalandi_dorsalis
ENSGMOG00000005207	larp1b	62	65.172	ENSSPUG00000011837	LARP1B	73	64.828	Sphenodon_punctatus
ENSGMOG00000005207	larp1b	91	64.749	ENSSPAG00000017772	larp1b	86	72.822	Stegastes_partitus
ENSGMOG00000005207	larp1b	81	55.446	ENSSSCG00000034280	LARP1B	87	55.461	Sus_scrofa
ENSGMOG00000005207	larp1b	59	69.517	ENSTGUG00000002098	-	74	69.145	Taeniopygia_guttata
ENSGMOG00000005207	larp1b	89	69.375	ENSTRUG00000005612	larp1b	90	69.062	Takifugu_rubripes
ENSGMOG00000005207	larp1b	76	76.493	ENSTNIG00000012398	larp1b	88	76.119	Tetraodon_nigroviridis
ENSGMOG00000005207	larp1b	54	64.311	ENSTBEG00000004177	LARP1B	62	64.158	Tupaia_belangeri
ENSGMOG00000005207	larp1b	62	59.184	ENSTTRG00000012984	LARP1B	70	59.184	Tursiops_truncatus
ENSGMOG00000005207	larp1b	79	55.745	ENSUMAG00000007373	LARP1B	89	55.477	Ursus_maritimus
ENSGMOG00000005207	larp1b	57	75.000	ENSVPAG00000007223	LARP1B	64	75.472	Vicugna_pacos
ENSGMOG00000005207	larp1b	67	56.170	ENSVVUG00000011307	LARP1B	91	55.275	Vulpes_vulpes
ENSGMOG00000005207	larp1b	77	69.259	ENSXETG00000022512	larp1b	80	68.889	Xenopus_tropicalis
ENSGMOG00000005207	larp1b	66	75.725	ENSXCOG00000004435	larp1b	75	75.362	Xiphophorus_couchianus
ENSGMOG00000005207	larp1b	86	75.725	ENSXMAG00000008150	larp1b	85	75.362	Xiphophorus_maculatus