EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000005375 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 2418 bases
Position: chrGeneScaffold_4572:18151-20568
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000005717	PARP	PF00644.20	2e-36	1	1
ENSGMOP00000005712	PARP	PF00644.20	2.9e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000005885	-	597	-	ENSGMOP00000005717	199 (aa)	-	UPI00023F09FB
ENSGMOT00000005880	-	588	-	ENSGMOP00000005712	196 (aa)	-	UPI00023F09FA

Gene Model

Click here to download ENSGMOG00000005375's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000005375's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000005375	-	99	54.592	ENSGMOG00000016384	-	50	54.592
ENSGMOG00000005375	-	89	85.714	ENSGMOG00000005403	-	100	85.714
ENSGMOG00000005375	-	99	42.056	ENSGMOG00000011168	PARP11	65	42.056
ENSGMOG00000005375	-	99	35.266	ENSGMOG00000011231	-	62	35.266
ENSGMOG00000005375	-	92	84.530	ENSGMOG00000005410	-	99	84.530
ENSGMOG00000005375	-	99	90.769	ENSGMOG00000001046	-	85	88.827
ENSGMOG00000005375	-	99	40.196	ENSGMOG00000009093	TIPARP	55	40.196

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000005375	-	99	51.282	ENSG00000059378	PARP12	88	56.716	Homo_sapiens
ENSGMOG00000005375	-	99	53.093	ENSDNOG00000009685	-	50	53.093	Dasypus_novemcinctus
ENSGMOG00000005375	-	91	47.191	ENSEBUG00000003295	-	67	47.191	Eptatretus_burgeri
ENSGMOG00000005375	-	99	53.846	ENSLOCG00000016971	-	82	53.846	Lepisosteus_oculatus
ENSGMOG00000005375	-	91	56.425	ENSMZEG00005018262	-	60	56.425	Maylandia_zebra
ENSGMOG00000005375	-	58	46.087	ENSPMAG00000006865	-	63	46.087	Petromyzon_marinus
ENSGMOG00000005375	-	86	48.259	ENSPMAG00000006346	-	99	48.756	Petromyzon_marinus