EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000005410 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 1685 bases
Position: chrGeneScaffold_4572:52497-54181
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000005774	PARP	PF00644.20	1.7e-36	1	1
ENSGMOP00000005794	PARP	PF00644.20	2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000005943	-	588	-	ENSGMOP00000005774	196 (aa)	-	UPI00023F0AC6
ENSGMOT00000005962	-	546	-	ENSGMOP00000005794	182 (aa)	-	UPI00023F0AC7

Gene Model

Click here to download ENSGMOG00000005410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000005410's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000005410	-	97	42.132	ENSGMOG00000011168	PARP11	60	42.132
ENSGMOG00000005410	-	98	41.398	ENSGMOG00000009093	TIPARP	50	41.398
ENSGMOG00000005410	-	99	35.751	ENSGMOG00000011231	-	58	35.751
ENSGMOG00000005410	-	99	83.425	ENSGMOG00000001046	-	84	82.022
ENSGMOG00000005410	-	96	84.571	ENSGMOG00000005403	-	100	84.571
ENSGMOG00000005410	-	99	84.530	ENSGMOG00000005375	-	92	84.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000005410	-	98	53.073	ENSG00000059378	PARP12	88	59.701	Homo_sapiens
ENSGMOG00000005410	-	100	44.505	ENSEBUG00000003295	-	69	44.505	Eptatretus_burgeri
ENSGMOG00000005410	-	98	56.425	ENSLOCG00000016971	-	75	56.425	Lepisosteus_oculatus
ENSGMOG00000005410	-	98	54.749	ENSMZEG00005018262	-	60	54.749	Maylandia_zebra
ENSGMOG00000005410	-	93	45.771	ENSPMAG00000006346	-	99	46.269	Petromyzon_marinus
ENSGMOG00000005410	-	52	49.485	ENSPMAG00000006865	-	53	49.485	Petromyzon_marinus