EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000005514 (Gene tree)
Gene ID: -
Gene Symbol: aco1
Alias: IRP1|wu:fo75b03
Full Name: aconitase 1%2C soluble
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 22511 bases
Position: chrGeneScaffold_4175:285-22795
Accession: ZDB-GENE-031118-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000005884	Aconitase	PF00330.20	1.6e-164	1	1
ENSGMOP00000005884	Aconitase_C	PF00694.19	2.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000006057	-	2673	-	ENSGMOP00000005884	891 (aa)	-	UPI00023F06DD

Gene Model

Click here to download ENSGMOG00000005514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000005514's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000005514	aco1	99	57.867	ENSGMOG00000009184	ireb2	91	57.867
ENSGMOG00000005514	aco1	65	37.000	ENSGMOG00000001946	-	67	36.410

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000005514	aco1	99	78.805	ENSG00000122729	ACO1	99	78.805	Homo_sapiens
ENSGMOG00000005514	aco1	99	84.876	ENSAPOG00000008670	aco1	99	84.876	Acanthochromis_polyacanthus
ENSGMOG00000005514	aco1	99	78.941	ENSAMEG00000003746	ACO1	99	78.941	Ailuropoda_melanoleuca
ENSGMOG00000005514	aco1	99	84.529	ENSACIG00000014377	aco1	99	84.529	Amphilophus_citrinellus
ENSGMOG00000005514	aco1	99	85.553	ENSAOCG00000007699	aco1	99	85.553	Amphiprion_ocellaris
ENSGMOG00000005514	aco1	99	85.440	ENSAPEG00000014370	aco1	99	85.440	Amphiprion_percula
ENSGMOG00000005514	aco1	99	85.314	ENSATEG00000000560	aco1	99	85.314	Anabas_testudineus
ENSGMOG00000005514	aco1	99	77.452	ENSAPLG00000015490	ACO1	99	77.452	Anas_platyrhynchos
ENSGMOG00000005514	aco1	96	77.648	ENSACAG00000001541	ACO1	99	77.648	Anolis_carolinensis
ENSGMOG00000005514	aco1	99	77.565	ENSANAG00000003359	ACO1	99	77.565	Aotus_nancymaae
ENSGMOG00000005514	aco1	99	84.641	ENSACLG00000007755	aco1	99	84.641	Astatotilapia_calliptera
ENSGMOG00000005514	aco1	99	82.638	ENSAMXG00000002499	aco1	99	82.638	Astyanax_mexicanus
ENSGMOG00000005514	aco1	99	78.692	ENSBTAG00000000555	ACO1	99	78.692	Bos_taurus
ENSGMOG00000005514	aco1	99	77.903	ENSCJAG00000007687	ACO1	99	77.903	Callithrix_jacchus
ENSGMOG00000005514	aco1	99	77.928	ENSCAFG00000001786	ACO1	99	77.928	Canis_familiaris
ENSGMOG00000005514	aco1	99	78.016	ENSCAFG00020014553	ACO1	99	78.016	Canis_lupus_dingo
ENSGMOG00000005514	aco1	99	78.805	ENSCHIG00000007667	ACO1	99	78.805	Capra_hircus
ENSGMOG00000005514	aco1	99	79.143	ENSTSYG00000004179	ACO1	99	79.143	Carlito_syrichta
ENSGMOG00000005514	aco1	99	62.754	ENSCAPG00000007254	ACO1	99	62.641	Cavia_aperea
ENSGMOG00000005514	aco1	99	78.217	ENSCPOG00000003768	ACO1	99	78.217	Cavia_porcellus
ENSGMOG00000005514	aco1	99	77.565	ENSCCAG00000022465	ACO1	99	77.565	Cebus_capucinus
ENSGMOG00000005514	aco1	99	78.579	ENSCATG00000045333	ACO1	99	78.579	Cercocebus_atys
ENSGMOG00000005514	aco1	99	77.878	ENSCLAG00000002487	ACO1	99	77.878	Chinchilla_lanigera
ENSGMOG00000005514	aco1	99	78.805	ENSCSAG00000009824	ACO1	99	78.805	Chlorocebus_sabaeus
ENSGMOG00000005514	aco1	90	64.521	ENSCHOG00000008996	ACO1	90	64.361	Choloepus_hoffmanni
ENSGMOG00000005514	aco1	99	77.903	ENSCPBG00000008077	ACO1	99	77.903	Chrysemys_picta_bellii
ENSGMOG00000005514	aco1	99	78.579	ENSCANG00000014847	ACO1	99	78.579	Colobus_angolensis_palliatus
ENSGMOG00000005514	aco1	99	79.571	ENSCGRG00001024337	Aco1	99	79.571	Cricetulus_griseus_chok1gshd
ENSGMOG00000005514	aco1	99	78.894	ENSCGRG00000004877	-	99	78.894	Cricetulus_griseus_crigri
ENSGMOG00000005514	aco1	99	80.157	ENSCSEG00000018262	aco1	99	80.157	Cynoglossus_semilaevis
ENSGMOG00000005514	aco1	99	77.878	ENSCVAG00000020264	aco1	99	77.878	Cyprinodon_variegatus
ENSGMOG00000005514	aco1	99	81.285	ENSDARG00000026376	aco1	99	81.285	Danio_rerio
ENSGMOG00000005514	aco1	99	78.579	ENSDNOG00000003951	ACO1	99	78.579	Dasypus_novemcinctus
ENSGMOG00000005514	aco1	99	79.684	ENSDORG00000014246	Aco1	99	79.684	Dipodomys_ordii
ENSGMOG00000005514	aco1	78	66.479	ENSETEG00000012415	-	77	66.193	Echinops_telfairi
ENSGMOG00000005514	aco1	99	56.946	ENSEBUG00000015441	aco1	97	57.158	Eptatretus_burgeri
ENSGMOG00000005514	aco1	99	79.481	ENSEASG00005004602	ACO1	99	79.481	Equus_asinus_asinus
ENSGMOG00000005514	aco1	99	79.369	ENSECAG00000014846	ACO1	99	79.369	Equus_caballus
ENSGMOG00000005514	aco1	99	67.869	ENSEEUG00000015174	ACO1	99	67.869	Erinaceus_europaeus
ENSGMOG00000005514	aco1	99	83.315	ENSELUG00000016812	aco1	97	83.315	Esox_lucius
ENSGMOG00000005514	aco1	99	78.129	ENSFCAG00000001293	ACO1	99	78.129	Felis_catus
ENSGMOG00000005514	aco1	99	77.790	ENSFALG00000001167	ACO1	99	77.790	Ficedula_albicollis
ENSGMOG00000005514	aco1	99	77.991	ENSFDAG00000016058	ACO1	99	77.991	Fukomys_damarensis
ENSGMOG00000005514	aco1	99	82.638	ENSFHEG00000005619	aco1	99	82.638	Fundulus_heteroclitus
ENSGMOG00000005514	aco1	99	77.565	ENSGALG00000002162	ACO1	99	77.565	Gallus_gallus
ENSGMOG00000005514	aco1	99	83.632	ENSGACG00000001637	aco1	99	83.632	Gasterosteus_aculeatus
ENSGMOG00000005514	aco1	99	78.129	ENSGAGG00000023315	ACO1	99	78.129	Gopherus_agassizii
ENSGMOG00000005514	aco1	99	78.692	ENSGGOG00000016306	ACO1	99	78.692	Gorilla_gorilla
ENSGMOG00000005514	aco1	99	84.494	ENSHBUG00000008952	aco1	99	84.494	Haplochromis_burtoni
ENSGMOG00000005514	aco1	99	78.330	ENSHGLG00000018922	Aco1	99	78.330	Heterocephalus_glaber_female
ENSGMOG00000005514	aco1	99	78.330	ENSHGLG00100000149	Aco1	99	78.330	Heterocephalus_glaber_male
ENSGMOG00000005514	aco1	99	80.717	ENSHCOG00000015881	aco1	99	80.717	Hippocampus_comes
ENSGMOG00000005514	aco1	99	81.440	ENSIPUG00000020088	ACO1	99	81.440	Ictalurus_punctatus
ENSGMOG00000005514	aco1	99	79.458	ENSSTOG00000006942	ACO1	99	79.458	Ictidomys_tridecemlineatus
ENSGMOG00000005514	aco1	99	78.781	ENSJJAG00000013824	Aco1	99	78.781	Jaculus_jaculus
ENSGMOG00000005514	aco1	99	83.857	ENSKMAG00000015759	aco1	99	83.857	Kryptolebias_marmoratus
ENSGMOG00000005514	aco1	99	82.379	ENSLBEG00000013866	aco1	99	82.379	Labrus_bergylta
ENSGMOG00000005514	aco1	75	69.436	ENSLACG00000000936	ACO1	99	69.254	Latimeria_chalumnae
ENSGMOG00000005514	aco1	99	79.865	ENSLOCG00000011082	aco1	99	79.865	Lepisosteus_oculatus
ENSGMOG00000005514	aco1	99	76.550	ENSLAFG00000013470	ACO1	99	76.550	Loxodonta_africana
ENSGMOG00000005514	aco1	99	78.692	ENSMFAG00000001702	ACO1	99	78.692	Macaca_fascicularis
ENSGMOG00000005514	aco1	99	78.805	ENSMMUG00000008196	ACO1	99	78.805	Macaca_mulatta
ENSGMOG00000005514	aco1	99	78.579	ENSMNEG00000045040	ACO1	99	78.579	Macaca_nemestrina
ENSGMOG00000005514	aco1	99	78.805	ENSMLEG00000005636	ACO1	99	78.805	Mandrillus_leucophaeus
ENSGMOG00000005514	aco1	99	84.417	ENSMAMG00000002915	aco1	99	84.417	Mastacembelus_armatus
ENSGMOG00000005514	aco1	99	81.564	ENSMZEG00005012733	aco1	100	81.229	Maylandia_zebra
ENSGMOG00000005514	aco1	99	63.187	ENSMGAG00000008851	ACO1	99	63.187	Meleagris_gallopavo
ENSGMOG00000005514	aco1	99	79.007	ENSMAUG00000021408	Aco1	99	79.007	Mesocricetus_auratus
ENSGMOG00000005514	aco1	99	78.918	ENSMICG00000006540	ACO1	99	78.918	Microcebus_murinus
ENSGMOG00000005514	aco1	99	79.345	ENSMOCG00000015393	Aco1	99	79.345	Microtus_ochrogaster
ENSGMOG00000005514	aco1	99	83.183	ENSMMOG00000020282	aco1	99	83.183	Mola_mola
ENSGMOG00000005514	aco1	99	78.129	ENSMODG00000004463	ACO1	99	78.129	Monodelphis_domestica
ENSGMOG00000005514	aco1	99	84.312	ENSMALG00000019764	aco1	99	84.312	Monopterus_albus
ENSGMOG00000005514	aco1	99	79.797	MGP_CAROLIEiJ_G0025892	Aco1	99	79.797	Mus_caroli
ENSGMOG00000005514	aco1	99	79.571	ENSMUSG00000028405	Aco1	99	79.571	Mus_musculus
ENSGMOG00000005514	aco1	99	79.458	MGP_PahariEiJ_G0024015	Aco1	99	79.458	Mus_pahari
ENSGMOG00000005514	aco1	99	79.684	MGP_SPRETEiJ_G0026841	Aco1	99	79.684	Mus_spretus
ENSGMOG00000005514	aco1	99	79.143	ENSMPUG00000004340	ACO1	99	79.143	Mustela_putorius_furo
ENSGMOG00000005514	aco1	99	77.001	ENSMLUG00000003029	ACO1	99	77.001	Myotis_lucifugus
ENSGMOG00000005514	aco1	99	79.233	ENSNGAG00000005703	Aco1	99	79.233	Nannospalax_galili
ENSGMOG00000005514	aco1	99	72.131	ENSNBRG00000008973	aco1	97	87.261	Neolamprologus_brichardi
ENSGMOG00000005514	aco1	99	78.354	ENSNLEG00000003409	ACO1	99	78.354	Nomascus_leucogenys
ENSGMOG00000005514	aco1	89	75.057	ENSMEUG00000014756	ACO1	89	75.057	Notamacropus_eugenii
ENSGMOG00000005514	aco1	99	74.746	ENSOPRG00000016791	ACO1	99	74.746	Ochotona_princeps
ENSGMOG00000005514	aco1	99	74.041	ENSODEG00000015432	-	99	74.041	Octodon_degus
ENSGMOG00000005514	aco1	99	76.185	ENSODEG00000001240	-	99	76.185	Octodon_degus
ENSGMOG00000005514	aco1	99	84.382	ENSONIG00000019869	aco1	99	84.382	Oreochromis_niloticus
ENSGMOG00000005514	aco1	78	81.740	ENSOANG00000012132	ACO1	97	81.740	Ornithorhynchus_anatinus
ENSGMOG00000005514	aco1	99	77.703	ENSOCUG00000015960	ACO1	99	77.480	Oryctolagus_cuniculus
ENSGMOG00000005514	aco1	99	84.893	ENSORLG00000020656	aco1	99	84.893	Oryzias_latipes
ENSGMOG00000005514	aco1	99	84.555	ENSORLG00020010991	aco1	99	84.555	Oryzias_latipes_hni
ENSGMOG00000005514	aco1	99	84.667	ENSORLG00015011785	aco1	99	84.763	Oryzias_latipes_hsok
ENSGMOG00000005514	aco1	99	82.340	ENSOMEG00000000660	aco1	99	82.340	Oryzias_melastigma
ENSGMOG00000005514	aco1	99	78.918	ENSOGAG00000010522	ACO1	99	78.918	Otolemur_garnettii
ENSGMOG00000005514	aco1	99	78.805	ENSOARG00000014707	ACO1	98	78.805	Ovis_aries
ENSGMOG00000005514	aco1	99	78.805	ENSPPAG00000033498	ACO1	99	78.805	Pan_paniscus
ENSGMOG00000005514	aco1	99	77.903	ENSPPRG00000009875	ACO1	99	77.903	Panthera_pardus
ENSGMOG00000005514	aco1	99	77.790	ENSPTIG00000016606	ACO1	98	77.790	Panthera_tigris_altaica
ENSGMOG00000005514	aco1	99	78.805	ENSPTRG00000020843	ACO1	99	78.805	Pan_troglodytes
ENSGMOG00000005514	aco1	99	78.805	ENSPANG00000025270	ACO1	99	78.805	Papio_anubis
ENSGMOG00000005514	aco1	99	79.036	ENSPKIG00000023168	aco1	99	79.392	Paramormyrops_kingsleyae
ENSGMOG00000005514	aco1	99	77.565	ENSPSIG00000008030	ACO1	99	77.565	Pelodiscus_sinensis
ENSGMOG00000005514	aco1	99	83.802	ENSPMGG00000020708	aco1	99	83.802	Periophthalmus_magnuspinnatus
ENSGMOG00000005514	aco1	99	79.458	ENSPEMG00000018464	Aco1	99	79.458	Peromyscus_maniculatus_bairdii
ENSGMOG00000005514	aco1	99	77.201	ENSPCIG00000029321	ACO1	99	77.995	Phascolarctos_cinereus
ENSGMOG00000005514	aco1	99	81.348	ENSPFOG00000013405	aco1	99	81.348	Poecilia_formosa
ENSGMOG00000005514	aco1	90	81.875	ENSPLAG00000023422	aco1	97	82.080	Poecilia_latipinna
ENSGMOG00000005514	aco1	90	82.000	ENSPMEG00000011800	aco1	98	82.000	Poecilia_mexicana
ENSGMOG00000005514	aco1	99	81.369	ENSPREG00000021791	aco1	99	81.369	Poecilia_reticulata
ENSGMOG00000005514	aco1	99	78.467	ENSPPYG00000019150	ACO1	95	78.467	Pongo_abelii
ENSGMOG00000005514	aco1	77	84.906	ENSPCAG00000013222	ACO1	91	84.906	Procavia_capensis
ENSGMOG00000005514	aco1	88	79.468	ENSPCOG00000021198	ACO1	99	79.468	Propithecus_coquereli
ENSGMOG00000005514	aco1	96	74.122	ENSPVAG00000002372	ACO1	99	74.122	Pteropus_vampyrus
ENSGMOG00000005514	aco1	99	84.494	ENSPNYG00000009425	aco1	99	84.494	Pundamilia_nyererei
ENSGMOG00000005514	aco1	99	82.751	ENSPNAG00000017918	aco1	99	82.751	Pygocentrus_nattereri
ENSGMOG00000005514	aco1	99	79.120	ENSRNOG00000005849	Aco1	99	79.120	Rattus_norvegicus
ENSGMOG00000005514	aco1	99	78.579	ENSRBIG00000034592	ACO1	99	78.579	Rhinopithecus_bieti
ENSGMOG00000005514	aco1	99	78.918	ENSRROG00000042672	ACO1	99	78.918	Rhinopithecus_roxellana
ENSGMOG00000005514	aco1	99	78.129	ENSSBOG00000026008	ACO1	99	78.129	Saimiri_boliviensis_boliviensis
ENSGMOG00000005514	aco1	99	77.452	ENSSHAG00000008924	ACO1	99	77.452	Sarcophilus_harrisii
ENSGMOG00000005514	aco1	99	81.038	ENSSFOG00015018941	aco1	99	81.038	Scleropages_formosus
ENSGMOG00000005514	aco1	75	87.892	ENSSMAG00000018908	aco1	80	87.820	Scophthalmus_maximus
ENSGMOG00000005514	aco1	99	84.641	ENSSDUG00000002984	aco1	99	84.641	Seriola_dumerili
ENSGMOG00000005514	aco1	99	84.753	ENSSLDG00000013952	aco1	99	84.753	Seriola_lalandi_dorsalis
ENSGMOG00000005514	aco1	96	75.906	ENSSARG00000008437	ACO1	99	75.906	Sorex_araneus
ENSGMOG00000005514	aco1	99	76.637	ENSSPUG00000002916	ACO1	99	76.637	Sphenodon_punctatus
ENSGMOG00000005514	aco1	99	84.537	ENSSPAG00000019147	aco1	99	84.537	Stegastes_partitus
ENSGMOG00000005514	aco1	99	78.805	ENSSSCG00000023807	ACO1	99	78.805	Sus_scrofa
ENSGMOG00000005514	aco1	99	77.452	ENSTGUG00000001505	ACO1	99	77.452	Taeniopygia_guttata
ENSGMOG00000005514	aco1	99	81.348	ENSTRUG00000006888	aco1	100	81.236	Takifugu_rubripes
ENSGMOG00000005514	aco1	99	78.918	ENSTNIG00000005288	aco1	99	78.918	Tetraodon_nigroviridis
ENSGMOG00000005514	aco1	99	75.648	ENSTBEG00000012369	ACO1	99	75.648	Tupaia_belangeri
ENSGMOG00000005514	aco1	99	78.467	ENSTTRG00000016991	ACO1	99	78.467	Tursiops_truncatus
ENSGMOG00000005514	aco1	99	78.918	ENSUAMG00000020699	ACO1	99	78.918	Ursus_americanus
ENSGMOG00000005514	aco1	99	78.918	ENSUMAG00000005807	ACO1	99	78.918	Ursus_maritimus
ENSGMOG00000005514	aco1	95	78.143	ENSVPAG00000009876	ACO1	99	78.143	Vicugna_pacos
ENSGMOG00000005514	aco1	99	78.016	ENSVVUG00000021152	ACO1	91	78.016	Vulpes_vulpes
ENSGMOG00000005514	aco1	99	77.303	ENSXETG00000009184	aco1	99	77.303	Xenopus_tropicalis
ENSGMOG00000005514	aco1	50	80.090	ENSXCOG00000005638	aco1	96	80.090	Xiphophorus_couchianus
ENSGMOG00000005514	aco1	99	81.481	ENSXMAG00000023603	aco1	99	81.481	Xiphophorus_maculatus