EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000005670 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-32e23.4
Alias: -
Full Name: si:dkey-32e23.4
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 15548 bases
Position: chrGeneScaffold_2102:228530-244077
Accession: ZDB-GENE-081105-41
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000006040	MMR_HSR1	PF01926.23	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000006215	-	2004	-	ENSGMOP00000006040	667 (aa)	-	UPI00023F09AE

Gene Model

Click here to download ENSGMOG00000005670's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000005670's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000005670	si:dkey-32e23.4	97	61.207	ENSGMOG00000001805	-	100	61.207
ENSGMOG00000005670	si:dkey-32e23.4	100	59.720	ENSGMOG00000001033	dnm1l	99	59.720

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000005670	si:dkey-32e23.4	100	78.443	ENSCVAG00000010346	si:dkey-32e23.4	100	78.443	Cyprinodon_variegatus
ENSGMOG00000005670	si:dkey-32e23.4	100	76.198	ENSELUG00000017713	si:dkey-32e23.4	100	76.198	Esox_lucius
ENSGMOG00000005670	si:dkey-32e23.4	100	77.994	ENSFHEG00000019298	si:dkey-32e23.4	100	77.994	Fundulus_heteroclitus
ENSGMOG00000005670	si:dkey-32e23.4	100	78.892	ENSHCOG00000018024	si:dkey-32e23.4	100	78.892	Hippocampus_comes
ENSGMOG00000005670	si:dkey-32e23.4	100	78.176	ENSIPUG00000007113	si:dkey-32e23.4	100	78.176	Ictalurus_punctatus
ENSGMOG00000005670	si:dkey-32e23.4	100	79.940	ENSLBEG00000004848	si:dkey-32e23.4	100	79.940	Labrus_bergylta
ENSGMOG00000005670	si:dkey-32e23.4	100	79.641	ENSMALG00000006625	si:dkey-32e23.4	100	79.641	Monopterus_albus
ENSGMOG00000005670	si:dkey-32e23.4	100	77.246	ENSORLG00000011119	si:dkey-32e23.4	92	86.567	Oryzias_latipes
ENSGMOG00000005670	si:dkey-32e23.4	100	76.254	ENSORLG00020006829	si:dkey-32e23.4	100	76.254	Oryzias_latipes_hni
ENSGMOG00000005670	si:dkey-32e23.4	100	76.946	ENSORLG00015021365	si:dkey-32e23.4	100	76.946	Oryzias_latipes_hsok
ENSGMOG00000005670	si:dkey-32e23.4	100	76.254	ENSOMEG00000009143	si:dkey-32e23.4	100	76.254	Oryzias_melastigma
ENSGMOG00000005670	si:dkey-32e23.4	100	77.844	ENSPLAG00000023009	si:dkey-32e23.4	100	77.844	Poecilia_latipinna
ENSGMOG00000005670	si:dkey-32e23.4	100	77.844	ENSPMEG00000009231	si:dkey-32e23.4	100	77.844	Poecilia_mexicana
ENSGMOG00000005670	si:dkey-32e23.4	100	73.692	ENSPNAG00000020681	si:dkey-32e23.4	100	73.692	Pygocentrus_nattereri
ENSGMOG00000005670	si:dkey-32e23.4	100	79.940	ENSSMAG00000007121	si:dkey-32e23.4	96	79.940	Scophthalmus_maximus
ENSGMOG00000005670	si:dkey-32e23.4	100	78.144	ENSSDUG00000019756	si:dkey-32e23.4	100	78.144	Seriola_dumerili
ENSGMOG00000005670	si:dkey-32e23.4	100	78.144	ENSSPAG00000011027	si:dkey-32e23.4	100	78.144	Stegastes_partitus