EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000005756 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 38670 bases
Position: chrGeneScaffold_3789:740558-779227
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000006180	ResIII	PF04851.15	7.6e-09	1	1
ENSGMOP00000006180	BRK	PF07533.16	3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000006356	-	4839	-	ENSGMOP00000006180	1613 (aa)	-	UPI00023F0B45

Gene Model

Click here to download ENSGMOG00000005756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000005756's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000005756	-	80	79.775	ENSGMOG00000002649	smarca4a	86	79.775
ENSGMOG00000005756	-	87	70.765	ENSGMOG00000014229	SMARCA2	83	71.845

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000005756	-	87	80.153	ENSG00000127616	SMARCA4	99	92.219	Homo_sapiens
ENSGMOG00000005756	-	70	77.598	ENSAPOG00000003509	smarca4a	89	78.298	Acanthochromis_polyacanthus
ENSGMOG00000005756	-	89	86.830	ENSAPOG00000004542	SMARCA4	90	87.071	Acanthochromis_polyacanthus
ENSGMOG00000005756	-	87	78.819	ENSAMEG00000010868	SMARCA4	93	79.258	Ailuropoda_melanoleuca
ENSGMOG00000005756	-	90	80.637	ENSACIG00000021550	smarca4a	90	81.255	Amphilophus_citrinellus
ENSGMOG00000005756	-	80	85.753	ENSACIG00000003035	-	84	86.179	Amphilophus_citrinellus
ENSGMOG00000005756	-	88	85.530	ENSAOCG00000009450	-	88	86.728	Amphiprion_ocellaris
ENSGMOG00000005756	-	74	81.782	ENSAOCG00000019167	smarca4a	90	82.574	Amphiprion_ocellaris
ENSGMOG00000005756	-	74	81.881	ENSAPEG00000015559	smarca4a	90	82.673	Amphiprion_percula
ENSGMOG00000005756	-	91	84.880	ENSAPEG00000023108	-	90	85.322	Amphiprion_percula
ENSGMOG00000005756	-	90	80.258	ENSATEG00000011524	smarca4a	90	81.046	Anabas_testudineus
ENSGMOG00000005756	-	93	83.821	ENSATEG00000001094	-	92	84.953	Anabas_testudineus
ENSGMOG00000005756	-	87	79.503	ENSANAG00000036991	SMARCA4	93	79.446	Aotus_nancymaae
ENSGMOG00000005756	-	90	80.429	ENSACLG00000000163	smarca4a	88	82.927	Astatotilapia_calliptera
ENSGMOG00000005756	-	87	86.739	ENSACLG00000008638	-	92	86.438	Astatotilapia_calliptera
ENSGMOG00000005756	-	89	84.686	ENSAMXG00000011238	-	89	85.517	Astyanax_mexicanus
ENSGMOG00000005756	-	84	78.777	ENSAMXG00000021023	smarca4a	86	79.391	Astyanax_mexicanus
ENSGMOG00000005756	-	87	79.553	ENSBTAG00000019220	SMARCA4	92	80.687	Bos_taurus
ENSGMOG00000005756	-	87	78.763	ENSCJAG00000005936	SMARCA4	93	79.446	Callithrix_jacchus
ENSGMOG00000005756	-	87	79.381	ENSCAFG00000017584	SMARCA4	92	80.687	Canis_familiaris
ENSGMOG00000005756	-	87	79.381	ENSCAFG00020024620	SMARCA4	91	80.687	Canis_lupus_dingo
ENSGMOG00000005756	-	87	75.214	ENSCHIG00000015318	SMARCA4	92	75.835	Capra_hircus
ENSGMOG00000005756	-	87	79.639	ENSTSYG00000012966	SMARCA4	93	79.747	Carlito_syrichta
ENSGMOG00000005756	-	83	80.332	ENSCAPG00000015932	SMARCA4	86	81.261	Cavia_aperea
ENSGMOG00000005756	-	87	79.846	ENSCPOG00000015549	SMARCA4	92	80.891	Cavia_porcellus
ENSGMOG00000005756	-	87	75.701	ENSCCAG00000031660	SMARCA4	93	75.646	Cebus_capucinus
ENSGMOG00000005756	-	87	79.503	ENSCATG00000029530	SMARCA4	92	80.720	Cercocebus_atys
ENSGMOG00000005756	-	88	79.639	ENSCLAG00000011946	SMARCA4	90	80.805	Chinchilla_lanigera
ENSGMOG00000005756	-	87	79.983	ENSCPBG00000009994	SMARCA4	92	80.739	Chrysemys_picta_bellii
ENSGMOG00000005756	-	87	93.103	ENSCANG00000036013	SMARCA4	89	93.103	Colobus_angolensis_palliatus
ENSGMOG00000005756	-	85	79.983	ENSCGRG00001016732	Smarca4	92	80.496	Cricetulus_griseus_chok1gshd
ENSGMOG00000005756	-	85	79.983	ENSCGRG00000017242	Smarca4	92	80.496	Cricetulus_griseus_crigri
ENSGMOG00000005756	-	90	79.776	ENSCSEG00000014771	smarca4a	90	80.482	Cynoglossus_semilaevis
ENSGMOG00000005756	-	86	85.185	ENSCVAG00000003018	-	91	84.514	Cyprinodon_variegatus
ENSGMOG00000005756	-	90	79.331	ENSCVAG00000006979	smarca4a	91	80.017	Cyprinodon_variegatus
ENSGMOG00000005756	-	85	83.862	ENSDARG00000104339	SMARCA4	89	84.810	Danio_rerio
ENSGMOG00000005756	-	89	81.119	ENSDARG00000077226	smarca4a	93	81.803	Danio_rerio
ENSGMOG00000005756	-	83	78.218	ENSDNOG00000048847	SMARCA4	90	82.353	Dasypus_novemcinctus
ENSGMOG00000005756	-	73	79.062	ENSDORG00000002544	Smarca4	84	80.262	Dipodomys_ordii
ENSGMOG00000005756	-	77	76.112	ENSETEG00000013361	SMARCA4	84	76.311	Echinops_telfairi
ENSGMOG00000005756	-	87	79.467	ENSEASG00005006167	SMARCA4	91	80.429	Equus_asinus_asinus
ENSGMOG00000005756	-	87	79.553	ENSECAG00000008334	SMARCA4	93	80.515	Equus_caballus
ENSGMOG00000005756	-	80	78.093	ENSELUG00000023232	-	86	79.124	Esox_lucius
ENSGMOG00000005756	-	93	80.565	ENSELUG00000010247	smarca4a	90	80.667	Esox_lucius
ENSGMOG00000005756	-	87	79.966	ENSFCAG00000004894	SMARCA4	93	80.667	Felis_catus
ENSGMOG00000005756	-	80	82.065	ENSFALG00000004208	SMARCA4	87	82.518	Ficedula_albicollis
ENSGMOG00000005756	-	81	81.983	ENSFDAG00000012237	SMARCA4	91	82.969	Fukomys_damarensis
ENSGMOG00000005756	-	86	85.185	ENSFHEG00000007902	-	93	84.979	Fundulus_heteroclitus
ENSGMOG00000005756	-	93	79.588	ENSFHEG00000010182	smarca4a	93	80.189	Fundulus_heteroclitus
ENSGMOG00000005756	-	59	87.429	ENSGALG00000047145	SMARCA4	91	87.853	Gallus_gallus
ENSGMOG00000005756	-	82	85.185	ENSGAFG00000008827	-	84	83.333	Gambusia_affinis
ENSGMOG00000005756	-	80	79.485	ENSGAFG00000014900	smarca4a	92	80.274	Gambusia_affinis
ENSGMOG00000005756	-	93	86.964	ENSGACG00000016033	-	93	87.325	Gasterosteus_aculeatus
ENSGMOG00000005756	-	90	79.334	ENSGACG00000006691	smarca4a	90	80.171	Gasterosteus_aculeatus
ENSGMOG00000005756	-	85	79.983	ENSGAGG00000016757	SMARCA4	92	80.739	Gopherus_agassizii
ENSGMOG00000005756	-	87	79.503	ENSGGOG00000009882	SMARCA4	92	80.720	Gorilla_gorilla
ENSGMOG00000005756	-	90	81.561	ENSHBUG00000021172	smarca4a	90	81.373	Haplochromis_burtoni
ENSGMOG00000005756	-	90	83.763	ENSHBUG00000005447	-	93	84.378	Haplochromis_burtoni
ENSGMOG00000005756	-	88	80.119	ENSHGLG00000010519	SMARCA4	93	80.667	Heterocephalus_glaber_female
ENSGMOG00000005756	-	88	79.177	ENSHGLG00100013774	SMARCA4	92	79.863	Heterocephalus_glaber_male
ENSGMOG00000005756	-	87	82.455	ENSHCOG00000009510	smarca4a	90	82.986	Hippocampus_comes
ENSGMOG00000005756	-	91	82.732	ENSIPUG00000016346	-	90	83.076	Ictalurus_punctatus
ENSGMOG00000005756	-	90	80.911	ENSIPUG00000006107	smarca4a	90	81.787	Ictalurus_punctatus
ENSGMOG00000005756	-	87	80.119	ENSSTOG00000007939	SMARCA4	93	80.753	Ictidomys_tridecemlineatus
ENSGMOG00000005756	-	85	80.034	ENSJJAG00000012877	Smarca4	93	80.838	Jaculus_jaculus
ENSGMOG00000005756	-	90	79.657	ENSKMAG00000011931	smarca4a	90	80.739	Kryptolebias_marmoratus
ENSGMOG00000005756	-	86	84.622	ENSKMAG00000019518	-	93	84.979	Kryptolebias_marmoratus
ENSGMOG00000005756	-	87	80.818	ENSLBEG00000017383	smarca4a	88	81.357	Labrus_bergylta
ENSGMOG00000005756	-	83	83.333	ENSLBEG00000020655	-	83	83.333	Labrus_bergylta
ENSGMOG00000005756	-	85	80.617	ENSLOCG00000007820	smarca4a	85	81.491	Lepisosteus_oculatus
ENSGMOG00000005756	-	87	79.467	ENSLAFG00000001433	SMARCA4	92	80.687	Loxodonta_africana
ENSGMOG00000005756	-	87	80.282	ENSMFAG00000032146	SMARCA4	93	79.545	Macaca_fascicularis
ENSGMOG00000005756	-	87	93.103	ENSMMUG00000012042	SMARCA4	97	80.112	Macaca_mulatta
ENSGMOG00000005756	-	87	80.282	ENSMNEG00000028512	SMARCA4	92	80.720	Macaca_nemestrina
ENSGMOG00000005756	-	87	93.103	ENSMLEG00000034976	SMARCA4	89	93.103	Mandrillus_leucophaeus
ENSGMOG00000005756	-	93	84.708	ENSMAMG00000002841	-	92	86.618	Mastacembelus_armatus
ENSGMOG00000005756	-	90	80.052	ENSMAMG00000009256	smarca4a	90	80.928	Mastacembelus_armatus
ENSGMOG00000005756	-	90	80.515	ENSMZEG00005003889	smarca4a	90	80.961	Maylandia_zebra
ENSGMOG00000005756	-	87	85.740	ENSMZEG00005023861	-	92	86.166	Maylandia_zebra
ENSGMOG00000005756	-	85	80.051	ENSMAUG00000020731	Smarca4	93	80.496	Mesocricetus_auratus
ENSGMOG00000005756	-	87	79.467	ENSMICG00000009806	SMARCA4	92	80.687	Microcebus_murinus
ENSGMOG00000005756	-	85	80.392	ENSMOCG00000022209	Smarca4	92	80.582	Microtus_ochrogaster
ENSGMOG00000005756	-	84	80.364	ENSMMOG00000007571	smarca4a	89	80.814	Mola_mola
ENSGMOG00000005756	-	90	80.924	ENSMMOG00000008466	-	86	83.333	Mola_mola
ENSGMOG00000005756	-	87	79.778	ENSMODG00000006287	SMARCA4	93	80.342	Monodelphis_domestica
ENSGMOG00000005756	-	90	79.639	ENSMALG00000003388	smarca4a	90	80.756	Monopterus_albus
ENSGMOG00000005756	-	76	84.107	ENSMALG00000021534	-	86	85.390	Monopterus_albus
ENSGMOG00000005756	-	85	79.571	MGP_CAROLIEiJ_G0031879	Smarca4	92	81.990	Mus_caroli
ENSGMOG00000005756	-	85	79.571	ENSMUSG00000032187	Smarca4	92	81.990	Mus_musculus
ENSGMOG00000005756	-	85	79.571	MGP_PahariEiJ_G0014745	Smarca4	92	81.990	Mus_pahari
ENSGMOG00000005756	-	85	79.571	MGP_SPRETEiJ_G0033003	Smarca4	92	81.990	Mus_spretus
ENSGMOG00000005756	-	87	79.381	ENSMPUG00000005711	SMARCA4	92	80.601	Mustela_putorius_furo
ENSGMOG00000005756	-	87	79.553	ENSMLUG00000004491	-	92	80.773	Myotis_lucifugus
ENSGMOG00000005756	-	85	80.119	ENSNGAG00000021852	Smarca4	93	80.875	Nannospalax_galili
ENSGMOG00000005756	-	80	82.257	ENSNBRG00000011457	smarca4a	82	82.971	Neolamprologus_brichardi
ENSGMOG00000005756	-	75	84.995	ENSNBRG00000018865	-	88	85.686	Neolamprologus_brichardi
ENSGMOG00000005756	-	84	83.582	ENSNLEG00000012389	SMARCA4	90	76.971	Nomascus_leucogenys
ENSGMOG00000005756	-	68	82.759	ENSOPRG00000000885	-	67	82.759	Ochotona_princeps
ENSGMOG00000005756	-	87	80.498	ENSODEG00000017127	SMARCA4	84	80.858	Octodon_degus
ENSGMOG00000005756	-	90	80.241	ENSONIG00000008196	smarca4a	90	80.944	Oreochromis_niloticus
ENSGMOG00000005756	-	93	83.849	ENSONIG00000018040	-	93	84.635	Oreochromis_niloticus
ENSGMOG00000005756	-	85	77.690	ENSOCUG00000001787	SMARCA4	92	78.653	Oryctolagus_cuniculus
ENSGMOG00000005756	-	87	79.381	ENSORLG00000015452	smarca4a	90	81.116	Oryzias_latipes
ENSGMOG00000005756	-	90	83.605	ENSORLG00000003955	-	90	84.220	Oryzias_latipes
ENSGMOG00000005756	-	90	83.362	ENSORLG00020009728	-	90	84.147	Oryzias_latipes_hni
ENSGMOG00000005756	-	87	79.381	ENSORLG00020004611	smarca4a	90	81.116	Oryzias_latipes_hni
ENSGMOG00000005756	-	87	79.174	ENSORLG00015016560	smarca4a	88	86.521	Oryzias_latipes_hsok
ENSGMOG00000005756	-	93	83.004	ENSORLG00015007739	-	90	83.962	Oryzias_latipes_hsok
ENSGMOG00000005756	-	87	79.432	ENSOMEG00000007486	smarca4a	90	80.997	Oryzias_melastigma
ENSGMOG00000005756	-	90	83.849	ENSOMEG00000016626	-	90	84.464	Oryzias_melastigma
ENSGMOG00000005756	-	76	80.355	ENSOGAG00000016148	SMARCA4	93	80.750	Otolemur_garnettii
ENSGMOG00000005756	-	87	79.020	ENSOARG00000017454	SMARCA4	91	81.069	Ovis_aries
ENSGMOG00000005756	-	87	79.503	ENSPPAG00000043191	SMARCA4	92	80.720	Pan_paniscus
ENSGMOG00000005756	-	87	79.966	ENSPPRG00000000064	SMARCA4	93	80.667	Panthera_pardus
ENSGMOG00000005756	-	86	78.822	ENSPTIG00000017447	SMARCA4	92	79.349	Panthera_tigris_altaica
ENSGMOG00000005756	-	87	79.503	ENSPTRG00000010488	SMARCA4	92	80.720	Pan_troglodytes
ENSGMOG00000005756	-	87	79.503	ENSPANG00000011042	SMARCA4	93	79.530	Papio_anubis
ENSGMOG00000005756	-	89	82.186	ENSPKIG00000010087	-	91	82.975	Paramormyrops_kingsleyae
ENSGMOG00000005756	-	90	80.944	ENSPKIG00000007770	SMARCA4	92	82.075	Paramormyrops_kingsleyae
ENSGMOG00000005756	-	82	78.997	ENSPSIG00000005547	SMARCA4	89	79.269	Pelodiscus_sinensis
ENSGMOG00000005756	-	85	80.222	ENSPEMG00000020389	Smarca4	92	80.667	Peromyscus_maniculatus_bairdii
ENSGMOG00000005756	-	87	79.346	ENSPCIG00000017138	SMARCA4	92	80.567	Phascolarctos_cinereus
ENSGMOG00000005756	-	86	85.185	ENSPFOG00000012930	-	93	85.150	Poecilia_formosa
ENSGMOG00000005756	-	90	79.880	ENSPFOG00000007892	smarca4a	90	80.034	Poecilia_formosa
ENSGMOG00000005756	-	86	85.185	ENSPLAG00000018616	-	92	84.979	Poecilia_latipinna
ENSGMOG00000005756	-	90	79.331	ENSPLAG00000014294	smarca4a	90	80.206	Poecilia_latipinna
ENSGMOG00000005756	-	84	86.013	ENSPMEG00000008929	-	90	86.709	Poecilia_mexicana
ENSGMOG00000005756	-	87	81.448	ENSPMEG00000003725	smarca4a	88	82.023	Poecilia_mexicana
ENSGMOG00000005756	-	88	79.571	ENSPREG00000014608	smarca4a	93	80.446	Poecilia_reticulata
ENSGMOG00000005756	-	84	86.739	ENSPREG00000014823	-	90	86.709	Poecilia_reticulata
ENSGMOG00000005756	-	86	80.153	ENSPPYG00000009568	SMARCA4	93	80.786	Pongo_abelii
ENSGMOG00000005756	-	62	74.006	ENSPCAG00000014054	SMARCA4	71	74.465	Procavia_capensis
ENSGMOG00000005756	-	87	79.381	ENSPCOG00000023011	SMARCA4	92	80.601	Propithecus_coquereli
ENSGMOG00000005756	-	83	93.103	ENSPVAG00000007787	SMARCA4	88	93.103	Pteropus_vampyrus
ENSGMOG00000005756	-	80	85.662	ENSPNYG00000023995	-	84	86.089	Pundamilia_nyererei
ENSGMOG00000005756	-	87	82.561	ENSPNYG00000000717	smarca4a	88	83.092	Pundamilia_nyererei
ENSGMOG00000005756	-	84	79.229	ENSPNAG00000024136	smarca4a	85	79.260	Pygocentrus_nattereri
ENSGMOG00000005756	-	90	84.364	ENSPNAG00000006636	-	88	84.977	Pygocentrus_nattereri
ENSGMOG00000005756	-	85	79.571	ENSRNOG00000009271	Smarca4	92	80.601	Rattus_norvegicus
ENSGMOG00000005756	-	87	79.503	ENSRBIG00000038696	SMARCA4	92	80.720	Rhinopithecus_bieti
ENSGMOG00000005756	-	87	79.503	ENSRROG00000045509	SMARCA4	92	80.720	Rhinopithecus_roxellana
ENSGMOG00000005756	-	87	93.103	ENSSBOG00000026896	SMARCA4	90	93.103	Saimiri_boliviensis_boliviensis
ENSGMOG00000005756	-	87	79.604	ENSSHAG00000001642	SMARCA4	92	80.567	Sarcophilus_harrisii
ENSGMOG00000005756	-	90	81.314	ENSSFOG00015009921	-	91	82.222	Scleropages_formosus
ENSGMOG00000005756	-	90	80.532	ENSSFOG00015013823	smarca4	92	81.320	Scleropages_formosus
ENSGMOG00000005756	-	90	81.030	ENSSMAG00000003200	smarca4a	93	81.046	Scophthalmus_maximus
ENSGMOG00000005756	-	90	82.131	ENSSMAG00000014082	-	90	85.185	Scophthalmus_maximus
ENSGMOG00000005756	-	90	84.107	ENSSDUG00000005388	-	92	87.071	Seriola_dumerili
ENSGMOG00000005756	-	90	74.510	ENSSDUG00000017298	smarca4a	90	75.383	Seriola_dumerili
ENSGMOG00000005756	-	87	85.831	ENSSLDG00000023663	-	88	86.799	Seriola_lalandi_dorsalis
ENSGMOG00000005756	-	90	81.116	ENSSLDG00000024486	smarca4a	90	83.004	Seriola_lalandi_dorsalis
ENSGMOG00000005756	-	59	93.204	ENSSARG00000013477	SMARCA4	79	93.204	Sorex_araneus
ENSGMOG00000005756	-	84	81.347	ENSSPUG00000004558	SMARCA4	93	81.159	Sphenodon_punctatus
ENSGMOG00000005756	-	90	84.062	ENSSPAG00000012533	-	93	84.846	Stegastes_partitus
ENSGMOG00000005756	-	90	80.567	ENSSPAG00000004248	smarca4a	90	80.670	Stegastes_partitus
ENSGMOG00000005756	-	87	79.553	ENSSSCG00000013629	SMARCA4	92	80.687	Sus_scrofa
ENSGMOG00000005756	-	90	83.106	ENSTRUG00000001378	SMARCA4	92	83.816	Takifugu_rubripes
ENSGMOG00000005756	-	79	78.677	ENSTRUG00000004885	smarca4a	85	80.059	Takifugu_rubripes
ENSGMOG00000005756	-	93	84.138	ENSTNIG00000004536	SMARCA4	92	84.927	Tetraodon_nigroviridis
ENSGMOG00000005756	-	69	84.530	ENSTNIG00000004859	-	91	84.530	Tetraodon_nigroviridis
ENSGMOG00000005756	-	87	78.992	ENSTTRG00000009519	SMARCA4	93	79.437	Tursiops_truncatus
ENSGMOG00000005756	-	87	79.467	ENSUAMG00000014661	SMARCA4	92	80.687	Ursus_americanus
ENSGMOG00000005756	-	86	79.721	ENSUMAG00000022005	SMARCA4	92	80.379	Ursus_maritimus
ENSGMOG00000005756	-	87	79.381	ENSVVUG00000017820	SMARCA4	90	80.687	Vulpes_vulpes
ENSGMOG00000005756	-	93	80.087	ENSXETG00000009355	smarca4	89	84.545	Xenopus_tropicalis
ENSGMOG00000005756	-	79	87.104	ENSXCOG00000013494	-	86	84.093	Xiphophorus_couchianus
ENSGMOG00000005756	-	86	85.185	ENSXMAG00000007030	-	93	84.721	Xiphophorus_maculatus
ENSGMOG00000005756	-	90	79.056	ENSXMAG00000006321	smarca4a	90	79.931	Xiphophorus_maculatus