EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000005953 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: zgc:110045
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 12036 bases
Position: chrGeneScaffold_4557:198053-210088
Accession: ZDB-GENE-050706-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000006336	KH_1	PF00013.29	6.7e-51	1	3
ENSGMOP00000006336	KH_1	PF00013.29	6.7e-51	2	3
ENSGMOP00000006336	KH_1	PF00013.29	6.7e-51	3	3
ENSGMOP00000006336	KH_2	PF07650.17	4.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000006520	-	984	-	ENSGMOP00000006336	328 (aa)	-	UPI00023F1220

Gene Model

Click here to download ENSGMOG00000005953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000005953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000005953	zgc:110045	68	39.130	ENSGMOG00000011253	nova1	86	32.948
ENSGMOG00000005953	zgc:110045	97	69.325	ENSGMOG00000001342	PCBP2	92	69.325
ENSGMOG00000005953	zgc:110045	97	71.069	ENSGMOG00000009787	pcbp2	97	71.069
ENSGMOG00000005953	zgc:110045	92	34.507	ENSGMOG00000019327	igf2bp2b	61	34.507
ENSGMOG00000005953	zgc:110045	95	60.661	ENSGMOG00000017799	-	73	60.661
ENSGMOG00000005953	zgc:110045	81	32.500	ENSGMOG00000002166	khsrp	65	32.500
ENSGMOG00000005953	zgc:110045	94	53.614	ENSGMOG00000008611	-	98	53.614
ENSGMOG00000005953	zgc:110045	95	62.874	ENSGMOG00000011992	pcbp3	94	63.473
ENSGMOG00000005953	zgc:110045	77	42.857	ENSGMOG00000010184	hnrnpk	60	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000005953	zgc:110045	98	73.089	ENSG00000183570	PCBP3	98	67.409	Homo_sapiens
ENSGMOG00000005953	zgc:110045	96	91.798	ENSAPOG00000023735	zgc:110045	96	91.798	Acanthochromis_polyacanthus
ENSGMOG00000005953	zgc:110045	92	85.526	ENSACIG00000002577	zgc:110045	92	85.577	Amphilophus_citrinellus
ENSGMOG00000005953	zgc:110045	57	88.830	ENSAOCG00000005266	zgc:110045	88	88.830	Amphiprion_ocellaris
ENSGMOG00000005953	zgc:110045	93	91.205	ENSAPEG00000000729	zgc:110045	70	91.205	Amphiprion_percula
ENSGMOG00000005953	zgc:110045	70	83.913	ENSATEG00000011191	zgc:110045	65	83.913	Anabas_testudineus
ENSGMOG00000005953	zgc:110045	93	92.182	ENSACLG00000019285	zgc:110045	70	92.182	Astatotilapia_calliptera
ENSGMOG00000005953	zgc:110045	98	73.089	ENSBTAG00000030775	PCBP3	98	67.409	Bos_taurus
ENSGMOG00000005953	zgc:110045	98	69.075	ENSCAFG00000011907	PCBP3	90	69.075	Canis_familiaris
ENSGMOG00000005953	zgc:110045	98	66.571	ENSCHIG00000015841	PCBP3	88	66.571	Capra_hircus
ENSGMOG00000005953	zgc:110045	68	65.289	ENSTSYG00000005254	PCBP3	93	65.289	Carlito_syrichta
ENSGMOG00000005953	zgc:110045	98	53.936	ENSCAPG00000006767	PCBP3	82	53.936	Cavia_aperea
ENSGMOG00000005953	zgc:110045	98	68.876	ENSCPOG00000003648	PCBP3	90	68.876	Cavia_porcellus
ENSGMOG00000005953	zgc:110045	98	72.783	ENSCCAG00000024561	PCBP3	89	72.783	Cebus_capucinus
ENSGMOG00000005953	zgc:110045	98	73.089	ENSCATG00000038419	PCBP3	98	65.805	Cercocebus_atys
ENSGMOG00000005953	zgc:110045	98	68.876	ENSCLAG00000006667	PCBP3	90	68.876	Chinchilla_lanigera
ENSGMOG00000005953	zgc:110045	98	73.089	ENSCANG00000026757	PCBP3	98	65.738	Colobus_angolensis_palliatus
ENSGMOG00000005953	zgc:110045	98	68.876	ENSCGRG00001006836	Pcbp3	90	68.876	Cricetulus_griseus_chok1gshd
ENSGMOG00000005953	zgc:110045	98	68.876	ENSCGRG00000001837	Pcbp3	90	68.876	Cricetulus_griseus_crigri
ENSGMOG00000005953	zgc:110045	96	89.905	ENSCSEG00000010020	zgc:110045	96	89.905	Cynoglossus_semilaevis
ENSGMOG00000005953	zgc:110045	58	88.021	ENSCVAG00000004726	zgc:110045	86	88.021	Cyprinodon_variegatus
ENSGMOG00000005953	zgc:110045	66	78.733	ENSDARG00000057141	zgc:110045	97	78.733	Danio_rerio
ENSGMOG00000005953	zgc:110045	98	68.876	ENSDNOG00000049518	PCBP3	91	68.876	Dasypus_novemcinctus
ENSGMOG00000005953	zgc:110045	64	67.249	ENSDORG00000003640	Pcbp3	91	67.249	Dipodomys_ordii
ENSGMOG00000005953	zgc:110045	71	65.385	ENSEBUG00000009697	zgc:110045	99	65.278	Eptatretus_burgeri
ENSGMOG00000005953	zgc:110045	98	72.783	ENSEASG00005007068	PCBP3	89	72.783	Equus_asinus_asinus
ENSGMOG00000005953	zgc:110045	98	72.783	ENSECAG00000012413	PCBP3	89	72.783	Equus_caballus
ENSGMOG00000005953	zgc:110045	95	87.540	ENSELUG00000019784	zgc:110045	71	87.540	Esox_lucius
ENSGMOG00000005953	zgc:110045	98	72.783	ENSFCAG00000014812	PCBP3	89	72.783	Felis_catus
ENSGMOG00000005953	zgc:110045	98	72.783	ENSFDAG00000009117	PCBP3	89	72.783	Fukomys_damarensis
ENSGMOG00000005953	zgc:110045	94	77.910	ENSFHEG00000018838	-	88	87.500	Fundulus_heteroclitus
ENSGMOG00000005953	zgc:110045	65	89.202	ENSGAFG00000017864	zgc:110045	92	89.202	Gambusia_affinis
ENSGMOG00000005953	zgc:110045	98	91.277	ENSGACG00000003044	zgc:110045	98	91.277	Gasterosteus_aculeatus
ENSGMOG00000005953	zgc:110045	98	73.089	ENSGGOG00000003683	PCBP3	89	73.089	Gorilla_gorilla
ENSGMOG00000005953	zgc:110045	96	92.114	ENSHBUG00000012495	zgc:110045	96	92.114	Haplochromis_burtoni
ENSGMOG00000005953	zgc:110045	98	68.876	ENSHGLG00000018620	PCBP3	90	68.876	Heterocephalus_glaber_female
ENSGMOG00000005953	zgc:110045	98	68.876	ENSHGLG00100013590	PCBP3	90	68.876	Heterocephalus_glaber_male
ENSGMOG00000005953	zgc:110045	96	75.786	ENSHCOG00000000818	zgc:110045	93	85.577	Hippocampus_comes
ENSGMOG00000005953	zgc:110045	76	67.315	ENSIPUG00000003932	zgc:110045	94	67.315	Ictalurus_punctatus
ENSGMOG00000005953	zgc:110045	98	68.876	ENSSTOG00000007178	PCBP3	90	68.876	Ictidomys_tridecemlineatus
ENSGMOG00000005953	zgc:110045	98	69.164	ENSJJAG00000021192	Pcbp3	90	69.164	Jaculus_jaculus
ENSGMOG00000005953	zgc:110045	97	92.553	ENSKMAG00000016179	-	91	92.553	Kryptolebias_marmoratus
ENSGMOG00000005953	zgc:110045	96	83.234	ENSLBEG00000023074	zgc:110045	96	83.234	Labrus_bergylta
ENSGMOG00000005953	zgc:110045	98	67.147	ENSLAFG00000020835	PCBP3	100	70.238	Loxodonta_africana
ENSGMOG00000005953	zgc:110045	98	73.089	ENSMFAG00000034574	PCBP3	98	65.805	Macaca_fascicularis
ENSGMOG00000005953	zgc:110045	98	73.089	ENSMMUG00000003825	PCBP3	98	67.890	Macaca_mulatta
ENSGMOG00000005953	zgc:110045	98	73.089	ENSMNEG00000035551	PCBP3	98	73.089	Macaca_nemestrina
ENSGMOG00000005953	zgc:110045	98	73.089	ENSMLEG00000038785	PCBP3	98	65.805	Mandrillus_leucophaeus
ENSGMOG00000005953	zgc:110045	93	90.850	ENSMAMG00000014389	zgc:110045	96	90.850	Mastacembelus_armatus
ENSGMOG00000005953	zgc:110045	93	92.182	ENSMZEG00005011785	zgc:110045	70	92.182	Maylandia_zebra
ENSGMOG00000005953	zgc:110045	98	68.876	ENSMAUG00000007036	Pcbp3	90	68.876	Mesocricetus_auratus
ENSGMOG00000005953	zgc:110045	98	72.783	ENSMICG00000012679	PCBP3	89	72.783	Microcebus_murinus
ENSGMOG00000005953	zgc:110045	98	68.876	ENSMOCG00000016127	Pcbp3	90	68.876	Microtus_ochrogaster
ENSGMOG00000005953	zgc:110045	58	85.417	ENSMMOG00000008399	zgc:110045	90	85.417	Mola_mola
ENSGMOG00000005953	zgc:110045	56	85.484	ENSMALG00000008763	zgc:110045	89	85.484	Monopterus_albus
ENSGMOG00000005953	zgc:110045	98	69.075	MGP_CAROLIEiJ_G0015475	Pcbp3	97	69.957	Mus_caroli
ENSGMOG00000005953	zgc:110045	98	69.075	ENSMUSG00000001120	Pcbp3	97	69.957	Mus_musculus
ENSGMOG00000005953	zgc:110045	98	69.075	MGP_PahariEiJ_G0030889	Pcbp3	97	69.957	Mus_pahari
ENSGMOG00000005953	zgc:110045	98	69.075	MGP_SPRETEiJ_G0016288	Pcbp3	97	69.957	Mus_spretus
ENSGMOG00000005953	zgc:110045	98	68.876	ENSMLUG00000003074	PCBP3	90	68.876	Myotis_lucifugus
ENSGMOG00000005953	zgc:110045	98	68.876	ENSNGAG00000005416	Pcbp3	90	68.876	Nannospalax_galili
ENSGMOG00000005953	zgc:110045	93	92.182	ENSNBRG00000017646	zgc:110045	70	92.182	Neolamprologus_brichardi
ENSGMOG00000005953	zgc:110045	98	73.089	ENSNLEG00000002639	PCBP3	89	73.089	Nomascus_leucogenys
ENSGMOG00000005953	zgc:110045	98	64.820	ENSMEUG00000012960	PCBP3	98	64.820	Notamacropus_eugenii
ENSGMOG00000005953	zgc:110045	98	66.571	ENSODEG00000012873	PCBP3	90	66.571	Octodon_degus
ENSGMOG00000005953	zgc:110045	93	92.182	ENSONIG00000010370	zgc:110045	74	92.182	Oreochromis_niloticus
ENSGMOG00000005953	zgc:110045	72	70.588	ENSOANG00000006265	PCBP3	88	70.588	Ornithorhynchus_anatinus
ENSGMOG00000005953	zgc:110045	93	90.554	ENSORLG00000014385	-	70	90.554	Oryzias_latipes
ENSGMOG00000005953	zgc:110045	93	89.902	ENSORLG00020003139	zgc:110045	84	86.124	Oryzias_latipes_hni
ENSGMOG00000005953	zgc:110045	93	90.554	ENSOMEG00000015459	-	70	90.554	Oryzias_melastigma
ENSGMOG00000005953	zgc:110045	98	66.667	ENSOARG00000012704	PCBP3	90	66.667	Ovis_aries
ENSGMOG00000005953	zgc:110045	98	73.089	ENSPPAG00000021940	PCBP3	89	73.089	Pan_paniscus
ENSGMOG00000005953	zgc:110045	98	72.783	ENSPPRG00000003933	PCBP3	89	72.783	Panthera_pardus
ENSGMOG00000005953	zgc:110045	98	59.697	ENSPTIG00000012038	PCBP3	88	60.245	Panthera_tigris_altaica
ENSGMOG00000005953	zgc:110045	98	53.517	ENSPTRG00000014010	PCBP3	98	49.584	Pan_troglodytes
ENSGMOG00000005953	zgc:110045	98	73.089	ENSPANG00000023631	PCBP3	98	65.805	Papio_anubis
ENSGMOG00000005953	zgc:110045	65	58.019	ENSPMGG00000022531	-	93	58.019	Periophthalmus_magnuspinnatus
ENSGMOG00000005953	zgc:110045	93	76.375	ENSPMGG00000021588	-	70	76.375	Periophthalmus_magnuspinnatus
ENSGMOG00000005953	zgc:110045	98	68.876	ENSPEMG00000000587	Pcbp3	90	68.876	Peromyscus_maniculatus_bairdii
ENSGMOG00000005953	zgc:110045	96	89.873	ENSPFOG00000002348	zgc:110045	97	89.873	Poecilia_formosa
ENSGMOG00000005953	zgc:110045	65	84.977	ENSPLAG00000017488	zgc:110045	92	84.977	Poecilia_latipinna
ENSGMOG00000005953	zgc:110045	95	86.624	ENSPMEG00000012762	zgc:110045	92	89.202	Poecilia_mexicana
ENSGMOG00000005953	zgc:110045	95	90.354	ENSPREG00000001797	zgc:110045	91	90.000	Poecilia_reticulata
ENSGMOG00000005953	zgc:110045	74	65.556	ENSPPYG00000011525	-	94	65.556	Pongo_abelii
ENSGMOG00000005953	zgc:110045	94	56.609	ENSPCAG00000001454	PCBP3	99	56.609	Procavia_capensis
ENSGMOG00000005953	zgc:110045	98	72.783	ENSPCOG00000013797	PCBP3	89	72.783	Propithecus_coquereli
ENSGMOG00000005953	zgc:110045	84	70.614	ENSPVAG00000000832	PCBP3	81	70.614	Pteropus_vampyrus
ENSGMOG00000005953	zgc:110045	63	86.058	ENSPNYG00000004637	zgc:110045	92	86.058	Pundamilia_nyererei
ENSGMOG00000005953	zgc:110045	66	78.733	ENSPNAG00000004501	zgc:110045	97	78.733	Pygocentrus_nattereri
ENSGMOG00000005953	zgc:110045	98	73.089	ENSRROG00000034567	PCBP3	89	73.089	Rhinopithecus_roxellana
ENSGMOG00000005953	zgc:110045	98	73.089	ENSSBOG00000005789	PCBP3	89	73.089	Saimiri_boliviensis_boliviensis
ENSGMOG00000005953	zgc:110045	93	92.182	ENSSMAG00000013541	zgc:110045	85	91.262	Scophthalmus_maximus
ENSGMOG00000005953	zgc:110045	70	91.304	ENSSDUG00000019371	zgc:110045	66	91.304	Seriola_dumerili
ENSGMOG00000005953	zgc:110045	93	92.182	ENSSLDG00000021064	zgc:110045	70	92.182	Seriola_lalandi_dorsalis
ENSGMOG00000005953	zgc:110045	63	60.096	ENSSARG00000007629	-	100	60.096	Sorex_araneus
ENSGMOG00000005953	zgc:110045	96	92.114	ENSSPAG00000000563	zgc:110045	96	92.114	Stegastes_partitus
ENSGMOG00000005953	zgc:110045	98	72.783	ENSSSCG00000023041	PCBP3	89	72.783	Sus_scrofa
ENSGMOG00000005953	zgc:110045	56	89.247	ENSTRUG00000017789	zgc:110045	91	89.247	Takifugu_rubripes
ENSGMOG00000005953	zgc:110045	56	83.684	ENSTNIG00000003546	zgc:110045	93	83.684	Tetraodon_nigroviridis
ENSGMOG00000005953	zgc:110045	71	56.017	ENSTBEG00000011882	-	71	56.017	Tupaia_belangeri
ENSGMOG00000005953	zgc:110045	98	66.571	ENSUAMG00000006491	PCBP3	100	71.429	Ursus_americanus
ENSGMOG00000005953	zgc:110045	98	62.536	ENSUMAG00000025403	PCBP3	89	62.536	Ursus_maritimus
ENSGMOG00000005953	zgc:110045	98	64.602	ENSVVUG00000023862	PCBP3	98	62.832	Vulpes_vulpes
ENSGMOG00000005953	zgc:110045	50	89.571	ENSXCOG00000005968	zgc:110045	82	89.571	Xiphophorus_couchianus
ENSGMOG00000005953	zgc:110045	95	90.354	ENSXMAG00000008030	zgc:110045	71	90.354	Xiphophorus_maculatus