EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000006016 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 15554 bases
Position: chrGeneScaffold_672:198482-214035
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000006425	PAM2	PF07145.15	2.3e-05	1	1
ENSGMOP00000006425	LsmAD	PF06741.13	1.6e-17	1	1
ENSGMOP00000006425	SM-ATX	PF14438.6	6.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000006615	-	2820	-	ENSGMOP00000006425	939 (aa)	-	UPI00023F0C9A

Gene Model

Click here to download ENSGMOG00000006016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000006016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000006016	-	61	60.741	ENSGMOG00000000316	atxn2l	83	62.044

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000006016	-	97	43.640	ENSG00000168488	ATXN2L	100	61.458	Homo_sapiens
ENSGMOG00000006016	-	100	68.046	ENSAPOG00000021412	-	58	70.407	Acanthochromis_polyacanthus
ENSGMOG00000006016	-	98	53.187	ENSAPOG00000010103	atxn2l	99	53.823	Acanthochromis_polyacanthus
ENSGMOG00000006016	-	94	49.254	ENSACIG00000024435	atxn2l	67	69.076	Amphilophus_citrinellus
ENSGMOG00000006016	-	99	61.816	ENSAOCG00000002581	-	97	62.137	Amphiprion_ocellaris
ENSGMOG00000006016	-	100	68.142	ENSAPEG00000011038	-	60	69.692	Amphiprion_percula
ENSGMOG00000006016	-	100	67.950	ENSATEG00000019382	-	59	68.058	Anabas_testudineus
ENSGMOG00000006016	-	97	42.734	ENSANAG00000026257	ATXN2L	86	60.484	Aotus_nancymaae
ENSGMOG00000006016	-	100	66.826	ENSACLG00000009975	-	59	67.464	Astatotilapia_calliptera
ENSGMOG00000006016	-	99	59.612	ENSAMXG00000020362	-	61	58.150	Astyanax_mexicanus
ENSGMOG00000006016	-	86	65.217	ENSAMXG00000003332	atxn2l	78	65.217	Astyanax_mexicanus
ENSGMOG00000006016	-	97	42.260	ENSTSYG00000013854	ATXN2L	86	63.306	Carlito_syrichta
ENSGMOG00000006016	-	96	43.127	ENSCPOG00000010521	ATXN2L	88	63.306	Cavia_porcellus
ENSGMOG00000006016	-	97	43.972	ENSCATG00000021354	ATXN2L	86	63.710	Cercocebus_atys
ENSGMOG00000006016	-	96	43.310	ENSCLAG00000016117	ATXN2L	88	63.306	Chinchilla_lanigera
ENSGMOG00000006016	-	96	42.069	ENSCGRG00000001500	Atxn2l	88	63.306	Cricetulus_griseus_crigri
ENSGMOG00000006016	-	100	64.917	ENSCVAG00000015825	-	60	67.152	Cyprinodon_variegatus
ENSGMOG00000006016	-	70	39.857	ENSETEG00000012782	ATXN2L	59	60.748	Echinops_telfairi
ENSGMOG00000006016	-	96	44.142	ENSEASG00005014992	ATXN2L	59	39.238	Equus_asinus_asinus
ENSGMOG00000006016	-	77	43.140	ENSFDAG00000020667	ATXN2L	93	39.502	Fukomys_damarensis
ENSGMOG00000006016	-	65	62.891	ENSFHEG00000004491	-	85	61.997	Fundulus_heteroclitus
ENSGMOG00000006016	-	100	69.322	ENSGACG00000007446	-	100	68.670	Gasterosteus_aculeatus
ENSGMOG00000006016	-	97	43.756	ENSGAGG00000006078	ATXN2L	91	63.178	Gopherus_agassizii
ENSGMOG00000006016	-	95	35.306	ENSGGOG00000036669	-	53	53.462	Gorilla_gorilla
ENSGMOG00000006016	-	100	66.635	ENSHBUG00000007997	-	60	67.145	Haplochromis_burtoni
ENSGMOG00000006016	-	80	40.585	ENSSTOG00000011807	ATXN2L	87	64.557	Ictidomys_tridecemlineatus
ENSGMOG00000006016	-	96	42.956	ENSJJAG00000005629	Atxn2l	88	63.710	Jaculus_jaculus
ENSGMOG00000006016	-	100	67.871	ENSKMAG00000021450	-	96	65.619	Kryptolebias_marmoratus
ENSGMOG00000006016	-	61	70.540	ENSLBEG00000022720	-	98	67.345	Labrus_bergylta
ENSGMOG00000006016	-	97	44.048	ENSLAFG00000018143	ATXN2L	73	63.306	Loxodonta_africana
ENSGMOG00000006016	-	100	65.800	ENSMAMG00000013005	-	99	62.935	Mastacembelus_armatus
ENSGMOG00000006016	-	100	66.826	ENSMZEG00005013869	-	59	67.464	Maylandia_zebra
ENSGMOG00000006016	-	97	43.585	ENSMICG00000010608	ATXN2L	65	38.294	Microcebus_murinus
ENSGMOG00000006016	-	97	42.899	ENSMOCG00000020882	Atxn2l	88	63.306	Microtus_ochrogaster
ENSGMOG00000006016	-	94	66.203	ENSMMOG00000001440	-	61	65.068	Mola_mola
ENSGMOG00000006016	-	97	43.406	MGP_CAROLIEiJ_G0030450	Atxn2l	90	63.306	Mus_caroli
ENSGMOG00000006016	-	97	43.719	ENSMUSG00000032637	Atxn2l	88	63.306	Mus_musculus
ENSGMOG00000006016	-	96	43.260	MGP_PahariEiJ_G0013660	Atxn2l	88	63.306	Mus_pahari
ENSGMOG00000006016	-	97	43.818	MGP_SPRETEiJ_G0031564	Atxn2l	88	63.306	Mus_spretus
ENSGMOG00000006016	-	85	47.984	ENSNLEG00000033414	-	87	47.984	Nomascus_leucogenys
ENSGMOG00000006016	-	78	61.151	ENSMEUG00000011098	ATXN2L	76	63.077	Notamacropus_eugenii
ENSGMOG00000006016	-	100	66.922	ENSONIG00000011478	-	60	67.624	Oreochromis_niloticus
ENSGMOG00000006016	-	100	65.304	ENSORLG00000006059	-	89	75.000	Oryzias_latipes
ENSGMOG00000006016	-	100	65.646	ENSORLG00020000991	-	89	75.000	Oryzias_latipes_hni
ENSGMOG00000006016	-	100	64.976	ENSORLG00015014174	-	58	66.937	Oryzias_latipes_hsok
ENSGMOG00000006016	-	100	65.742	ENSOMEG00000021118	-	98	62.608	Oryzias_melastigma
ENSGMOG00000006016	-	91	42.812	ENSOARG00000002503	ATXN2L	83	64.231	Ovis_aries
ENSGMOG00000006016	-	97	42.025	ENSPPRG00000013690	ATXN2L	84	42.492	Panthera_pardus
ENSGMOG00000006016	-	97	41.939	ENSPTIG00000015041	ATXN2L	89	42.872	Panthera_tigris_altaica
ENSGMOG00000006016	-	63	56.467	ENSPKIG00000018462	-	97	52.888	Paramormyrops_kingsleyae
ENSGMOG00000006016	-	96	44.112	ENSPSIG00000004866	ATXN2L	50	41.313	Pelodiscus_sinensis
ENSGMOG00000006016	-	80	68.571	ENSPMGG00000014821	-	97	65.714	Periophthalmus_magnuspinnatus
ENSGMOG00000006016	-	100	64.990	ENSPFOG00000005935	-	60	66.504	Poecilia_formosa
ENSGMOG00000006016	-	100	65.280	ENSPLAG00000017094	-	61	67.480	Poecilia_latipinna
ENSGMOG00000006016	-	100	64.990	ENSPMEG00000017227	-	61	66.504	Poecilia_mexicana
ENSGMOG00000006016	-	100	65.767	ENSPREG00000023090	-	60	67.370	Poecilia_reticulata
ENSGMOG00000006016	-	96	43.098	ENSPCOG00000024791	ATXN2L	59	37.020	Propithecus_coquereli
ENSGMOG00000006016	-	100	66.826	ENSPNYG00000017058	-	59	67.464	Pundamilia_nyererei
ENSGMOG00000006016	-	99	57.828	ENSPNAG00000023685	-	98	57.715	Pygocentrus_nattereri
ENSGMOG00000006016	-	78	64.957	ENSRBIG00000036712	ATXN2L	83	64.831	Rhinopithecus_bieti
ENSGMOG00000006016	-	96	43.383	ENSRROG00000028547	ATXN2L	86	63.306	Rhinopithecus_roxellana
ENSGMOG00000006016	-	96	43.267	ENSSBOG00000025782	ATXN2L	86	60.484	Saimiri_boliviensis_boliviensis
ENSGMOG00000006016	-	84	49.103	ENSSMAG00000016365	atxn2l	61	42.301	Scophthalmus_maximus
ENSGMOG00000006016	-	100	68.004	ENSSDUG00000023014	-	60	69.329	Seriola_dumerili
ENSGMOG00000006016	-	83	79.310	ENSSLDG00000017701	-	97	77.395	Seriola_lalandi_dorsalis
ENSGMOG00000006016	-	100	67.560	ENSSPAG00000008174	-	59	67.943	Stegastes_partitus
ENSGMOG00000006016	-	99	67.285	ENSTRUG00000007132	-	59	68.982	Takifugu_rubripes
ENSGMOG00000006016	-	100	67.783	ENSTNIG00000018942	-	100	66.995	Tetraodon_nigroviridis
ENSGMOG00000006016	-	96	41.743	ENSUMAG00000009437	ATXN2L	93	64.231	Ursus_maritimus
ENSGMOG00000006016	-	96	42.703	ENSVVUG00000024239	ATXN2L	86	63.306	Vulpes_vulpes
ENSGMOG00000006016	-	99	40.766	ENSXETG00000014990	atxn2l	98	39.533	Xenopus_tropicalis
ENSGMOG00000006016	-	80	65.217	ENSXCOG00000001128	-	52	61.521	Xiphophorus_couchianus
ENSGMOG00000006016	-	100	64.368	ENSXMAG00000010133	-	100	62.753	Xiphophorus_maculatus