EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000006042 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 21028 bases
Position: chrGeneScaffold_1526:7555-28582
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000006440	R3H	PF01424.22	6.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000006630	-	2409	-	ENSGMOP00000006440	803 (aa)	-	UPI00023F0CC3

Gene Model

Click here to download ENSGMOG00000006042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000006042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000006042	-	51	69.141	ENSGMOG00000007961	r3hdm2	54	69.141

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000006042	-	74	65.217	ENSG00000048991	R3HDM1	72	82.609	Homo_sapiens
ENSGMOG00000006042	-	80	56.432	ENSAPOG00000020850	r3hdm1	65	63.125	Acanthochromis_polyacanthus
ENSGMOG00000006042	-	74	64.783	ENSAMEG00000014886	R3HDM1	57	64.783	Ailuropoda_melanoleuca
ENSGMOG00000006042	-	79	56.897	ENSAOCG00000005192	r3hdm1	64	63.333	Amphiprion_ocellaris
ENSGMOG00000006042	-	79	56.552	ENSAPEG00000016108	r3hdm1	66	63.579	Amphiprion_percula
ENSGMOG00000006042	-	79	56.432	ENSATEG00000000232	r3hdm1	67	63.278	Anabas_testudineus
ENSGMOG00000006042	-	81	60.338	ENSAPLG00000015231	R3HDM1	62	61.089	Anas_platyrhynchos
ENSGMOG00000006042	-	82	63.636	ENSACAG00000001676	R3HDM1	59	68.696	Anolis_carolinensis
ENSGMOG00000006042	-	74	65.000	ENSANAG00000035334	R3HDM1	60	64.783	Aotus_nancymaae
ENSGMOG00000006042	-	79	55.124	ENSACLG00000027282	r3hdm1	65	61.752	Astatotilapia_calliptera
ENSGMOG00000006042	-	82	72.264	ENSAMXG00000012861	R3HDM1	63	73.333	Astyanax_mexicanus
ENSGMOG00000006042	-	61	42.176	ENSAMXG00000020587	arpp21	56	45.395	Astyanax_mexicanus
ENSGMOG00000006042	-	82	64.815	ENSAMXG00000003536	r3hdm1	62	69.099	Astyanax_mexicanus
ENSGMOG00000006042	-	74	68.319	ENSBTAG00000013302	R3HDM1	59	69.348	Bos_taurus
ENSGMOG00000006042	-	74	65.000	ENSCJAG00000011718	R3HDM1	61	64.783	Callithrix_jacchus
ENSGMOG00000006042	-	74	64.224	ENSCAFG00000005075	R3HDM1	57	65.000	Canis_familiaris
ENSGMOG00000006042	-	74	68.534	ENSCAFG00020016119	R3HDM1	69	72.441	Canis_lupus_dingo
ENSGMOG00000006042	-	74	69.348	ENSCHIG00000020851	R3HDM1	59	69.565	Capra_hircus
ENSGMOG00000006042	-	74	68.831	ENSCPOG00000012784	R3HDM1	81	71.883	Cavia_porcellus
ENSGMOG00000006042	-	74	65.000	ENSCCAG00000027199	R3HDM1	61	64.783	Cebus_capucinus
ENSGMOG00000006042	-	74	69.783	ENSCATG00000023642	R3HDM1	59	69.130	Cercocebus_atys
ENSGMOG00000006042	-	74	68.398	ENSCLAG00000007962	R3HDM1	78	71.883	Chinchilla_lanigera
ENSGMOG00000006042	-	74	69.783	ENSCSAG00000016356	R3HDM1	59	69.130	Chlorocebus_sabaeus
ENSGMOG00000006042	-	81	64.140	ENSCPBG00000009645	R3HDM1	64	79.323	Chrysemys_picta_bellii
ENSGMOG00000006042	-	74	65.217	ENSCANG00000034748	R3HDM1	57	64.783	Colobus_angolensis_palliatus
ENSGMOG00000006042	-	74	67.174	ENSCGRG00001012357	R3hdm1	57	67.609	Cricetulus_griseus_chok1gshd
ENSGMOG00000006042	-	74	67.174	ENSCGRG00000012080	R3hdm1	78	71.353	Cricetulus_griseus_crigri
ENSGMOG00000006042	-	79	57.293	ENSCVAG00000007582	r3hdm1	67	62.288	Cyprinodon_variegatus
ENSGMOG00000006042	-	61	70.787	ENSETEG00000013606	R3HDM1	51	72.159	Echinops_telfairi
ENSGMOG00000006042	-	74	69.783	ENSEASG00005007392	R3HDM1	64	66.939	Equus_asinus_asinus
ENSGMOG00000006042	-	74	69.565	ENSECAG00000019114	R3HDM1	60	69.348	Equus_caballus
ENSGMOG00000006042	-	78	70.633	ENSELUG00000004909	R3HDM1	62	69.804	Esox_lucius
ENSGMOG00000006042	-	74	69.565	ENSFCAG00000027113	R3HDM1	59	69.348	Felis_catus
ENSGMOG00000006042	-	74	69.444	ENSFALG00000013731	R3HDM1	53	67.100	Ficedula_albicollis
ENSGMOG00000006042	-	74	68.026	ENSFDAG00000016478	R3HDM1	78	72.149	Fukomys_damarensis
ENSGMOG00000006042	-	79	57.857	ENSFHEG00000018713	r3hdm1	64	61.620	Fundulus_heteroclitus
ENSGMOG00000006042	-	52	79.026	ENSGALG00000012246	R3HDM1	52	78.740	Gallus_gallus
ENSGMOG00000006042	-	80	54.758	ENSGAFG00000006203	r3hdm1	65	58.458	Gambusia_affinis
ENSGMOG00000006042	-	82	61.331	ENSGACG00000014925	r3hdm1	72	63.762	Gasterosteus_aculeatus
ENSGMOG00000006042	-	81	63.704	ENSGAGG00000007840	R3HDM1	54	77.323	Gopherus_agassizii
ENSGMOG00000006042	-	74	65.435	ENSGGOG00000008156	R3HDM1	61	64.783	Gorilla_gorilla
ENSGMOG00000006042	-	74	68.182	ENSHGLG00000015718	R3HDM1	78	71.883	Heterocephalus_glaber_female
ENSGMOG00000006042	-	75	52.609	ENSHGLG00100015374	-	64	54.462	Heterocephalus_glaber_male
ENSGMOG00000006042	-	74	68.182	ENSHGLG00100003184	-	78	71.883	Heterocephalus_glaber_male
ENSGMOG00000006042	-	71	54.189	ENSHCOG00000013366	r3hdm1	60	75.093	Hippocampus_comes
ENSGMOG00000006042	-	79	69.303	ENSIPUG00000001676	R3HDM1	71	71.694	Ictalurus_punctatus
ENSGMOG00000006042	-	82	63.830	ENSIPUG00000013629	r3hdm1	59	80.000	Ictalurus_punctatus
ENSGMOG00000006042	-	74	68.696	ENSSTOG00000007572	R3HDM1	78	71.353	Ictidomys_tridecemlineatus
ENSGMOG00000006042	-	82	65.314	ENSLACG00000005334	R3HDM1	63	69.807	Latimeria_chalumnae
ENSGMOG00000006042	-	82	67.625	ENSLOCG00000001641	r3hdm1	62	70.539	Lepisosteus_oculatus
ENSGMOG00000006042	-	74	69.565	ENSLAFG00000009065	R3HDM1	59	69.348	Loxodonta_africana
ENSGMOG00000006042	-	74	65.217	ENSMFAG00000030331	R3HDM1	61	64.565	Macaca_fascicularis
ENSGMOG00000006042	-	74	65.000	ENSMMUG00000009844	R3HDM1	61	64.348	Macaca_mulatta
ENSGMOG00000006042	-	74	65.217	ENSMNEG00000027793	R3HDM1	61	64.565	Macaca_nemestrina
ENSGMOG00000006042	-	74	65.217	ENSMLEG00000043189	R3HDM1	61	64.565	Mandrillus_leucophaeus
ENSGMOG00000006042	-	79	56.775	ENSMAMG00000004532	r3hdm1	67	63.848	Mastacembelus_armatus
ENSGMOG00000006042	-	79	56.771	ENSMZEG00005003157	r3hdm1	67	63.808	Maylandia_zebra
ENSGMOG00000006042	-	81	59.774	ENSMGAG00000012461	R3HDM1	61	60.484	Meleagris_gallopavo
ENSGMOG00000006042	-	74	67.174	ENSMAUG00000010315	R3hdm1	78	71.618	Mesocricetus_auratus
ENSGMOG00000006042	-	51	80.524	ENSMICG00000042655	-	52	80.451	Microcebus_murinus
ENSGMOG00000006042	-	74	64.348	ENSMICG00000005900	-	60	64.348	Microcebus_murinus
ENSGMOG00000006042	-	73	69.197	ENSMODG00000000923	R3HDM1	60	65.644	Monodelphis_domestica
ENSGMOG00000006042	-	74	67.174	MGP_CAROLIEiJ_G0014543	R3hdm1	78	71.353	Mus_caroli
ENSGMOG00000006042	-	74	67.174	ENSMUSG00000056211	R3hdm1	78	71.353	Mus_musculus
ENSGMOG00000006042	-	74	67.245	MGP_PahariEiJ_G0027779	R3hdm1	78	71.353	Mus_pahari
ENSGMOG00000006042	-	74	67.174	MGP_SPRETEiJ_G0015350	R3hdm1	78	71.353	Mus_spretus
ENSGMOG00000006042	-	74	64.783	ENSMPUG00000002412	R3HDM1	57	64.783	Mustela_putorius_furo
ENSGMOG00000006042	-	74	64.130	ENSMLUG00000013824	R3HDM1	57	64.130	Myotis_lucifugus
ENSGMOG00000006042	-	74	65.000	ENSNLEG00000008622	R3HDM1	61	64.565	Nomascus_leucogenys
ENSGMOG00000006042	-	70	53.440	ENSMEUG00000011784	R3HDM1	61	50.216	Notamacropus_eugenii
ENSGMOG00000006042	-	74	68.615	ENSODEG00000008607	R3HDM1	76	73.025	Octodon_degus
ENSGMOG00000006042	-	74	64.286	ENSOANG00000007987	R3HDM1	60	61.443	Ornithorhynchus_anatinus
ENSGMOG00000006042	-	73	63.261	ENSOCUG00000017366	R3HDM1	62	63.261	Oryctolagus_cuniculus
ENSGMOG00000006042	-	79	55.773	ENSORLG00000004297	r3hdm1	62	68.848	Oryzias_latipes
ENSGMOG00000006042	-	80	55.398	ENSORLG00015017355	r3hdm1	62	68.848	Oryzias_latipes_hsok
ENSGMOG00000006042	-	74	64.783	ENSOGAG00000003136	R3HDM1	58	64.783	Otolemur_garnettii
ENSGMOG00000006042	-	74	64.783	ENSOARG00000010788	R3HDM1	58	65.000	Ovis_aries
ENSGMOG00000006042	-	74	65.217	ENSPPAG00000027858	R3HDM1	60	64.783	Pan_paniscus
ENSGMOG00000006042	-	74	64.783	ENSPPRG00000002626	R3HDM1	61	64.565	Panthera_pardus
ENSGMOG00000006042	-	74	64.783	ENSPTIG00000016581	R3HDM1	61	64.783	Panthera_tigris_altaica
ENSGMOG00000006042	-	74	65.217	ENSPTRG00000012494	R3HDM1	60	64.783	Pan_troglodytes
ENSGMOG00000006042	-	74	65.217	ENSPANG00000026448	R3HDM1	61	64.565	Papio_anubis
ENSGMOG00000006042	-	77	70.103	ENSPKIG00000004328	r3hdm1	58	85.057	Paramormyrops_kingsleyae
ENSGMOG00000006042	-	81	61.670	ENSPSIG00000012915	R3HDM1	58	65.714	Pelodiscus_sinensis
ENSGMOG00000006042	-	74	67.245	ENSPEMG00000015187	R3hdm1	78	71.088	Peromyscus_maniculatus_bairdii
ENSGMOG00000006042	-	74	69.330	ENSPCIG00000002491	R3HDM1	64	65.440	Phascolarctos_cinereus
ENSGMOG00000006042	-	79	57.726	ENSPFOG00000015036	r3hdm1	65	62.658	Poecilia_formosa
ENSGMOG00000006042	-	79	54.937	ENSPLAG00000018042	r3hdm1	65	59.871	Poecilia_latipinna
ENSGMOG00000006042	-	79	54.955	ENSPMEG00000023947	r3hdm1	65	59.871	Poecilia_mexicana
ENSGMOG00000006042	-	79	57.345	ENSPREG00000007902	r3hdm1	81	65.891	Poecilia_reticulata
ENSGMOG00000006042	-	74	62.907	ENSPPYG00000012815	R3HDM1	57	62.473	Pongo_abelii
ENSGMOG00000006042	-	74	64.348	ENSPCOG00000012698	R3HDM1	50	80.827	Propithecus_coquereli
ENSGMOG00000006042	-	66	61.982	ENSPVAG00000006098	R3HDM1	51	61.982	Pteropus_vampyrus
ENSGMOG00000006042	-	52	87.259	ENSPNAG00000005436	R3HDM1	53	87.209	Pygocentrus_nattereri
ENSGMOG00000006042	-	61	43.212	ENSPNAG00000004162	arpp21	63	57.258	Pygocentrus_nattereri
ENSGMOG00000006042	-	79	66.008	ENSPNAG00000013952	r3hdm1	58	84.615	Pygocentrus_nattereri
ENSGMOG00000006042	-	74	66.957	ENSRNOG00000004099	R3hdm1	59	67.391	Rattus_norvegicus
ENSGMOG00000006042	-	74	63.913	ENSRBIG00000033317	R3HDM1	54	81.579	Rhinopithecus_bieti
ENSGMOG00000006042	-	74	63.913	ENSRROG00000034534	R3HDM1	60	64.565	Rhinopithecus_roxellana
ENSGMOG00000006042	-	74	64.783	ENSSBOG00000020389	R3HDM1	61	64.565	Saimiri_boliviensis_boliviensis
ENSGMOG00000006042	-	74	64.795	ENSSHAG00000016999	R3HDM1	63	61.145	Sarcophilus_harrisii
ENSGMOG00000006042	-	81	65.065	ENSSFOG00015019851	-	70	67.681	Scleropages_formosus
ENSGMOG00000006042	-	81	70.690	ENSSFOG00015014134	r3hdm1	65	72.784	Scleropages_formosus
ENSGMOG00000006042	-	75	60.907	ENSSMAG00000001669	r3hdm1	59	60.954	Scophthalmus_maximus
ENSGMOG00000006042	-	79	54.181	ENSSDUG00000010749	r3hdm1	64	60.297	Seriola_dumerili
ENSGMOG00000006042	-	81	54.355	ENSSLDG00000004499	r3hdm1	58	60.510	Seriola_lalandi_dorsalis
ENSGMOG00000006042	-	82	59.590	ENSSPUG00000004167	R3HDM1	58	63.991	Sphenodon_punctatus
ENSGMOG00000006042	-	79	54.799	ENSSPAG00000004648	r3hdm1	65	62.017	Stegastes_partitus
ENSGMOG00000006042	-	74	67.888	ENSSSCG00000015692	R3HDM1	50	64.348	Sus_scrofa
ENSGMOG00000006042	-	74	64.286	ENSTGUG00000011750	R3HDM1	58	62.446	Taeniopygia_guttata
ENSGMOG00000006042	-	79	55.052	ENSTRUG00000011654	r3hdm1	65	61.099	Takifugu_rubripes
ENSGMOG00000006042	-	80	54.083	ENSTNIG00000010362	r3hdm1	66	58.686	Tetraodon_nigroviridis
ENSGMOG00000006042	-	74	63.913	ENSTTRG00000003935	R3HDM1	58	63.261	Tursiops_truncatus
ENSGMOG00000006042	-	61	59.393	ENSUAMG00000024806	R3HDM1	68	71.925	Ursus_americanus
ENSGMOG00000006042	-	74	64.348	ENSUMAG00000005552	R3HDM1	50	80.827	Ursus_maritimus
ENSGMOG00000006042	-	74	68.750	ENSVVUG00000006457	R3HDM1	61	69.565	Vulpes_vulpes
ENSGMOG00000006042	-	79	58.052	ENSXETG00000019330	r3hdm1	66	60.649	Xenopus_tropicalis
ENSGMOG00000006042	-	61	53.025	ENSXCOG00000017448	r3hdm1	55	58.723	Xiphophorus_couchianus
ENSGMOG00000006042	-	79	55.088	ENSXMAG00000007885	r3hdm1	65	62.105	Xiphophorus_maculatus