EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000006103 (Gene tree)
Gene ID: -
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt-like transcription factor 1a
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 11136 bases
Position: chrGeneScaffold_3435:836427-847562
Accession: ZDB-GENE-020228-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000006464	zf-C2H2	PF00096.26	2e-34	1	6
ENSGMOP00000006464	zf-C2H2	PF00096.26	2e-34	2	6
ENSGMOP00000006464	zf-C2H2	PF00096.26	2e-34	3	6
ENSGMOP00000006464	zf-C2H2	PF00096.26	2e-34	4	6
ENSGMOP00000006464	zf-C2H2	PF00096.26	2e-34	5	6
ENSGMOP00000006464	zf-C2H2	PF00096.26	2e-34	6	6
ENSGMOP00000006464	zf-met	PF12874.7	2.4e-25	1	5
ENSGMOP00000006464	zf-met	PF12874.7	2.4e-25	2	5
ENSGMOP00000006464	zf-met	PF12874.7	2.4e-25	3	5
ENSGMOP00000006464	zf-met	PF12874.7	2.4e-25	4	5
ENSGMOP00000006464	zf-met	PF12874.7	2.4e-25	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000006655	-	3924	-	ENSGMOP00000006464	1307 (aa)	-	UPI00023F0DE0

Gene Model

Click here to download ENSGMOG00000006103's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000006103's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000006103	sall1a	67	50.980	ENSGMOG00000006668	znf236	79	50.980
ENSGMOG00000006103	sall1a	97	40.595	ENSGMOG00000013383	-	99	41.463
ENSGMOG00000006103	sall1a	66	63.679	ENSGMOG00000006649	sall3a	70	63.462
ENSGMOG00000006103	sall1a	80	59.615	ENSGMOG00000003822	sall4	100	55.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000006103	sall1a	99	65.896	ENSG00000103449	SALL1	100	66.155	Homo_sapiens
ENSGMOG00000006103	sall1a	100	84.756	ENSAPOG00000022764	sall1a	100	84.756	Acanthochromis_polyacanthus
ENSGMOG00000006103	sall1a	99	66.217	ENSAMEG00000006817	SALL1	100	66.369	Ailuropoda_melanoleuca
ENSGMOG00000006103	sall1a	100	83.918	ENSACIG00000004231	sall1a	100	83.918	Amphilophus_citrinellus
ENSGMOG00000006103	sall1a	100	84.756	ENSAOCG00000002800	sall1a	100	84.756	Amphiprion_ocellaris
ENSGMOG00000006103	sall1a	100	84.527	ENSAPEG00000010179	sall1a	100	84.527	Amphiprion_percula
ENSGMOG00000006103	sall1a	99	84.516	ENSATEG00000003006	sall1a	99	84.516	Anabas_testudineus
ENSGMOG00000006103	sall1a	100	67.892	ENSAPLG00000003356	SALL1	100	68.066	Anas_platyrhynchos
ENSGMOG00000006103	sall1a	99	66.213	ENSACAG00000014399	SALL1	97	66.138	Anolis_carolinensis
ENSGMOG00000006103	sall1a	99	66.442	ENSANAG00000027238	SALL1	99	66.766	Aotus_nancymaae
ENSGMOG00000006103	sall1a	100	83.918	ENSACLG00000017148	sall1a	100	83.918	Astatotilapia_calliptera
ENSGMOG00000006103	sall1a	100	77.559	ENSAMXG00000018599	sall1a	100	77.710	Astyanax_mexicanus
ENSGMOG00000006103	sall1a	99	51.109	ENSAMXG00000017702	sall1b	99	50.988	Astyanax_mexicanus
ENSGMOG00000006103	sall1a	99	65.896	ENSBTAG00000008544	SALL1	100	66.145	Bos_taurus
ENSGMOG00000006103	sall1a	99	66.343	ENSCJAG00000001740	SALL1	99	66.965	Callithrix_jacchus
ENSGMOG00000006103	sall1a	99	66.070	ENSCAFG00000009755	SALL1	100	66.741	Canis_familiaris
ENSGMOG00000006103	sall1a	99	66.070	ENSCAFG00020002842	SALL1	100	66.741	Canis_lupus_dingo
ENSGMOG00000006103	sall1a	100	65.972	ENSCHIG00000026074	SALL1	100	65.803	Capra_hircus
ENSGMOG00000006103	sall1a	99	67.312	ENSTSYG00000029464	SALL1	99	67.312	Carlito_syrichta
ENSGMOG00000006103	sall1a	98	66.769	ENSCPOG00000006564	SALL1	99	66.743	Cavia_porcellus
ENSGMOG00000006103	sall1a	99	64.569	ENSCCAG00000001639	SALL1	100	64.653	Cebus_capucinus
ENSGMOG00000006103	sall1a	99	66.442	ENSCATG00000004982	SALL1	100	66.617	Cercocebus_atys
ENSGMOG00000006103	sall1a	99	66.741	ENSCLAG00000006380	SALL1	100	66.667	Chinchilla_lanigera
ENSGMOG00000006103	sall1a	99	65.894	ENSCSAG00000005319	SALL1	100	66.045	Chlorocebus_sabaeus
ENSGMOG00000006103	sall1a	63	66.406	ENSCHOG00000000800	-	69	66.406	Choloepus_hoffmanni
ENSGMOG00000006103	sall1a	100	67.416	ENSCPBG00000015924	SALL1	100	67.665	Chrysemys_picta_bellii
ENSGMOG00000006103	sall1a	99	65.918	ENSCANG00000036664	SALL1	100	66.766	Colobus_angolensis_palliatus
ENSGMOG00000006103	sall1a	99	65.230	ENSCGRG00001023314	-	100	65.230	Cricetulus_griseus_chok1gshd
ENSGMOG00000006103	sall1a	98	65.152	ENSCGRG00000009496	Sall1	100	65.152	Cricetulus_griseus_crigri
ENSGMOG00000006103	sall1a	99	82.814	ENSCSEG00000009349	sall1a	99	82.814	Cynoglossus_semilaevis
ENSGMOG00000006103	sall1a	90	82.277	ENSCVAG00000020513	sall1a	99	82.277	Cyprinodon_variegatus
ENSGMOG00000006103	sall1a	99	46.833	ENSDARG00000075891	sall1b	99	46.281	Danio_rerio
ENSGMOG00000006103	sall1a	100	76.911	ENSDARG00000074319	sall1a	100	77.061	Danio_rerio
ENSGMOG00000006103	sall1a	99	66.393	ENSDNOG00000016413	SALL1	100	66.343	Dasypus_novemcinctus
ENSGMOG00000006103	sall1a	98	65.651	ENSETEG00000015150	SALL1	99	65.802	Echinops_telfairi
ENSGMOG00000006103	sall1a	60	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSGMOG00000006103	sall1a	99	66.392	ENSEASG00005014602	SALL1	100	66.791	Equus_asinus_asinus
ENSGMOG00000006103	sall1a	91	64.386	ENSECAG00000011334	SALL1	99	64.798	Equus_caballus
ENSGMOG00000006103	sall1a	98	66.793	ENSEEUG00000002014	SALL1	100	66.667	Erinaceus_europaeus
ENSGMOG00000006103	sall1a	100	76.851	ENSELUG00000006159	sall1a	100	76.923	Esox_lucius
ENSGMOG00000006103	sall1a	100	53.858	ENSELUG00000017774	-	100	54.633	Esox_lucius
ENSGMOG00000006103	sall1a	99	64.955	ENSFCAG00000024654	SALL1	100	66.290	Felis_catus
ENSGMOG00000006103	sall1a	100	67.667	ENSFALG00000000074	SALL1	100	67.742	Ficedula_albicollis
ENSGMOG00000006103	sall1a	100	83.384	ENSFHEG00000012579	sall1a	100	83.384	Fundulus_heteroclitus
ENSGMOG00000006103	sall1a	74	63.415	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSGMOG00000006103	sall1a	100	67.967	ENSGALG00000039238	SALL1	100	68.042	Gallus_gallus
ENSGMOG00000006103	sall1a	100	83.638	ENSGAFG00000009964	sall1a	100	83.638	Gambusia_affinis
ENSGMOG00000006103	sall1a	99	83.206	ENSGACG00000016702	sall1a	99	83.206	Gasterosteus_aculeatus
ENSGMOG00000006103	sall1a	100	67.616	ENSGAGG00000013979	SALL1	100	67.790	Gopherus_agassizii
ENSGMOG00000006103	sall1a	99	65.970	ENSGGOG00000000663	SALL1	100	66.418	Gorilla_gorilla
ENSGMOG00000006103	sall1a	100	83.918	ENSHBUG00000022005	sall1a	100	83.918	Haplochromis_burtoni
ENSGMOG00000006103	sall1a	99	66.442	ENSHGLG00000004288	-	100	66.966	Heterocephalus_glaber_female
ENSGMOG00000006103	sall1a	99	66.442	ENSHGLG00100017496	SALL1	100	66.966	Heterocephalus_glaber_male
ENSGMOG00000006103	sall1a	100	79.186	ENSHCOG00000000974	sall1a	100	78.959	Hippocampus_comes
ENSGMOG00000006103	sall1a	100	77.180	ENSIPUG00000016265	SALL1	100	77.180	Ictalurus_punctatus
ENSGMOG00000006103	sall1a	99	50.113	ENSIPUG00000022928	sall1b	99	50.264	Ictalurus_punctatus
ENSGMOG00000006103	sall1a	99	66.295	ENSSTOG00000020885	SALL1	100	66.841	Ictidomys_tridecemlineatus
ENSGMOG00000006103	sall1a	100	83.841	ENSKMAG00000016681	sall1a	100	83.841	Kryptolebias_marmoratus
ENSGMOG00000006103	sall1a	98	82.761	ENSLBEG00000012207	sall1a	95	82.761	Labrus_bergylta
ENSGMOG00000006103	sall1a	59	40.127	ENSLACG00000014018	-	93	38.462	Latimeria_chalumnae
ENSGMOG00000006103	sall1a	100	66.792	ENSLACG00000003556	SALL1	100	67.092	Latimeria_chalumnae
ENSGMOG00000006103	sall1a	100	88.000	ENSLOCG00000007283	sall1b	94	88.000	Lepisosteus_oculatus
ENSGMOG00000006103	sall1a	98	65.682	ENSLAFG00000015251	SALL1	99	65.585	Loxodonta_africana
ENSGMOG00000006103	sall1a	99	66.094	ENSMFAG00000003298	SALL1	100	66.567	Macaca_fascicularis
ENSGMOG00000006103	sall1a	93	65.700	ENSMMUG00000017200	SALL1	100	66.211	Macaca_mulatta
ENSGMOG00000006103	sall1a	93	66.050	ENSMNEG00000034770	SALL1	100	66.077	Macaca_nemestrina
ENSGMOG00000006103	sall1a	99	66.067	ENSMLEG00000036406	SALL1	100	66.766	Mandrillus_leucophaeus
ENSGMOG00000006103	sall1a	99	85.518	ENSMAMG00000004164	sall1a	99	85.518	Mastacembelus_armatus
ENSGMOG00000006103	sall1a	100	83.841	ENSMZEG00005006479	sall1a	100	83.841	Maylandia_zebra
ENSGMOG00000006103	sall1a	98	67.813	ENSMGAG00000004704	SALL1	100	67.890	Meleagris_gallopavo
ENSGMOG00000006103	sall1a	99	64.873	ENSMAUG00000019093	Sall1	100	65.292	Mesocricetus_auratus
ENSGMOG00000006103	sall1a	100	66.492	ENSMICG00000036486	SALL1	100	66.642	Microcebus_murinus
ENSGMOG00000006103	sall1a	99	83.066	ENSMMOG00000016400	sall1a	99	83.066	Mola_mola
ENSGMOG00000006103	sall1a	99	66.392	ENSMODG00000013114	SALL1	99	66.392	Monodelphis_domestica
ENSGMOG00000006103	sall1a	99	85.431	ENSMALG00000013400	sall1a	99	85.431	Monopterus_albus
ENSGMOG00000006103	sall1a	99	65.425	MGP_CAROLIEiJ_G0031362	Sall1	100	65.382	Mus_caroli
ENSGMOG00000006103	sall1a	99	64.933	ENSMUSG00000031665	Sall1	100	64.853	Mus_musculus
ENSGMOG00000006103	sall1a	99	64.833	MGP_PahariEiJ_G0022961	Sall1	100	64.915	Mus_pahari
ENSGMOG00000006103	sall1a	99	65.130	MGP_SPRETEiJ_G0032480	Sall1	100	65.048	Mus_spretus
ENSGMOG00000006103	sall1a	99	65.658	ENSMPUG00000003265	SALL1	96	65.431	Mustela_putorius_furo
ENSGMOG00000006103	sall1a	97	64.400	ENSMLUG00000015541	SALL1	100	63.985	Myotis_lucifugus
ENSGMOG00000006103	sall1a	100	84.070	ENSNBRG00000009307	sall1a	100	84.070	Neolamprologus_brichardi
ENSGMOG00000006103	sall1a	93	78.212	ENSNLEG00000001008	SALL1	99	78.212	Nomascus_leucogenys
ENSGMOG00000006103	sall1a	99	66.467	ENSMEUG00000012206	SALL1	99	66.392	Notamacropus_eugenii
ENSGMOG00000006103	sall1a	85	69.795	ENSOPRG00000005645	SALL1	71	69.591	Ochotona_princeps
ENSGMOG00000006103	sall1a	99	66.592	ENSODEG00000003685	SALL1	100	66.543	Octodon_degus
ENSGMOG00000006103	sall1a	100	83.918	ENSONIG00000002831	sall1a	100	83.918	Oreochromis_niloticus
ENSGMOG00000006103	sall1a	87	75.510	ENSOANG00000013399	SALL1	99	80.729	Ornithorhynchus_anatinus
ENSGMOG00000006103	sall1a	100	82.470	ENSORLG00000013827	sall1a	100	82.843	Oryzias_latipes
ENSGMOG00000006103	sall1a	100	82.317	ENSORLG00020020570	sall1a	100	82.317	Oryzias_latipes_hni
ENSGMOG00000006103	sall1a	100	82.393	ENSORLG00015018830	sall1a	100	82.843	Oryzias_latipes_hsok
ENSGMOG00000006103	sall1a	100	82.317	ENSOMEG00000016043	sall1a	100	82.317	Oryzias_melastigma
ENSGMOG00000006103	sall1a	99	66.991	ENSOGAG00000027316	SALL1	100	66.941	Otolemur_garnettii
ENSGMOG00000006103	sall1a	100	61.584	ENSOARG00000017583	SALL1	100	61.767	Ovis_aries
ENSGMOG00000006103	sall1a	97	49.268	ENSPPAG00000035136	-	98	50.116	Pan_paniscus
ENSGMOG00000006103	sall1a	98	65.906	ENSPPAG00000035657	SALL1	99	66.590	Pan_paniscus
ENSGMOG00000006103	sall1a	100	64.758	ENSPPRG00000023283	SALL1	100	66.129	Panthera_pardus
ENSGMOG00000006103	sall1a	81	80.571	ENSPTIG00000013539	-	94	70.037	Panthera_tigris_altaica
ENSGMOG00000006103	sall1a	99	66.170	ENSPTRG00000008108	SALL1	100	66.493	Pan_troglodytes
ENSGMOG00000006103	sall1a	96	49.412	ENSPTRG00000045256	-	97	50.275	Pan_troglodytes
ENSGMOG00000006103	sall1a	99	65.993	ENSPANG00000024176	SALL1	100	66.692	Papio_anubis
ENSGMOG00000006103	sall1a	100	68.461	ENSPKIG00000005383	-	100	68.608	Paramormyrops_kingsleyae
ENSGMOG00000006103	sall1a	100	70.997	ENSPKIG00000022251	sall1a	100	71.073	Paramormyrops_kingsleyae
ENSGMOG00000006103	sall1a	100	67.967	ENSPSIG00000008582	SALL1	100	68.042	Pelodiscus_sinensis
ENSGMOG00000006103	sall1a	99	77.937	ENSPMGG00000021788	sall1a	99	77.937	Periophthalmus_magnuspinnatus
ENSGMOG00000006103	sall1a	99	66.542	ENSPCIG00000017840	SALL1	99	66.467	Phascolarctos_cinereus
ENSGMOG00000006103	sall1a	98	83.282	ENSPFOG00000015799	sall1a	96	83.282	Poecilia_formosa
ENSGMOG00000006103	sall1a	100	83.562	ENSPLAG00000022539	sall1a	100	83.562	Poecilia_latipinna
ENSGMOG00000006103	sall1a	100	83.714	ENSPMEG00000020894	sall1a	100	83.714	Poecilia_mexicana
ENSGMOG00000006103	sall1a	100	83.486	ENSPREG00000006802	sall1a	100	83.486	Poecilia_reticulata
ENSGMOG00000006103	sall1a	90	65.021	ENSPPYG00000007345	SALL1	96	65.359	Pongo_abelii
ENSGMOG00000006103	sall1a	85	70.370	ENSPCAG00000008162	SALL1	93	70.370	Procavia_capensis
ENSGMOG00000006103	sall1a	99	66.093	ENSPCOG00000028192	SALL1	100	66.493	Propithecus_coquereli
ENSGMOG00000006103	sall1a	66	67.931	ENSPVAG00000015374	SALL1	100	67.931	Pteropus_vampyrus
ENSGMOG00000006103	sall1a	100	83.994	ENSPNYG00000010865	sall1a	100	83.994	Pundamilia_nyererei
ENSGMOG00000006103	sall1a	99	52.888	ENSPNAG00000007442	sall1b	99	53.193	Pygocentrus_nattereri
ENSGMOG00000006103	sall1a	100	76.061	ENSPNAG00000023644	sall1a	100	76.212	Pygocentrus_nattereri
ENSGMOG00000006103	sall1a	69	65.306	ENSPNAG00000028248	-	72	65.306	Pygocentrus_nattereri
ENSGMOG00000006103	sall1a	99	64.824	ENSRNOG00000013907	Sall1	100	65.030	Rattus_norvegicus
ENSGMOG00000006103	sall1a	93	66.129	ENSRBIG00000015707	SALL1	100	66.425	Rhinopithecus_bieti
ENSGMOG00000006103	sall1a	97	66.359	ENSRROG00000035777	SALL1	100	66.372	Rhinopithecus_roxellana
ENSGMOG00000006103	sall1a	99	66.169	ENSSBOG00000032186	SALL1	99	66.866	Saimiri_boliviensis_boliviensis
ENSGMOG00000006103	sall1a	99	65.866	ENSSHAG00000009477	SALL1	99	65.866	Sarcophilus_harrisii
ENSGMOG00000006103	sall1a	98	69.572	ENSSFOG00015001590	sall1a	99	70.092	Scleropages_formosus
ENSGMOG00000006103	sall1a	100	71.623	ENSSFOG00015020020	sall1a	100	71.611	Scleropages_formosus
ENSGMOG00000006103	sall1a	99	85.050	ENSSMAG00000009160	sall1a	99	85.050	Scophthalmus_maximus
ENSGMOG00000006103	sall1a	99	85.736	ENSSDUG00000006507	sall1a	99	85.736	Seriola_dumerili
ENSGMOG00000006103	sall1a	76	59.799	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSGMOG00000006103	sall1a	99	85.671	ENSSLDG00000017721	sall1a	99	85.671	Seriola_lalandi_dorsalis
ENSGMOG00000006103	sall1a	98	65.906	ENSSARG00000000661	SALL1	100	65.732	Sorex_araneus
ENSGMOG00000006103	sall1a	100	67.442	ENSSPUG00000000156	SALL1	100	67.616	Sphenodon_punctatus
ENSGMOG00000006103	sall1a	100	84.768	ENSSPAG00000021615	sall1a	100	84.768	Stegastes_partitus
ENSGMOG00000006103	sall1a	99	65.599	ENSSSCG00000002836	SALL1	100	65.850	Sus_scrofa
ENSGMOG00000006103	sall1a	100	67.517	ENSTGUG00000007514	SALL1	100	67.592	Taeniopygia_guttata
ENSGMOG00000006103	sall1a	91	80.833	ENSTRUG00000008950	sall1a	100	80.833	Takifugu_rubripes
ENSGMOG00000006103	sall1a	92	79.253	ENSTNIG00000004257	sall1a	100	79.419	Tetraodon_nigroviridis
ENSGMOG00000006103	sall1a	72	74.658	ENSTBEG00000002119	-	53	74.658	Tupaia_belangeri
ENSGMOG00000006103	sall1a	90	65.688	ENSUAMG00000023379	-	92	66.080	Ursus_americanus
ENSGMOG00000006103	sall1a	90	64.804	ENSVVUG00000019383	-	99	65.807	Vulpes_vulpes
ENSGMOG00000006103	sall1a	100	63.416	ENSXETG00000018417	sall1	100	63.350	Xenopus_tropicalis
ENSGMOG00000006103	sall1a	97	34.786	ENSXETG00000017176	sall2	99	34.404	Xenopus_tropicalis
ENSGMOG00000006103	sall1a	100	83.486	ENSXMAG00000016273	sall1a	100	83.486	Xiphophorus_maculatus