EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000006105 (Gene tree)
Gene ID: -
Gene Symbol: srsf6a (1 of many)
Alias: -
Full Name: serine/arginine-rich splicing factor 6a
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 3291 bases
Position: chrGeneScaffold_1302:147574-150864
Accession: ZDB-GENE-040426-2824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000006468	RRM_1	PF00076.22	1.7e-30	1	2
ENSGMOP00000006468	RRM_1	PF00076.22	1.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000006659	-	807	-	ENSGMOP00000006468	269 (aa)	-	UPI00023F0DE2

Gene Model

Click here to download ENSGMOG00000006105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000006105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000006105	srsf6a	57	48.428	ENSGMOG00000014787	-	66	48.428
ENSGMOG00000006105	srsf6a	61	30.435	ENSGMOG00000009633	rbm14b	64	30.435
ENSGMOG00000006105	srsf6a	57	48.750	ENSGMOG00000010606	-	84	49.375
ENSGMOG00000006105	srsf6a	62	70.787	ENSGMOG00000014458	srsf6a	51	68.449
ENSGMOG00000006105	srsf6a	57	43.976	ENSGMOG00000007980	srsf9	65	44.970
ENSGMOG00000006105	srsf6a	61	64.118	ENSGMOG00000000869	srsf5a	90	64.118
ENSGMOG00000006105	srsf6a	63	48.649	ENSGMOG00000000595	srsf5b	95	50.230
ENSGMOG00000006105	srsf6a	62	64.773	ENSGMOG00000012906	srsf4	55	66.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000006105	srsf6a	62	70.391	ENSG00000124193	SRSF6	61	76.829	Homo_sapiens
ENSGMOG00000006105	srsf6a	62	58.889	ENSAMEG00000003710	SRSF6	71	52.439	Ailuropoda_melanoleuca
ENSGMOG00000006105	srsf6a	61	73.143	ENSACIG00000023658	-	55	74.857	Amphilophus_citrinellus
ENSGMOG00000006105	srsf6a	94	56.338	ENSACIG00000020091	-	95	70.866	Amphilophus_citrinellus
ENSGMOG00000006105	srsf6a	62	73.143	ENSAOCG00000004309	-	55	73.143	Amphiprion_ocellaris
ENSGMOG00000006105	srsf6a	62	74.033	ENSAPEG00000013086	-	52	75.138	Amphiprion_percula
ENSGMOG00000006105	srsf6a	62	69.444	ENSAPEG00000020746	-	64	69.444	Amphiprion_percula
ENSGMOG00000006105	srsf6a	91	57.752	ENSATEG00000007255	-	81	66.351	Anabas_testudineus
ENSGMOG00000006105	srsf6a	88	54.472	ENSACAG00000002061	SRSF6	64	65.179	Anolis_carolinensis
ENSGMOG00000006105	srsf6a	62	70.391	ENSANAG00000024080	SRSF6	61	76.829	Aotus_nancymaae
ENSGMOG00000006105	srsf6a	62	69.780	ENSAMXG00000042692	-	96	69.630	Astyanax_mexicanus
ENSGMOG00000006105	srsf6a	62	70.950	ENSBTAG00000008527	SRSF6	61	78.049	Bos_taurus
ENSGMOG00000006105	srsf6a	62	70.950	ENSCAFG00000009289	SRSF6	61	78.049	Canis_familiaris
ENSGMOG00000006105	srsf6a	62	70.950	ENSCAFG00020013559	SRSF6	61	78.049	Canis_lupus_dingo
ENSGMOG00000006105	srsf6a	62	56.471	ENSTSYG00000026476	SRSF6	66	49.576	Carlito_syrichta
ENSGMOG00000006105	srsf6a	57	70.909	ENSCPOG00000011761	SRSF6	61	76.829	Cavia_porcellus
ENSGMOG00000006105	srsf6a	62	61.667	ENSCCAG00000018540	-	59	61.667	Cebus_capucinus
ENSGMOG00000006105	srsf6a	62	70.391	ENSCCAG00000026018	-	61	76.829	Cebus_capucinus
ENSGMOG00000006105	srsf6a	62	70.391	ENSCATG00000030794	SRSF6	61	76.829	Cercocebus_atys
ENSGMOG00000006105	srsf6a	62	70.391	ENSCLAG00000010247	SRSF6	61	76.829	Chinchilla_lanigera
ENSGMOG00000006105	srsf6a	62	70.391	ENSCSAG00000014022	SRSF6	52	72.067	Chlorocebus_sabaeus
ENSGMOG00000006105	srsf6a	62	71.038	ENSCPBG00000018200	SRSF6	66	64.192	Chrysemys_picta_bellii
ENSGMOG00000006105	srsf6a	62	56.471	ENSCANG00000042529	-	66	49.576	Colobus_angolensis_palliatus
ENSGMOG00000006105	srsf6a	62	70.391	ENSCGRG00001022339	Srsf6	61	76.829	Cricetulus_griseus_chok1gshd
ENSGMOG00000006105	srsf6a	62	72.131	ENSDARG00000016783	srsf6b	99	75.532	Danio_rerio
ENSGMOG00000006105	srsf6a	62	70.391	ENSDNOG00000008410	SRSF6	52	72.067	Dasypus_novemcinctus
ENSGMOG00000006105	srsf6a	62	70.391	ENSDORG00000028378	Srsf6	61	76.829	Dipodomys_ordii
ENSGMOG00000006105	srsf6a	62	67.978	ENSETEG00000006221	SRSF6	52	70.225	Echinops_telfairi
ENSGMOG00000006105	srsf6a	62	70.950	ENSECAG00000023932	SRSF6	55	72.626	Equus_caballus
ENSGMOG00000006105	srsf6a	70	64.977	ENSELUG00000024182	SRSF6	87	74.157	Esox_lucius
ENSGMOG00000006105	srsf6a	58	80.380	ENSELUG00000013506	SRSF6	78	75.556	Esox_lucius
ENSGMOG00000006105	srsf6a	62	70.950	ENSFCAG00000032814	SRSF6	71	61.633	Felis_catus
ENSGMOG00000006105	srsf6a	98	55.822	ENSFHEG00000023065	srsf6a	74	59.514	Fundulus_heteroclitus
ENSGMOG00000006105	srsf6a	62	71.585	ENSGALG00000000990	SRSF6	61	78.313	Gallus_gallus
ENSGMOG00000006105	srsf6a	62	78.488	ENSGACG00000006084	srsf6a	67	59.322	Gasterosteus_aculeatus
ENSGMOG00000006105	srsf6a	62	71.038	ENSGAGG00000003238	SRSF6	66	64.192	Gopherus_agassizii
ENSGMOG00000006105	srsf6a	62	70.391	ENSGGOG00000009808	SRSF6	61	76.829	Gorilla_gorilla
ENSGMOG00000006105	srsf6a	81	66.960	ENSHBUG00000006386	-	56	74.857	Haplochromis_burtoni
ENSGMOG00000006105	srsf6a	62	58.235	ENSHGLG00000007701	-	55	58.683	Heterocephalus_glaber_female
ENSGMOG00000006105	srsf6a	62	70.391	ENSHGLG00000007348	SRSF6	61	76.829	Heterocephalus_glaber_female
ENSGMOG00000006105	srsf6a	62	75.287	ENSHCOG00000002740	srsf6a	56	77.011	Hippocampus_comes
ENSGMOG00000006105	srsf6a	62	74.857	ENSIPUG00000004776	-	62	74.857	Ictalurus_punctatus
ENSGMOG00000006105	srsf6a	62	70.391	ENSSTOG00000010866	SRSF6	61	76.829	Ictidomys_tridecemlineatus
ENSGMOG00000006105	srsf6a	96	60.870	ENSKMAG00000011934	srsf6a	70	68.780	Kryptolebias_marmoratus
ENSGMOG00000006105	srsf6a	62	73.481	ENSLBEG00000007356	srsf6a	50	75.138	Labrus_bergylta
ENSGMOG00000006105	srsf6a	97	53.398	ENSLACG00000005466	SRSF6	53	73.743	Latimeria_chalumnae
ENSGMOG00000006105	srsf6a	62	70.391	ENSMFAG00000036925	SRSF6	61	76.829	Macaca_fascicularis
ENSGMOG00000006105	srsf6a	62	70.391	ENSMMUG00000006742	SRSF6	61	76.829	Macaca_mulatta
ENSGMOG00000006105	srsf6a	62	69.444	ENSMNEG00000038270	-	52	71.508	Macaca_nemestrina
ENSGMOG00000006105	srsf6a	62	69.832	ENSMNEG00000027392	-	61	75.610	Macaca_nemestrina
ENSGMOG00000006105	srsf6a	62	73.481	ENSMAMG00000017161	srsf6a	52	74.586	Mastacembelus_armatus
ENSGMOG00000006105	srsf6a	80	62.771	ENSMZEG00005008032	-	55	74.857	Maylandia_zebra
ENSGMOG00000006105	srsf6a	62	69.832	ENSMICG00000008537	SRSF6	61	76.829	Microcebus_murinus
ENSGMOG00000006105	srsf6a	62	70.166	ENSMODG00000003107	SRSF6	67	63.877	Monodelphis_domestica
ENSGMOG00000006105	srsf6a	62	70.391	MGP_CAROLIEiJ_G0024606	Srsf6	61	76.829	Mus_caroli
ENSGMOG00000006105	srsf6a	62	70.391	ENSMUSG00000016921	Srsf6	61	76.829	Mus_musculus
ENSGMOG00000006105	srsf6a	62	70.391	MGP_PahariEiJ_G0026050	Srsf6	61	76.829	Mus_pahari
ENSGMOG00000006105	srsf6a	62	70.391	MGP_SPRETEiJ_G0025528	Srsf6	61	76.829	Mus_spretus
ENSGMOG00000006105	srsf6a	62	70.556	ENSMPUG00000017692	SRSF6	62	72.626	Mustela_putorius_furo
ENSGMOG00000006105	srsf6a	62	51.777	ENSMLUG00000016618	SRSF6	52	51.777	Myotis_lucifugus
ENSGMOG00000006105	srsf6a	62	70.391	ENSNGAG00000017560	Srsf6	61	76.829	Nannospalax_galili
ENSGMOG00000006105	srsf6a	62	73.143	ENSNBRG00000014709	-	56	74.857	Neolamprologus_brichardi
ENSGMOG00000006105	srsf6a	62	72.928	ENSNBRG00000001846	-	50	74.033	Neolamprologus_brichardi
ENSGMOG00000006105	srsf6a	62	70.391	ENSNLEG00000006524	SRSF6	61	76.829	Nomascus_leucogenys
ENSGMOG00000006105	srsf6a	62	70.166	ENSMEUG00000014615	SRSF6	59	72.222	Notamacropus_eugenii
ENSGMOG00000006105	srsf6a	62	72.159	ENSONIG00000020247	-	52	74.432	Oreochromis_niloticus
ENSGMOG00000006105	srsf6a	62	72.376	ENSONIG00000001925	-	51	74.586	Oreochromis_niloticus
ENSGMOG00000006105	srsf6a	62	54.787	ENSOCUG00000009785	-	61	57.838	Oryctolagus_cuniculus
ENSGMOG00000006105	srsf6a	61	44.848	ENSOCUG00000023999	-	69	47.904	Oryctolagus_cuniculus
ENSGMOG00000006105	srsf6a	62	69.832	ENSOGAG00000014468	SRSF6	52	71.508	Otolemur_garnettii
ENSGMOG00000006105	srsf6a	62	60.465	ENSPPAG00000043131	-	78	53.719	Pan_paniscus
ENSGMOG00000006105	srsf6a	62	69.832	ENSPPAG00000034327	-	52	71.508	Pan_paniscus
ENSGMOG00000006105	srsf6a	62	70.950	ENSPPRG00000008917	SRSF6	71	61.633	Panthera_pardus
ENSGMOG00000006105	srsf6a	62	70.391	ENSPTRG00000044686	-	61	76.829	Pan_troglodytes
ENSGMOG00000006105	srsf6a	62	60.465	ENSPTRG00000046274	-	78	53.719	Pan_troglodytes
ENSGMOG00000006105	srsf6a	62	70.391	ENSPANG00000035224	SRSF6	61	76.829	Papio_anubis
ENSGMOG00000006105	srsf6a	61	64.205	ENSPKIG00000015703	-	96	60.284	Paramormyrops_kingsleyae
ENSGMOG00000006105	srsf6a	94	62.057	ENSPKIG00000018463	-	99	69.524	Paramormyrops_kingsleyae
ENSGMOG00000006105	srsf6a	62	70.166	ENSPCIG00000003820	SRSF6	61	78.049	Phascolarctos_cinereus
ENSGMOG00000006105	srsf6a	62	73.653	ENSPLAG00000009243	srsf6a	84	70.677	Poecilia_latipinna
ENSGMOG00000006105	srsf6a	62	73.889	ENSPMEG00000006042	SRSF6	52	76.667	Poecilia_mexicana
ENSGMOG00000006105	srsf6a	62	70.391	ENSPPYG00000011019	SRSF6	52	72.067	Pongo_abelii
ENSGMOG00000006105	srsf6a	62	71.111	ENSPCAG00000010954	SRSF6	60	68.500	Procavia_capensis
ENSGMOG00000006105	srsf6a	62	69.832	ENSPCOG00000026364	SRSF6	61	76.829	Propithecus_coquereli
ENSGMOG00000006105	srsf6a	62	71.508	ENSPVAG00000015232	SRSF6	52	73.184	Pteropus_vampyrus
ENSGMOG00000006105	srsf6a	62	73.143	ENSPNYG00000004944	-	56	74.857	Pundamilia_nyererei
ENSGMOG00000006105	srsf6a	62	70.391	ENSRNOG00000006380	Srsf6	53	72.067	Rattus_norvegicus
ENSGMOG00000006105	srsf6a	62	71.839	ENSRBIG00000041414	SRSF6	61	78.481	Rhinopithecus_bieti
ENSGMOG00000006105	srsf6a	62	70.391	ENSRROG00000029989	SRSF6	61	76.829	Rhinopithecus_roxellana
ENSGMOG00000006105	srsf6a	62	70.391	ENSSBOG00000033708	-	61	76.829	Saimiri_boliviensis_boliviensis
ENSGMOG00000006105	srsf6a	62	61.905	ENSSBOG00000034078	-	53	61.905	Saimiri_boliviensis_boliviensis
ENSGMOG00000006105	srsf6a	62	70.166	ENSSHAG00000012805	SRSF6	53	72.222	Sarcophilus_harrisii
ENSGMOG00000006105	srsf6a	64	68.205	ENSSFOG00015019681	-	52	69.474	Scleropages_formosus
ENSGMOG00000006105	srsf6a	62	70.621	ENSSMAG00000017447	-	54	72.316	Scophthalmus_maximus
ENSGMOG00000006105	srsf6a	62	73.481	ENSSDUG00000016097	srsf6a	52	74.586	Seriola_dumerili
ENSGMOG00000006105	srsf6a	62	73.481	ENSSLDG00000022841	srsf6a	52	74.586	Seriola_lalandi_dorsalis
ENSGMOG00000006105	srsf6a	62	73.446	ENSSPUG00000004967	SRSF6	61	78.313	Sphenodon_punctatus
ENSGMOG00000006105	srsf6a	86	60.606	ENSSPAG00000002362	srsf6a	65	73.370	Stegastes_partitus
ENSGMOG00000006105	srsf6a	62	70.950	ENSSSCG00000007362	SRSF6	71	61.633	Sus_scrofa
ENSGMOG00000006105	srsf6a	62	72.222	ENSTGUG00000003455	SRSF6	52	73.333	Taeniopygia_guttata
ENSGMOG00000006105	srsf6a	62	71.823	ENSTNIG00000001692	srsf6a	55	74.033	Tetraodon_nigroviridis
ENSGMOG00000006105	srsf6a	62	70.950	ENSUAMG00000003559	SRSF6	61	78.049	Ursus_americanus
ENSGMOG00000006105	srsf6a	62	74.157	ENSXMAG00000021849	srsf6a	53	77.401	Xiphophorus_maculatus