EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000006122 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: si:dkey-37o8.1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 3676 bases
Position: chrGeneScaffold_4611:1076838-1080513
Accession: ZDB-GENE-030131-5667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000006489	GTP_EFTU	PF00009.27	5.5e-55	1	1
ENSGMOP00000006489	MMR_HSR1	PF01926.23	3e-08	1	1
ENSGMOP00000006489	GTP_EFTU_D2	PF03144.25	1.8e-09	1	1
ENSGMOP00000006489	GTP_EFTU_D3	PF03143.17	1.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000006680	-	1362	-	ENSGMOP00000006489	454 (aa)	-	UPI00023F0DF3

Gene Model

Click here to download ENSGMOG00000006122's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000006122's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000006122	si:dkey-37o8.1	98	66.591	ENSGMOG00000012005	-	96	66.591
ENSGMOG00000006122	si:dkey-37o8.1	96	37.900	ENSGMOG00000011843	hbs1l	63	37.900
ENSGMOG00000006122	si:dkey-37o8.1	96	34.703	ENSGMOG00000013056	GSPT1	71	34.703
ENSGMOG00000006122	si:dkey-37o8.1	100	67.538	ENSGMOG00000004205	eef1a1b	99	67.538
ENSGMOG00000006122	si:dkey-37o8.1	100	66.009	ENSGMOG00000011995	-	99	66.009

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000006122	si:dkey-37o8.1	99	81.027	ENSAPOG00000016459	si:dkey-37o8.1	98	81.027	Acanthochromis_polyacanthus
ENSGMOG00000006122	si:dkey-37o8.1	96	78.261	ENSACIG00000020985	si:dkey-37o8.1	82	78.261	Amphilophus_citrinellus
ENSGMOG00000006122	si:dkey-37o8.1	100	80.617	ENSAOCG00000002663	si:dkey-37o8.1	99	80.617	Amphiprion_ocellaris
ENSGMOG00000006122	si:dkey-37o8.1	100	80.617	ENSAPEG00000012670	si:dkey-37o8.1	99	80.617	Amphiprion_percula
ENSGMOG00000006122	si:dkey-37o8.1	93	81.991	ENSATEG00000002217	si:dkey-37o8.1	99	81.991	Anabas_testudineus
ENSGMOG00000006122	si:dkey-37o8.1	98	79.910	ENSACLG00000003519	si:dkey-37o8.1	97	79.910	Astatotilapia_calliptera
ENSGMOG00000006122	si:dkey-37o8.1	100	77.802	ENSAMXG00000002728	si:dkey-37o8.1	99	77.802	Astyanax_mexicanus
ENSGMOG00000006122	si:dkey-37o8.1	99	68.889	ENSCPBG00000020570	-	89	68.889	Chrysemys_picta_bellii
ENSGMOG00000006122	si:dkey-37o8.1	99	76.053	ENSCSEG00000019807	si:dkey-37o8.1	98	75.219	Cynoglossus_semilaevis
ENSGMOG00000006122	si:dkey-37o8.1	100	79.956	ENSCVAG00000009828	si:dkey-37o8.1	99	79.956	Cyprinodon_variegatus
ENSGMOG00000006122	si:dkey-37o8.1	99	76.549	ENSDARG00000071727	si:dkey-37o8.1	94	76.549	Danio_rerio
ENSGMOG00000006122	si:dkey-37o8.1	100	76.923	ENSELUG00000007495	si:dkey-37o8.1	99	76.923	Esox_lucius
ENSGMOG00000006122	si:dkey-37o8.1	100	77.974	ENSFHEG00000017452	si:dkey-37o8.1	99	77.974	Fundulus_heteroclitus
ENSGMOG00000006122	si:dkey-37o8.1	99	74.165	ENSGAFG00000000367	si:dkey-37o8.1	99	74.165	Gambusia_affinis
ENSGMOG00000006122	si:dkey-37o8.1	100	78.634	ENSGACG00000004505	si:dkey-37o8.1	99	78.634	Gasterosteus_aculeatus
ENSGMOG00000006122	si:dkey-37o8.1	97	70.615	ENSGAGG00000007724	-	93	77.885	Gopherus_agassizii
ENSGMOG00000006122	si:dkey-37o8.1	98	79.684	ENSHBUG00000015515	si:dkey-37o8.1	97	79.684	Haplochromis_burtoni
ENSGMOG00000006122	si:dkey-37o8.1	98	78.555	ENSHCOG00000001215	si:dkey-37o8.1	98	78.555	Hippocampus_comes
ENSGMOG00000006122	si:dkey-37o8.1	100	76.703	ENSIPUG00000004067	si:dkey-37o8.1	99	76.703	Ictalurus_punctatus
ENSGMOG00000006122	si:dkey-37o8.1	100	80.396	ENSKMAG00000015910	si:dkey-37o8.1	99	80.396	Kryptolebias_marmoratus
ENSGMOG00000006122	si:dkey-37o8.1	100	81.938	ENSLBEG00000021334	si:dkey-37o8.1	90	81.938	Labrus_bergylta
ENSGMOG00000006122	si:dkey-37o8.1	100	72.026	ENSLACG00000003948	si:dkey-37o8.1	99	72.026	Latimeria_chalumnae
ENSGMOG00000006122	si:dkey-37o8.1	100	75.658	ENSLOCG00000011245	si:dkey-37o8.1	99	75.658	Lepisosteus_oculatus
ENSGMOG00000006122	si:dkey-37o8.1	100	68.062	ENSMAMG00000009907	si:dkey-37o8.1	95	68.062	Mastacembelus_armatus
ENSGMOG00000006122	si:dkey-37o8.1	98	79.910	ENSMZEG00005018358	si:dkey-37o8.1	97	79.910	Maylandia_zebra
ENSGMOG00000006122	si:dkey-37o8.1	100	78.070	ENSMMOG00000004111	si:dkey-37o8.1	98	83.516	Mola_mola
ENSGMOG00000006122	si:dkey-37o8.1	96	71.918	ENSMALG00000017152	si:dkey-37o8.1	99	71.918	Monopterus_albus
ENSGMOG00000006122	si:dkey-37o8.1	98	79.910	ENSNBRG00000013552	si:dkey-37o8.1	97	79.910	Neolamprologus_brichardi
ENSGMOG00000006122	si:dkey-37o8.1	98	79.684	ENSONIG00000006165	si:dkey-37o8.1	97	79.684	Oreochromis_niloticus
ENSGMOG00000006122	si:dkey-37o8.1	100	80.396	ENSORLG00000019066	si:dkey-37o8.1	99	80.396	Oryzias_latipes
ENSGMOG00000006122	si:dkey-37o8.1	100	80.396	ENSORLG00020008094	si:dkey-37o8.1	99	80.396	Oryzias_latipes_hni
ENSGMOG00000006122	si:dkey-37o8.1	100	80.396	ENSORLG00015008410	si:dkey-37o8.1	99	80.396	Oryzias_latipes_hsok
ENSGMOG00000006122	si:dkey-37o8.1	99	81.898	ENSOMEG00000001868	si:dkey-37o8.1	99	81.898	Oryzias_melastigma
ENSGMOG00000006122	si:dkey-37o8.1	98	77.878	ENSPKIG00000017246	si:dkey-37o8.1	97	77.878	Paramormyrops_kingsleyae
ENSGMOG00000006122	si:dkey-37o8.1	59	59.636	ENSPSIG00000008080	-	97	59.636	Pelodiscus_sinensis
ENSGMOG00000006122	si:dkey-37o8.1	100	79.736	ENSPFOG00000013173	si:dkey-37o8.1	99	79.736	Poecilia_formosa
ENSGMOG00000006122	si:dkey-37o8.1	100	78.414	ENSPLAG00000010405	si:dkey-37o8.1	99	78.414	Poecilia_latipinna
ENSGMOG00000006122	si:dkey-37o8.1	100	79.736	ENSPMEG00000015233	si:dkey-37o8.1	99	79.736	Poecilia_mexicana
ENSGMOG00000006122	si:dkey-37o8.1	99	79.379	ENSPREG00000006280	si:dkey-37o8.1	99	82.072	Poecilia_reticulata
ENSGMOG00000006122	si:dkey-37o8.1	98	79.684	ENSPNYG00000002059	si:dkey-37o8.1	97	79.684	Pundamilia_nyererei
ENSGMOG00000006122	si:dkey-37o8.1	100	78.462	ENSPNAG00000009990	si:dkey-37o8.1	99	78.462	Pygocentrus_nattereri
ENSGMOG00000006122	si:dkey-37o8.1	98	77.201	ENSSFOG00015019070	si:dkey-37o8.1	97	77.201	Scleropages_formosus
ENSGMOG00000006122	si:dkey-37o8.1	99	81.596	ENSSMAG00000016143	si:dkey-37o8.1	99	81.596	Scophthalmus_maximus
ENSGMOG00000006122	si:dkey-37o8.1	100	81.718	ENSSDUG00000009163	si:dkey-37o8.1	99	81.718	Seriola_dumerili
ENSGMOG00000006122	si:dkey-37o8.1	100	81.938	ENSSLDG00000023761	si:dkey-37o8.1	99	81.938	Seriola_lalandi_dorsalis
ENSGMOG00000006122	si:dkey-37o8.1	99	68.000	ENSSPUG00000007467	-	98	68.000	Sphenodon_punctatus
ENSGMOG00000006122	si:dkey-37o8.1	99	81.015	ENSSPAG00000013856	si:dkey-37o8.1	99	81.015	Stegastes_partitus
ENSGMOG00000006122	si:dkey-37o8.1	97	81.818	ENSTRUG00000009006	si:dkey-37o8.1	98	81.818	Takifugu_rubripes
ENSGMOG00000006122	si:dkey-37o8.1	98	81.716	ENSTNIG00000017138	si:dkey-37o8.1	95	81.716	Tetraodon_nigroviridis
ENSGMOG00000006122	si:dkey-37o8.1	97	71.982	ENSXETG00000017744	42Sp50	97	70.288	Xenopus_tropicalis
ENSGMOG00000006122	si:dkey-37o8.1	99	79.823	ENSXCOG00000012296	si:dkey-37o8.1	98	86.813	Xiphophorus_couchianus
ENSGMOG00000006122	si:dkey-37o8.1	100	79.956	ENSXMAG00000001998	si:dkey-37o8.1	99	79.956	Xiphophorus_maculatus