EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000006370 (Gene tree)
Gene ID: -
Gene Symbol: smfn
Alias: zgc:73191
Full Name: small fragment nuclease
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 2524 bases
Position: chrGeneScaffold_4368:33740-36263
Accession: ZDB-GENE-040426-1709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000006762	RNase_T	PF00929.24	4.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000006957	-	579	-	ENSGMOP00000006762	193 (aa)	-	UPI00023F0CDC

Gene Model

Click here to download ENSGMOG00000006370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000006370's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000006370	smfn	94	80.663	ENSG00000076043	REXO2	92	79.191	Homo_sapiens
ENSGMOG00000006370	smfn	54	82.692	ENSAPOG00000011971	smfn	90	82.692	Acanthochromis_polyacanthus
ENSGMOG00000006370	smfn	94	80.663	ENSAMEG00000013263	REXO2	79	78.191	Ailuropoda_melanoleuca
ENSGMOG00000006370	smfn	90	82.759	ENSACIG00000023553	smfn	94	82.759	Amphilophus_citrinellus
ENSGMOG00000006370	smfn	75	69.333	ENSAOCG00000011565	smfn	91	69.333	Amphiprion_ocellaris
ENSGMOG00000006370	smfn	96	85.405	ENSAPEG00000012435	smfn	69	85.405	Amphiprion_percula
ENSGMOG00000006370	smfn	96	81.720	ENSATEG00000015385	smfn	67	81.720	Anabas_testudineus
ENSGMOG00000006370	smfn	93	78.771	ENSAPLG00000005045	REXO2	87	78.771	Anas_platyrhynchos
ENSGMOG00000006370	smfn	95	69.945	ENSACAG00000011631	REXO2	86	69.945	Anolis_carolinensis
ENSGMOG00000006370	smfn	94	81.215	ENSANAG00000020834	REXO2	79	78.723	Aotus_nancymaae
ENSGMOG00000006370	smfn	60	62.931	ENSANAG00000027457	-	81	62.931	Aotus_nancymaae
ENSGMOG00000006370	smfn	99	80.208	ENSACLG00000024566	smfn	91	81.034	Astatotilapia_calliptera
ENSGMOG00000006370	smfn	94	80.663	ENSBTAG00000005843	REXO2	79	78.191	Bos_taurus
ENSGMOG00000006370	smfn	94	48.352	WBGene00007429	C08B6.8	88	53.623	Caenorhabditis_elegans
ENSGMOG00000006370	smfn	94	81.215	ENSCJAG00000012434	REXO2	79	78.723	Callithrix_jacchus
ENSGMOG00000006370	smfn	94	80.110	ENSCAFG00000013511	REXO2	79	77.660	Canis_familiaris
ENSGMOG00000006370	smfn	94	80.663	ENSCAFG00020002513	REXO2	79	78.191	Canis_lupus_dingo
ENSGMOG00000006370	smfn	94	80.663	ENSCHIG00000009264	REXO2	79	78.191	Capra_hircus
ENSGMOG00000006370	smfn	94	81.215	ENSTSYG00000002237	REXO2	79	78.723	Carlito_syrichta
ENSGMOG00000006370	smfn	90	69.942	ENSTSYG00000027948	-	92	67.778	Carlito_syrichta
ENSGMOG00000006370	smfn	86	82.530	ENSCAPG00000006093	REXO2	92	79.769	Cavia_aperea
ENSGMOG00000006370	smfn	94	81.215	ENSCPOG00000010548	REXO2	79	78.723	Cavia_porcellus
ENSGMOG00000006370	smfn	94	81.215	ENSCCAG00000034979	REXO2	79	78.723	Cebus_capucinus
ENSGMOG00000006370	smfn	94	80.663	ENSCATG00000015278	REXO2	79	78.191	Cercocebus_atys
ENSGMOG00000006370	smfn	94	81.215	ENSCLAG00000011195	REXO2	80	78.723	Chinchilla_lanigera
ENSGMOG00000006370	smfn	94	80.663	ENSCSAG00000002754	REXO2	79	78.191	Chlorocebus_sabaeus
ENSGMOG00000006370	smfn	55	80.189	ENSCHOG00000013497	REXO2	76	80.189	Choloepus_hoffmanni
ENSGMOG00000006370	smfn	94	79.006	ENSCHOG00000000642	-	79	76.596	Choloepus_hoffmanni
ENSGMOG00000006370	smfn	68	74.046	ENSCPBG00000009359	REXO2	90	74.046	Chrysemys_picta_bellii
ENSGMOG00000006370	smfn	94	59.116	ENSCING00000009858	-	87	59.116	Ciona_intestinalis
ENSGMOG00000006370	smfn	94	80.663	ENSCANG00000034756	REXO2	79	78.191	Colobus_angolensis_palliatus
ENSGMOG00000006370	smfn	94	77.901	ENSCGRG00001010922	-	92	75.532	Cricetulus_griseus_chok1gshd
ENSGMOG00000006370	smfn	94	79.006	ENSCGRG00001013673	-	92	76.596	Cricetulus_griseus_chok1gshd
ENSGMOG00000006370	smfn	94	80.663	ENSCGRG00001019814	-	79	78.191	Cricetulus_griseus_chok1gshd
ENSGMOG00000006370	smfn	94	80.663	ENSCGRG00000006235	Rexo2	79	78.191	Cricetulus_griseus_crigri
ENSGMOG00000006370	smfn	94	87.845	ENSCSEG00000007214	smfn	68	86.170	Cynoglossus_semilaevis
ENSGMOG00000006370	smfn	90	78.613	ENSCVAG00000012008	smfn	94	78.613	Cyprinodon_variegatus
ENSGMOG00000006370	smfn	99	82.199	ENSDARG00000009806	smfn	74	82.199	Danio_rerio
ENSGMOG00000006370	smfn	91	82.286	ENSDNOG00000046533	REXO2	84	82.286	Dasypus_novemcinctus
ENSGMOG00000006370	smfn	94	81.215	ENSDORG00000011255	Rexo2	79	78.723	Dipodomys_ordii
ENSGMOG00000006370	smfn	90	63.584	ENSDORG00000025142	-	83	58.639	Dipodomys_ordii
ENSGMOG00000006370	smfn	96	50.000	FBgn0039115	CG10214	91	50.000	Drosophila_melanogaster
ENSGMOG00000006370	smfn	93	77.654	ENSEBUG00000013964	REXO2	61	77.654	Eptatretus_burgeri
ENSGMOG00000006370	smfn	94	80.663	ENSEASG00005006674	REXO2	79	78.191	Equus_asinus_asinus
ENSGMOG00000006370	smfn	94	80.663	ENSECAG00000005988	REXO2	79	78.191	Equus_caballus
ENSGMOG00000006370	smfn	99	87.435	ENSELUG00000020072	smfn	66	87.435	Esox_lucius
ENSGMOG00000006370	smfn	94	80.663	ENSFCAG00000018632	REXO2	79	78.191	Felis_catus
ENSGMOG00000006370	smfn	90	79.310	ENSFALG00000010044	REXO2	86	79.310	Ficedula_albicollis
ENSGMOG00000006370	smfn	94	81.215	ENSFDAG00000011764	REXO2	79	78.723	Fukomys_damarensis
ENSGMOG00000006370	smfn	94	80.769	ENSGALG00000035980	REXO2	79	80.000	Gallus_gallus
ENSGMOG00000006370	smfn	98	80.000	ENSGAFG00000015349	smfn	68	80.000	Gambusia_affinis
ENSGMOG00000006370	smfn	97	81.915	ENSGACG00000020096	smfn	93	81.915	Gasterosteus_aculeatus
ENSGMOG00000006370	smfn	99	75.916	ENSGAGG00000021126	REXO2	83	75.916	Gopherus_agassizii
ENSGMOG00000006370	smfn	94	80.663	ENSGGOG00000023267	REXO2	77	81.988	Gorilla_gorilla
ENSGMOG00000006370	smfn	99	58.115	ENSHBUG00000020097	REXO2	70	58.115	Haplochromis_burtoni
ENSGMOG00000006370	smfn	94	80.663	ENSHGLG00000013556	REXO2	79	78.191	Heterocephalus_glaber_female
ENSGMOG00000006370	smfn	94	81.215	ENSHGLG00100005257	REXO2	79	78.723	Heterocephalus_glaber_male
ENSGMOG00000006370	smfn	87	79.042	ENSHCOG00000007122	smfn	94	79.042	Hippocampus_comes
ENSGMOG00000006370	smfn	97	85.561	ENSIPUG00000020440	rexo2	70	84.817	Ictalurus_punctatus
ENSGMOG00000006370	smfn	94	81.215	ENSSTOG00000012465	REXO2	79	78.723	Ictidomys_tridecemlineatus
ENSGMOG00000006370	smfn	97	54.787	ENSJJAG00000022605	-	74	54.787	Jaculus_jaculus
ENSGMOG00000006370	smfn	94	81.215	ENSJJAG00000013710	-	79	78.723	Jaculus_jaculus
ENSGMOG00000006370	smfn	94	83.516	ENSKMAG00000016795	smfn	68	82.812	Kryptolebias_marmoratus
ENSGMOG00000006370	smfn	90	83.237	ENSLBEG00000006021	smfn	92	83.237	Labrus_bergylta
ENSGMOG00000006370	smfn	96	71.809	ENSLACG00000018623	REXO2	77	71.809	Latimeria_chalumnae
ENSGMOG00000006370	smfn	99	82.723	ENSLOCG00000002389	smfn	91	82.723	Lepisosteus_oculatus
ENSGMOG00000006370	smfn	93	82.682	ENSLAFG00000012451	REXO2	79	79.255	Loxodonta_africana
ENSGMOG00000006370	smfn	94	80.663	ENSMFAG00000041155	REXO2	79	78.191	Macaca_fascicularis
ENSGMOG00000006370	smfn	94	80.663	ENSMMUG00000012269	REXO2	79	78.191	Macaca_mulatta
ENSGMOG00000006370	smfn	94	80.663	ENSMNEG00000033379	REXO2	79	78.191	Macaca_nemestrina
ENSGMOG00000006370	smfn	94	80.663	ENSMLEG00000036571	REXO2	79	78.191	Mandrillus_leucophaeus
ENSGMOG00000006370	smfn	99	82.199	ENSMAMG00000021209	smfn	69	82.199	Mastacembelus_armatus
ENSGMOG00000006370	smfn	99	80.208	ENSMZEG00005020730	REXO2	73	80.208	Maylandia_zebra
ENSGMOG00000006370	smfn	99	80.208	ENSMZEG00005023224	-	73	80.208	Maylandia_zebra
ENSGMOG00000006370	smfn	76	77.852	ENSMGAG00000003026	REXO2	91	77.852	Meleagris_gallopavo
ENSGMOG00000006370	smfn	94	80.663	ENSMAUG00000014576	Rexo2	79	78.191	Mesocricetus_auratus
ENSGMOG00000006370	smfn	94	81.215	ENSMICG00000010094	REXO2	79	78.723	Microcebus_murinus
ENSGMOG00000006370	smfn	97	78.191	ENSMOCG00000009016	Rexo2	79	78.191	Microtus_ochrogaster
ENSGMOG00000006370	smfn	98	79.894	ENSMMOG00000006430	smfn	70	79.894	Mola_mola
ENSGMOG00000006370	smfn	97	78.191	ENSMODG00000013913	REXO2	80	78.191	Monodelphis_domestica
ENSGMOG00000006370	smfn	98	82.632	ENSMALG00000018130	smfn	54	82.632	Monopterus_albus
ENSGMOG00000006370	smfn	94	79.558	MGP_CAROLIEiJ_G0032166	Rexo2	79	77.128	Mus_caroli
ENSGMOG00000006370	smfn	94	79.558	ENSMUSG00000032026	Rexo2	79	77.128	Mus_musculus
ENSGMOG00000006370	smfn	94	79.558	MGP_PahariEiJ_G0015034	Rexo2	79	77.128	Mus_pahari
ENSGMOG00000006370	smfn	94	79.558	MGP_SPRETEiJ_G0033305	Rexo2	79	77.128	Mus_spretus
ENSGMOG00000006370	smfn	94	80.663	ENSMPUG00000003947	REXO2	79	78.191	Mustela_putorius_furo
ENSGMOG00000006370	smfn	94	81.215	ENSMLUG00000009030	REXO2	79	78.723	Myotis_lucifugus
ENSGMOG00000006370	smfn	94	81.215	ENSNGAG00000008819	Rexo2	92	78.723	Nannospalax_galili
ENSGMOG00000006370	smfn	90	81.034	ENSNBRG00000006529	smfn	91	81.034	Neolamprologus_brichardi
ENSGMOG00000006370	smfn	94	80.663	ENSNLEG00000029745	REXO2	79	78.191	Nomascus_leucogenys
ENSGMOG00000006370	smfn	97	77.660	ENSMEUG00000011558	REXO2	86	77.660	Notamacropus_eugenii
ENSGMOG00000006370	smfn	94	54.696	ENSOPRG00000011076	REXO2	79	53.191	Ochotona_princeps
ENSGMOG00000006370	smfn	86	82.530	ENSODEG00000009750	-	92	79.769	Octodon_degus
ENSGMOG00000006370	smfn	91	64.773	ENSODEG00000016046	-	88	64.773	Octodon_degus
ENSGMOG00000006370	smfn	99	80.208	ENSONIG00000001954	smfn	82	80.208	Oreochromis_niloticus
ENSGMOG00000006370	smfn	94	79.006	ENSOANG00000001754	REXO2	79	77.128	Ornithorhynchus_anatinus
ENSGMOG00000006370	smfn	94	81.215	ENSOCUG00000004274	REXO2	75	78.723	Oryctolagus_cuniculus
ENSGMOG00000006370	smfn	97	82.979	ENSORLG00000005119	smfn	61	82.979	Oryzias_latipes
ENSGMOG00000006370	smfn	97	82.979	ENSORLG00020010121	smfn	61	82.979	Oryzias_latipes_hni
ENSGMOG00000006370	smfn	97	82.979	ENSORLG00015015699	smfn	61	82.979	Oryzias_latipes_hsok
ENSGMOG00000006370	smfn	68	80.916	ENSOMEG00000008940	-	92	80.916	Oryzias_melastigma
ENSGMOG00000006370	smfn	98	81.481	ENSOMEG00000016878	REXO2	69	81.481	Oryzias_melastigma
ENSGMOG00000006370	smfn	94	81.215	ENSOGAG00000016860	REXO2	79	78.723	Otolemur_garnettii
ENSGMOG00000006370	smfn	93	81.564	ENSOARG00000001040	REXO2	90	76.562	Ovis_aries
ENSGMOG00000006370	smfn	94	80.663	ENSPPAG00000039849	REXO2	79	78.191	Pan_paniscus
ENSGMOG00000006370	smfn	94	80.663	ENSPPRG00000007255	REXO2	79	78.191	Panthera_pardus
ENSGMOG00000006370	smfn	86	81.928	ENSPTIG00000015578	REXO2	92	79.191	Panthera_tigris_altaica
ENSGMOG00000006370	smfn	94	80.663	ENSPTRG00000004306	REXO2	79	78.191	Pan_troglodytes
ENSGMOG00000006370	smfn	94	80.663	ENSPANG00000010675	REXO2	79	78.191	Papio_anubis
ENSGMOG00000006370	smfn	99	84.817	ENSPKIG00000000911	smfn	77	91.216	Paramormyrops_kingsleyae
ENSGMOG00000006370	smfn	96	80.000	ENSPSIG00000005151	REXO2	68	78.723	Pelodiscus_sinensis
ENSGMOG00000006370	smfn	90	84.971	ENSPMGG00000007442	smfn	92	84.971	Periophthalmus_magnuspinnatus
ENSGMOG00000006370	smfn	94	64.088	ENSPEMG00000001421	Rexo2	78	62.234	Peromyscus_maniculatus_bairdii
ENSGMOG00000006370	smfn	59	74.561	ENSPMAG00000001022	REXO2	98	74.561	Petromyzon_marinus
ENSGMOG00000006370	smfn	97	78.191	ENSPCIG00000011227	REXO2	50	78.191	Phascolarctos_cinereus
ENSGMOG00000006370	smfn	98	81.053	ENSPFOG00000017861	smfn	92	81.818	Poecilia_formosa
ENSGMOG00000006370	smfn	93	78.333	ENSPLAG00000007327	REXO2	68	78.333	Poecilia_latipinna
ENSGMOG00000006370	smfn	98	81.053	ENSPMEG00000017343	smfn	68	81.053	Poecilia_mexicana
ENSGMOG00000006370	smfn	98	80.000	ENSPREG00000016438	smfn	68	80.000	Poecilia_reticulata
ENSGMOG00000006370	smfn	94	80.663	ENSPPYG00000003895	REXO2	79	78.191	Pongo_abelii
ENSGMOG00000006370	smfn	93	81.006	ENSPCAG00000005237	REXO2	79	77.660	Procavia_capensis
ENSGMOG00000006370	smfn	83	82.609	ENSPCOG00000027639	REXO2	83	82.609	Propithecus_coquereli
ENSGMOG00000006370	smfn	94	68.306	ENSPVAG00000005295	REXO2	79	66.316	Pteropus_vampyrus
ENSGMOG00000006370	smfn	99	79.688	ENSPNYG00000018401	smfn	73	79.688	Pundamilia_nyererei
ENSGMOG00000006370	smfn	95	88.043	ENSPNAG00000005290	smfn	70	86.387	Pygocentrus_nattereri
ENSGMOG00000006370	smfn	94	79.558	ENSRNOG00000018939	Rexo2	79	77.128	Rattus_norvegicus
ENSGMOG00000006370	smfn	94	80.663	ENSRBIG00000037809	REXO2	79	78.191	Rhinopithecus_bieti
ENSGMOG00000006370	smfn	94	80.663	ENSRROG00000038928	REXO2	79	78.191	Rhinopithecus_roxellana
ENSGMOG00000006370	smfn	94	42.328	YLR059C	REX2	70	42.328	Saccharomyces_cerevisiae
ENSGMOG00000006370	smfn	94	81.215	ENSSBOG00000028651	REXO2	79	78.723	Saimiri_boliviensis_boliviensis
ENSGMOG00000006370	smfn	97	78.191	ENSSHAG00000008008	REXO2	80	78.191	Sarcophilus_harrisii
ENSGMOG00000006370	smfn	90	83.237	ENSSFOG00015022414	smfn	92	83.237	Scleropages_formosus
ENSGMOG00000006370	smfn	98	82.632	ENSSMAG00000003168	smfn	69	82.632	Scophthalmus_maximus
ENSGMOG00000006370	smfn	97	81.915	ENSSDUG00000015624	smfn	66	81.915	Seriola_dumerili
ENSGMOG00000006370	smfn	97	82.447	ENSSLDG00000014005	smfn	66	82.447	Seriola_lalandi_dorsalis
ENSGMOG00000006370	smfn	66	85.039	ENSSARG00000014530	REXO2	100	85.039	Sorex_araneus
ENSGMOG00000006370	smfn	75	75.172	ENSSPUG00000006005	REXO2	78	75.172	Sphenodon_punctatus
ENSGMOG00000006370	smfn	90	85.549	ENSSPAG00000001530	smfn	93	85.549	Stegastes_partitus
ENSGMOG00000006370	smfn	94	80.663	ENSSSCG00000015056	REXO2	77	81.988	Sus_scrofa
ENSGMOG00000006370	smfn	95	79.348	ENSTGUG00000000121	REXO2	79	78.919	Taeniopygia_guttata
ENSGMOG00000006370	smfn	91	81.818	ENSTRUG00000021529	smfn	69	80.000	Takifugu_rubripes
ENSGMOG00000006370	smfn	93	84.358	ENSTNIG00000008588	smfn	83	82.979	Tetraodon_nigroviridis
ENSGMOG00000006370	smfn	94	81.215	ENSTBEG00000017040	REXO2	79	78.723	Tupaia_belangeri
ENSGMOG00000006370	smfn	94	81.215	ENSTTRG00000014928	REXO2	79	78.723	Tursiops_truncatus
ENSGMOG00000006370	smfn	94	73.077	ENSUAMG00000019096	REXO2	83	81.988	Ursus_americanus
ENSGMOG00000006370	smfn	94	80.663	ENSUMAG00000003770	REXO2	79	78.191	Ursus_maritimus
ENSGMOG00000006370	smfn	86	60.843	ENSVPAG00000006301	REXO2	93	59.538	Vicugna_pacos
ENSGMOG00000006370	smfn	94	80.663	ENSVVUG00000025223	REXO2	80	78.191	Vulpes_vulpes
ENSGMOG00000006370	smfn	98	80.423	ENSXETG00000012648	rexo2	78	80.000	Xenopus_tropicalis
ENSGMOG00000006370	smfn	92	79.213	ENSXCOG00000018838	smfn	88	80.925	Xiphophorus_couchianus
ENSGMOG00000006370	smfn	97	80.214	ENSXMAG00000021125	smfn	60	80.214	Xiphophorus_maculatus