EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000006564 (Gene tree)
Gene ID: -
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 18293 bases
Position: chrGeneScaffold_3784:89831-108123
Accession: ZDB-GENE-060810-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000006993	zf-CCCH	PF00642.24	9.8e-05	1	1
ENSGMOP00000006993	TRM	PF02005.16	8.9e-131	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000007194	-	1707	-	ENSGMOP00000006993	569 (aa)	-	UPI00023F0FE8

Gene Model

Click here to download ENSGMOG00000006564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000006564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000006564	trmt1	98	62.195	ENSG00000104907	TRMT1	100	60.938	Homo_sapiens
ENSGMOG00000006564	trmt1	98	60.771	ENSAMEG00000012598	TRMT1	85	60.245	Ailuropoda_melanoleuca
ENSGMOG00000006564	trmt1	99	62.324	ENSACIG00000018680	trmt1	88	61.092	Amphilophus_citrinellus
ENSGMOG00000006564	trmt1	99	74.692	ENSAOCG00000006781	trmt1	86	74.165	Amphiprion_ocellaris
ENSGMOG00000006564	trmt1	99	74.692	ENSAPEG00000007712	trmt1	86	74.165	Amphiprion_percula
ENSGMOG00000006564	trmt1	99	75.789	ENSATEG00000001872	trmt1	85	75.088	Anabas_testudineus
ENSGMOG00000006564	trmt1	98	61.930	ENSACAG00000003825	TRMT1	92	61.404	Anolis_carolinensis
ENSGMOG00000006564	trmt1	98	60.558	ENSANAG00000023016	TRMT1	92	60.035	Aotus_nancymaae
ENSGMOG00000006564	trmt1	99	70.826	ENSACLG00000010073	trmt1	93	70.123	Astatotilapia_calliptera
ENSGMOG00000006564	trmt1	99	70.209	ENSAMXG00000012026	trmt1	86	69.861	Astyanax_mexicanus
ENSGMOG00000006564	trmt1	99	61.034	ENSBTAG00000019325	TRMT1	83	60.517	Bos_taurus
ENSGMOG00000006564	trmt1	88	39.922	WBGene00006613	trm-1	92	39.535	Caenorhabditis_elegans
ENSGMOG00000006564	trmt1	98	59.722	ENSCJAG00000004566	TRMT1	88	59.201	Callithrix_jacchus
ENSGMOG00000006564	trmt1	98	61.296	ENSCAFG00000017070	TRMT1	90	60.771	Canis_familiaris
ENSGMOG00000006564	trmt1	98	61.160	ENSCAFG00020005397	TRMT1	88	60.633	Canis_lupus_dingo
ENSGMOG00000006564	trmt1	99	61.446	ENSCHIG00000013569	TRMT1	88	60.757	Capra_hircus
ENSGMOG00000006564	trmt1	98	60.174	ENSTSYG00000003207	TRMT1	87	60.000	Carlito_syrichta
ENSGMOG00000006564	trmt1	91	55.955	ENSCAPG00000003355	TRMT1	94	55.955	Cavia_aperea
ENSGMOG00000006564	trmt1	98	58.669	ENSCPOG00000011754	TRMT1	87	58.669	Cavia_porcellus
ENSGMOG00000006564	trmt1	98	59.860	ENSCCAG00000022263	TRMT1	92	59.337	Cebus_capucinus
ENSGMOG00000006564	trmt1	79	51.627	ENSCATG00000038220	-	91	51.111	Cercocebus_atys
ENSGMOG00000006564	trmt1	98	61.780	ENSCATG00000039850	TRMT1	87	61.257	Cercocebus_atys
ENSGMOG00000006564	trmt1	98	60.839	ENSCLAG00000015295	TRMT1	89	60.281	Chinchilla_lanigera
ENSGMOG00000006564	trmt1	82	64.768	ENSCSAG00000006500	TRMT1	89	64.135	Chlorocebus_sabaeus
ENSGMOG00000006564	trmt1	98	63.251	ENSCPBG00000023866	TRMT1	85	63.074	Chrysemys_picta_bellii
ENSGMOG00000006564	trmt1	93	46.112	ENSCING00000002884	-	97	46.225	Ciona_intestinalis
ENSGMOG00000006564	trmt1	93	47.858	ENSCSAVG00000010927	-	100	46.654	Ciona_savignyi
ENSGMOG00000006564	trmt1	95	48.022	ENSCANG00000031650	-	87	48.468	Colobus_angolensis_palliatus
ENSGMOG00000006564	trmt1	98	47.909	ENSCANG00000040631	TRMT1	87	47.387	Colobus_angolensis_palliatus
ENSGMOG00000006564	trmt1	98	60.279	ENSCGRG00001022594	Trmt1	87	60.209	Cricetulus_griseus_chok1gshd
ENSGMOG00000006564	trmt1	98	60.279	ENSCGRG00000017732	Trmt1	86	60.209	Cricetulus_griseus_crigri
ENSGMOG00000006564	trmt1	99	73.063	ENSCSEG00000001643	trmt1	84	74.168	Cynoglossus_semilaevis
ENSGMOG00000006564	trmt1	99	74.517	ENSCVAG00000011886	trmt1	86	73.768	Cyprinodon_variegatus
ENSGMOG00000006564	trmt1	99	68.458	ENSDARG00000010978	trmt1	86	68.111	Danio_rerio
ENSGMOG00000006564	trmt1	89	41.065	ENSDNOG00000048240	-	89	40.494	Dasypus_novemcinctus
ENSGMOG00000006564	trmt1	98	59.582	ENSDORG00000014298	Trmt1	87	59.059	Dipodomys_ordii
ENSGMOG00000006564	trmt1	94	44.585	FBgn0032430	CG6388	92	44.224	Drosophila_melanogaster
ENSGMOG00000006564	trmt1	99	46.643	ENSEBUG00000003449	trmt1	77	49.049	Eptatretus_burgeri
ENSGMOG00000006564	trmt1	98	59.686	ENSEASG00005004050	TRMT1	90	59.441	Equus_asinus_asinus
ENSGMOG00000006564	trmt1	98	59.860	ENSECAG00000016149	TRMT1	90	59.686	Equus_caballus
ENSGMOG00000006564	trmt1	68	48.111	ENSEEUG00000014102	-	100	48.111	Erinaceus_europaeus
ENSGMOG00000006564	trmt1	99	70.537	ENSELUG00000021659	trmt1	86	70.191	Esox_lucius
ENSGMOG00000006564	trmt1	98	60.035	ENSFCAG00000000483	TRMT1	87	60.035	Felis_catus
ENSGMOG00000006564	trmt1	98	60.558	ENSFDAG00000007386	TRMT1	87	60.070	Fukomys_damarensis
ENSGMOG00000006564	trmt1	89	76.321	ENSFHEG00000012865	trmt1	85	76.321	Fundulus_heteroclitus
ENSGMOG00000006564	trmt1	99	74.250	ENSGAFG00000011862	trmt1	89	74.074	Gambusia_affinis
ENSGMOG00000006564	trmt1	99	76.450	ENSGACG00000000227	trmt1	93	76.450	Gasterosteus_aculeatus
ENSGMOG00000006564	trmt1	98	63.055	ENSGAGG00000016432	TRMT1	84	62.345	Gopherus_agassizii
ENSGMOG00000006564	trmt1	98	62.195	ENSGGOG00000014007	TRMT1	87	61.672	Gorilla_gorilla
ENSGMOG00000006564	trmt1	96	62.842	ENSHBUG00000008821	trmt1	92	61.749	Haplochromis_burtoni
ENSGMOG00000006564	trmt1	98	60.245	ENSHGLG00000015972	TRMT1	87	60.245	Heterocephalus_glaber_female
ENSGMOG00000006564	trmt1	98	57.093	ENSHGLG00100018112	TRMT1	87	57.093	Heterocephalus_glaber_male
ENSGMOG00000006564	trmt1	99	69.177	ENSHCOG00000009447	trmt1	89	69.177	Hippocampus_comes
ENSGMOG00000006564	trmt1	99	66.156	ENSIPUG00000002899	trmt1	85	66.265	Ictalurus_punctatus
ENSGMOG00000006564	trmt1	98	59.790	ENSSTOG00000012531	TRMT1	88	59.790	Ictidomys_tridecemlineatus
ENSGMOG00000006564	trmt1	98	60.279	ENSJJAG00000017154	Trmt1	88	59.756	Jaculus_jaculus
ENSGMOG00000006564	trmt1	99	73.814	ENSKMAG00000011809	trmt1	96	72.359	Kryptolebias_marmoratus
ENSGMOG00000006564	trmt1	99	74.427	ENSLBEG00000012703	trmt1	85	74.074	Labrus_bergylta
ENSGMOG00000006564	trmt1	99	53.147	ENSLACG00000014585	TRMT1	94	52.548	Latimeria_chalumnae
ENSGMOG00000006564	trmt1	99	64.134	ENSLOCG00000006479	trmt1	98	64.716	Lepisosteus_oculatus
ENSGMOG00000006564	trmt1	98	60.764	ENSLAFG00000014072	TRMT1	88	60.243	Loxodonta_africana
ENSGMOG00000006564	trmt1	98	61.780	ENSMFAG00000033143	TRMT1	87	61.257	Macaca_fascicularis
ENSGMOG00000006564	trmt1	98	60.105	ENSMMUG00000001167	TRMT1	87	59.754	Macaca_mulatta
ENSGMOG00000006564	trmt1	98	61.606	ENSMNEG00000037867	TRMT1	87	61.082	Macaca_nemestrina
ENSGMOG00000006564	trmt1	98	61.606	ENSMLEG00000016142	TRMT1	87	61.082	Mandrillus_leucophaeus
ENSGMOG00000006564	trmt1	99	74.603	ENSMAMG00000004357	trmt1	85	74.603	Mastacembelus_armatus
ENSGMOG00000006564	trmt1	99	71.353	ENSMZEG00005014510	trmt1	86	70.650	Maylandia_zebra
ENSGMOG00000006564	trmt1	99	60.069	ENSMAUG00000011134	Trmt1	87	59.722	Mesocricetus_auratus
ENSGMOG00000006564	trmt1	98	61.606	ENSMICG00000000793	TRMT1	87	61.082	Microcebus_murinus
ENSGMOG00000006564	trmt1	98	60.558	ENSMOCG00000015895	Trmt1	87	60.035	Microtus_ochrogaster
ENSGMOG00000006564	trmt1	99	72.792	ENSMMOG00000011097	trmt1	92	71.908	Mola_mola
ENSGMOG00000006564	trmt1	98	60.739	ENSMODG00000011619	TRMT1	92	60.739	Monodelphis_domestica
ENSGMOG00000006564	trmt1	98	60.702	MGP_CAROLIEiJ_G0031304	Trmt1	88	65.502	Mus_caroli
ENSGMOG00000006564	trmt1	98	60.702	ENSMUSG00000001909	Trmt1	88	65.066	Mus_musculus
ENSGMOG00000006564	trmt1	98	60.526	MGP_SPRETEiJ_G0032422	Trmt1	88	64.629	Mus_spretus
ENSGMOG00000006564	trmt1	98	61.672	ENSMPUG00000004210	TRMT1	82	61.150	Mustela_putorius_furo
ENSGMOG00000006564	trmt1	99	61.592	ENSMLUG00000012809	TRMT1	86	61.458	Myotis_lucifugus
ENSGMOG00000006564	trmt1	98	60.976	ENSNGAG00000022486	Trmt1	86	60.279	Nannospalax_galili
ENSGMOG00000006564	trmt1	85	78.882	ENSNBRG00000024376	trmt1	85	76.398	Neolamprologus_brichardi
ENSGMOG00000006564	trmt1	76	66.786	ENSNLEG00000013019	-	83	65.714	Nomascus_leucogenys
ENSGMOG00000006564	trmt1	98	60.457	ENSMEUG00000013756	TRMT1	97	60.457	Notamacropus_eugenii
ENSGMOG00000006564	trmt1	79	74.000	ENSOPRG00000009471	-	71	74.000	Ochotona_princeps
ENSGMOG00000006564	trmt1	98	60.351	ENSODEG00000010323	TRMT1	87	60.351	Octodon_degus
ENSGMOG00000006564	trmt1	99	74.868	ENSONIG00000000400	trmt1	91	74.245	Oreochromis_niloticus
ENSGMOG00000006564	trmt1	82	64.000	ENSOCUG00000021934	TRMT1	90	64.421	Oryctolagus_cuniculus
ENSGMOG00000006564	trmt1	99	68.394	ENSORLG00000020074	trmt1	91	68.394	Oryzias_latipes
ENSGMOG00000006564	trmt1	99	73.286	ENSORLG00020007561	trmt1	90	72.456	Oryzias_latipes_hni
ENSGMOG00000006564	trmt1	99	72.935	ENSORLG00015006547	trmt1	87	72.935	Oryzias_latipes_hsok
ENSGMOG00000006564	trmt1	99	73.638	ENSOMEG00000019343	trmt1	87	73.286	Oryzias_melastigma
ENSGMOG00000006564	trmt1	98	60.938	ENSOGAG00000025576	TRMT1	90	60.938	Otolemur_garnettii
ENSGMOG00000006564	trmt1	99	52.504	ENSOARG00000009397	TRMT1	76	58.850	Ovis_aries
ENSGMOG00000006564	trmt1	86	64.839	ENSPPRG00000012117	TRMT1	87	56.119	Panthera_pardus
ENSGMOG00000006564	trmt1	75	63.265	ENSPTIG00000008833	TRMT1	84	63.265	Panthera_tigris_altaica
ENSGMOG00000006564	trmt1	96	45.870	ENSPTRG00000050421	-	91	45.122	Pan_troglodytes
ENSGMOG00000006564	trmt1	98	62.195	ENSPTRG00000010557	TRMT1	87	61.672	Pan_troglodytes
ENSGMOG00000006564	trmt1	98	61.780	ENSPANG00000009247	TRMT1	87	61.257	Papio_anubis
ENSGMOG00000006564	trmt1	76	52.715	ENSPANG00000034058	-	78	52.036	Papio_anubis
ENSGMOG00000006564	trmt1	100	69.459	ENSPKIG00000005309	trmt1	86	69.459	Paramormyrops_kingsleyae
ENSGMOG00000006564	trmt1	96	50.722	ENSPSIG00000008762	TRMT1	80	50.542	Pelodiscus_sinensis
ENSGMOG00000006564	trmt1	99	71.605	ENSPMGG00000019764	trmt1	91	71.429	Periophthalmus_magnuspinnatus
ENSGMOG00000006564	trmt1	98	60.208	ENSPEMG00000016247	Trmt1	86	60.000	Peromyscus_maniculatus_bairdii
ENSGMOG00000006564	trmt1	97	58.528	ENSPMAG00000004329	trmt1	89	58.528	Petromyzon_marinus
ENSGMOG00000006564	trmt1	98	60.739	ENSPCIG00000019273	TRMT1	88	60.739	Phascolarctos_cinereus
ENSGMOG00000006564	trmt1	99	74.205	ENSPFOG00000008527	trmt1	88	73.852	Poecilia_formosa
ENSGMOG00000006564	trmt1	99	73.145	ENSPLAG00000018788	trmt1	89	74.713	Poecilia_latipinna
ENSGMOG00000006564	trmt1	99	74.028	ENSPMEG00000013120	trmt1	88	73.675	Poecilia_mexicana
ENSGMOG00000006564	trmt1	99	72.566	ENSPREG00000000211	trmt1	85	72.389	Poecilia_reticulata
ENSGMOG00000006564	trmt1	98	61.672	ENSPPYG00000009622	TRMT1	87	61.150	Pongo_abelii
ENSGMOG00000006564	trmt1	98	55.672	ENSPCAG00000003698	TRMT1	88	55.672	Procavia_capensis
ENSGMOG00000006564	trmt1	98	60.733	ENSPCOG00000008653	TRMT1	87	60.209	Propithecus_coquereli
ENSGMOG00000006564	trmt1	98	61.150	ENSPVAG00000015076	TRMT1	87	60.627	Pteropus_vampyrus
ENSGMOG00000006564	trmt1	99	70.123	ENSPNYG00000013960	trmt1	93	69.420	Pundamilia_nyererei
ENSGMOG00000006564	trmt1	82	67.932	ENSPNAG00000024859	trmt1	83	67.932	Pygocentrus_nattereri
ENSGMOG00000006564	trmt1	98	60.175	ENSRNOG00000002914	Trmt1	89	60.175	Rattus_norvegicus
ENSGMOG00000006564	trmt1	95	45.961	ENSRBIG00000037505	-	87	45.961	Rhinopithecus_bieti
ENSGMOG00000006564	trmt1	98	62.129	ENSRBIG00000038324	TRMT1	87	61.606	Rhinopithecus_bieti
ENSGMOG00000006564	trmt1	98	62.129	ENSRROG00000028599	TRMT1	87	61.606	Rhinopithecus_roxellana
ENSGMOG00000006564	trmt1	95	45.307	ENSRROG00000031847	-	86	45.307	Rhinopithecus_roxellana
ENSGMOG00000006564	trmt1	82	35.135	YDR120C	-	83	34.855	Saccharomyces_cerevisiae
ENSGMOG00000006564	trmt1	98	60.035	ENSSBOG00000028861	TRMT1	92	59.511	Saimiri_boliviensis_boliviensis
ENSGMOG00000006564	trmt1	99	61.228	ENSSHAG00000014381	TRMT1	94	61.189	Sarcophilus_harrisii
ENSGMOG00000006564	trmt1	100	70.035	ENSSFOG00015004139	trmt1	85	70.035	Scleropages_formosus
ENSGMOG00000006564	trmt1	99	73.345	ENSSMAG00000021136	trmt1	86	72.300	Scophthalmus_maximus
ENSGMOG00000006564	trmt1	99	74.868	ENSSDUG00000012740	trmt1	85	74.165	Seriola_dumerili
ENSGMOG00000006564	trmt1	99	74.692	ENSSLDG00000005971	trmt1	85	73.989	Seriola_lalandi_dorsalis
ENSGMOG00000006564	trmt1	88	65.234	ENSSARG00000005138	TRMT1	90	64.971	Sorex_araneus
ENSGMOG00000006564	trmt1	98	47.880	ENSSPUG00000001084	TRMT1	89	47.795	Sphenodon_punctatus
ENSGMOG00000006564	trmt1	99	72.759	ENSSPAG00000007153	trmt1	95	72.056	Stegastes_partitus
ENSGMOG00000006564	trmt1	98	61.646	ENSSSCG00000013744	TRMT1	90	61.228	Sus_scrofa
ENSGMOG00000006564	trmt1	96	71.454	ENSTRUG00000010700	trmt1	85	71.454	Takifugu_rubripes
ENSGMOG00000006564	trmt1	99	71.655	ENSTNIG00000018808	trmt1	98	71.127	Tetraodon_nigroviridis
ENSGMOG00000006564	trmt1	98	59.337	ENSTTRG00000006379	TRMT1	87	58.813	Tursiops_truncatus
ENSGMOG00000006564	trmt1	98	61.296	ENSUAMG00000022911	TRMT1	93	58.160	Ursus_americanus
ENSGMOG00000006564	trmt1	98	60.771	ENSUMAG00000006027	TRMT1	90	60.245	Ursus_maritimus
ENSGMOG00000006564	trmt1	98	61.431	ENSVVUG00000024177	TRMT1	87	60.908	Vulpes_vulpes
ENSGMOG00000006564	trmt1	80	63.696	ENSXETG00000033863	TRMT1	92	63.696	Xenopus_tropicalis
ENSGMOG00000006564	trmt1	99	74.074	ENSXCOG00000015733	trmt1	89	73.898	Xiphophorus_couchianus
ENSGMOG00000006564	trmt1	98	73.975	ENSXMAG00000013823	trmt1	97	73.975	Xiphophorus_maculatus