EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000006714 (Gene tree)
Gene ID: -
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 13272 bases
Position: chrGeneScaffold_2931:159390-172661
Accession: ZDB-GENE-050208-34
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000007166	SRRM_C	PF15230.6	1.2e-22	1	1
ENSGMOP00000007184	SRRM_C	PF15230.6	1.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000007388	-	1521	-	ENSGMOP00000007184	507 (aa)	-	UPI00023F0DAA
ENSGMOT00000007370	-	1443	-	ENSGMOP00000007166	481 (aa)	-	UPI00023F0DA9

Gene Model

Click here to download ENSGMOG00000006714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000006714's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000006714	srrm4	56	48.551	ENSACIG00000002171	srrm4	59	46.918	Amphilophus_citrinellus
ENSGMOG00000006714	srrm4	66	44.957	ENSATEG00000005330	srrm4	73	47.761	Anabas_testudineus
ENSGMOG00000006714	srrm4	56	50.174	ENSACLG00000023532	srrm4	64	46.926	Astatotilapia_calliptera
ENSGMOG00000006714	srrm4	69	61.176	ENSAMXG00000038719	srrm4	73	42.605	Astyanax_mexicanus
ENSGMOG00000006714	srrm4	74	43.939	ENSELUG00000004986	srrm4	68	43.553	Esox_lucius
ENSGMOG00000006714	srrm4	53	45.627	ENSFHEG00000005091	srrm4	71	50.680	Fundulus_heteroclitus
ENSGMOG00000006714	srrm4	84	49.652	ENSHBUG00000010505	srrm4	77	53.593	Haplochromis_burtoni
ENSGMOG00000006714	srrm4	63	53.106	ENSKMAG00000001873	srrm4	79	48.460	Kryptolebias_marmoratus
ENSGMOG00000006714	srrm4	57	72.941	ENSLBEG00000008471	srrm4	77	53.512	Labrus_bergylta
ENSGMOG00000006714	srrm4	56	50.174	ENSMZEG00005021733	srrm4	64	46.926	Maylandia_zebra
ENSGMOG00000006714	srrm4	90	50.638	ENSMALG00000001422	srrm4	80	52.258	Monopterus_albus
ENSGMOG00000006714	srrm4	56	51.273	ENSNBRG00000015313	srrm4	57	45.955	Neolamprologus_brichardi
ENSGMOG00000006714	srrm4	93	52.857	ENSONIG00000010552	srrm4	84	51.034	Oreochromis_niloticus
ENSGMOG00000006714	srrm4	82	50.922	ENSPFOG00000014600	srrm4	83	54.785	Poecilia_formosa
ENSGMOG00000006714	srrm4	56	51.636	ENSPNYG00000007785	srrm4	62	46.602	Pundamilia_nyererei
ENSGMOG00000006714	srrm4	51	45.098	ENSPNAG00000010426	srrm4	72	44.568	Pygocentrus_nattereri
ENSGMOG00000006714	srrm4	63	47.093	ENSSDUG00000017519	srrm4	77	45.387	Seriola_dumerili
ENSGMOG00000006714	srrm4	63	48.968	ENSSLDG00000015130	srrm4	82	42.711	Seriola_lalandi_dorsalis
ENSGMOG00000006714	srrm4	62	48.287	ENSSPAG00000016190	srrm4	83	47.000	Stegastes_partitus
ENSGMOG00000006714	srrm4	88	48.428	ENSXMAG00000002658	srrm4	52	53.012	Xiphophorus_maculatus