EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000006782 (Gene tree)
Gene ID: -
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 3703 bases
Position: chrGeneScaffold_3590:3357103-3360805
Accession: ZDB-GENE-040426-1856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000007223	zf-RNPHF	PF08080.12	7.2e-10	1	1
ENSGMOP00000007223	RRM_1	PF00076.22	5.3e-31	1	3
ENSGMOP00000007223	RRM_1	PF00076.22	5.3e-31	2	3
ENSGMOP00000007223	RRM_1	PF00076.22	5.3e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000007427	-	1209	-	ENSGMOP00000007223	403 (aa)	-	UPI00023F0EC2

Gene Model

Click here to download ENSGMOG00000006782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000006782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000006782	hnrnph1	97	58.871	ENSGMOG00000012413	hnrnph3	97	58.824
ENSGMOG00000006782	hnrnph1	85	46.875	ENSGMOG00000014047	grsf1	81	46.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000006782	hnrnph1	97	89.059	ENSAPOG00000016614	hnrnph1	96	89.059	Acanthochromis_polyacanthus
ENSGMOG00000006782	hnrnph1	98	88.636	ENSACIG00000008964	hnrnph1	99	88.636	Amphilophus_citrinellus
ENSGMOG00000006782	hnrnph1	97	89.059	ENSAOCG00000008372	hnrnph1	96	89.059	Amphiprion_ocellaris
ENSGMOG00000006782	hnrnph1	97	88.804	ENSAPEG00000012980	hnrnph1	96	88.804	Amphiprion_percula
ENSGMOG00000006782	hnrnph1	97	88.804	ENSATEG00000002792	hnrnph1	96	88.804	Anabas_testudineus
ENSGMOG00000006782	hnrnph1	88	76.533	ENSACAG00000016323	-	92	70.507	Anolis_carolinensis
ENSGMOG00000006782	hnrnph1	90	87.297	ENSACLG00000003313	hnrnph1	98	85.946	Astatotilapia_calliptera
ENSGMOG00000006782	hnrnph1	97	81.170	ENSAMXG00000030703	hnrnph1l	80	80.348	Astyanax_mexicanus
ENSGMOG00000006782	hnrnph1	98	80.952	ENSAMXG00000002483	hnrnph1	99	82.957	Astyanax_mexicanus
ENSGMOG00000006782	hnrnph1	97	85.751	ENSCSEG00000015891	hnrnph1	96	87.277	Cynoglossus_semilaevis
ENSGMOG00000006782	hnrnph1	97	87.786	ENSCVAG00000014097	hnrnph1	94	87.786	Cyprinodon_variegatus
ENSGMOG00000006782	hnrnph1	99	81.297	ENSDARG00000040881	hnrnph1	95	82.793	Danio_rerio
ENSGMOG00000006782	hnrnph1	97	80.407	ENSDARG00000005551	hnrnph1l	93	82.188	Danio_rerio
ENSGMOG00000006782	hnrnph1	97	80.556	ENSELUG00000021437	-	99	83.838	Esox_lucius
ENSGMOG00000006782	hnrnph1	97	85.250	ENSELUG00000006715	hnrnph1	96	85.000	Esox_lucius
ENSGMOG00000006782	hnrnph1	97	86.514	ENSFHEG00000008474	hnrnph1	93	86.514	Fundulus_heteroclitus
ENSGMOG00000006782	hnrnph1	97	88.804	ENSGAFG00000006280	hnrnph1	94	88.804	Gambusia_affinis
ENSGMOG00000006782	hnrnph1	99	82.892	ENSGACG00000018352	hnrnph1	99	83.373	Gasterosteus_aculeatus
ENSGMOG00000006782	hnrnph1	90	87.297	ENSHBUG00000010547	hnrnph1	99	85.946	Haplochromis_burtoni
ENSGMOG00000006782	hnrnph1	97	84.422	ENSHCOG00000004513	hnrnph1	92	84.673	Hippocampus_comes
ENSGMOG00000006782	hnrnph1	99	79.551	ENSIPUG00000024047	hnrnph1l	92	80.050	Ictalurus_punctatus
ENSGMOG00000006782	hnrnph1	92	80.376	ENSIPUG00000018262	hnrnph1	92	82.025	Ictalurus_punctatus
ENSGMOG00000006782	hnrnph1	98	86.869	ENSKMAG00000018802	hnrnph1	96	88.041	Kryptolebias_marmoratus
ENSGMOG00000006782	hnrnph1	97	88.295	ENSLBEG00000027811	hnrnph1	96	88.295	Labrus_bergylta
ENSGMOG00000006782	hnrnph1	97	79.661	ENSLOCG00000012510	hnrnph1	91	78.935	Lepisosteus_oculatus
ENSGMOG00000006782	hnrnph1	91	53.543	ENSMMUG00000017392	-	86	53.543	Macaca_mulatta
ENSGMOG00000006782	hnrnph1	91	53.543	ENSMNEG00000030544	-	86	53.543	Macaca_nemestrina
ENSGMOG00000006782	hnrnph1	89	86.898	ENSMAMG00000011478	hnrnph1	97	85.829	Mastacembelus_armatus
ENSGMOG00000006782	hnrnph1	97	88.804	ENSMZEG00005009791	hnrnph1	96	88.804	Maylandia_zebra
ENSGMOG00000006782	hnrnph1	99	86.967	ENSMMOG00000009064	hnrnph1	100	87.218	Mola_mola
ENSGMOG00000006782	hnrnph1	79	47.536	ENSMODG00000002200	-	99	47.093	Monodelphis_domestica
ENSGMOG00000006782	hnrnph1	89	89.373	ENSMALG00000003999	hnrnph1	99	88.283	Monopterus_albus
ENSGMOG00000006782	hnrnph1	90	87.297	ENSNBRG00000015406	hnrnph1	99	85.946	Neolamprologus_brichardi
ENSGMOG00000006782	hnrnph1	97	89.059	ENSONIG00000017754	hnrnph1	96	89.059	Oreochromis_niloticus
ENSGMOG00000006782	hnrnph1	97	90.585	ENSORLG00000006932	hnrnph1	96	89.822	Oryzias_latipes
ENSGMOG00000006782	hnrnph1	97	90.585	ENSORLG00020007881	hnrnph1	96	89.822	Oryzias_latipes_hni
ENSGMOG00000006782	hnrnph1	97	90.585	ENSORLG00015005306	hnrnph1	96	89.822	Oryzias_latipes_hsok
ENSGMOG00000006782	hnrnph1	98	88.579	ENSOMEG00000009827	hnrnph1	99	88.325	Oryzias_melastigma
ENSGMOG00000006782	hnrnph1	97	84.596	ENSPKIG00000018203	hnrnph1l	93	84.596	Paramormyrops_kingsleyae
ENSGMOG00000006782	hnrnph1	97	79.512	ENSPKIG00000009532	-	92	79.268	Paramormyrops_kingsleyae
ENSGMOG00000006782	hnrnph1	97	86.005	ENSPMGG00000012151	hnrnph1	96	86.514	Periophthalmus_magnuspinnatus
ENSGMOG00000006782	hnrnph1	100	87.715	ENSPFOG00000004097	hnrnph1	96	87.715	Poecilia_formosa
ENSGMOG00000006782	hnrnph1	97	88.804	ENSPLAG00000011771	hnrnph1	94	88.804	Poecilia_latipinna
ENSGMOG00000006782	hnrnph1	97	88.550	ENSPMEG00000019446	hnrnph1	94	88.550	Poecilia_mexicana
ENSGMOG00000006782	hnrnph1	97	89.059	ENSPREG00000005780	hnrnph1	94	89.059	Poecilia_reticulata
ENSGMOG00000006782	hnrnph1	97	88.804	ENSPNYG00000000204	hnrnph1	99	85.946	Pundamilia_nyererei
ENSGMOG00000006782	hnrnph1	98	82.500	ENSPNAG00000000439	hnrnph1	98	83.000	Pygocentrus_nattereri
ENSGMOG00000006782	hnrnph1	99	80.100	ENSPNAG00000002784	hnrnph1l	98	80.441	Pygocentrus_nattereri
ENSGMOG00000006782	hnrnph1	97	83.333	ENSSFOG00015016055	-	93	83.333	Scleropages_formosus
ENSGMOG00000006782	hnrnph1	97	85.606	ENSSFOG00015022796	hnrnph1l	100	82.707	Scleropages_formosus
ENSGMOG00000006782	hnrnph1	99	88.529	ENSSMAG00000007820	hnrnph1	98	88.529	Scophthalmus_maximus
ENSGMOG00000006782	hnrnph1	97	89.059	ENSSDUG00000008785	hnrnph1	96	89.059	Seriola_dumerili
ENSGMOG00000006782	hnrnph1	97	89.059	ENSSLDG00000010685	hnrnph1	96	89.059	Seriola_lalandi_dorsalis
ENSGMOG00000006782	hnrnph1	97	89.313	ENSSPAG00000009921	hnrnph1	96	89.313	Stegastes_partitus
ENSGMOG00000006782	hnrnph1	97	86.514	ENSTRUG00000020069	hnrnph1	96	87.786	Takifugu_rubripes
ENSGMOG00000006782	hnrnph1	96	73.171	ENSXETG00000018321	hnrnph1	83	76.882	Xenopus_tropicalis
ENSGMOG00000006782	hnrnph1	98	88.861	ENSXCOG00000009133	hnrnph1	99	86.275	Xiphophorus_couchianus
ENSGMOG00000006782	hnrnph1	99	88.945	ENSXMAG00000021332	hnrnph1	100	88.945	Xiphophorus_maculatus