EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000006903 (Gene tree)
Gene ID: -
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 15020 bases
Position: chrGeneScaffold_1770:354076-369095
Accession: ZDB-GENE-081031-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000007359	PUF	PF00806.19	3e-70	1	7
ENSGMOP00000007359	PUF	PF00806.19	3e-70	2	7
ENSGMOP00000007359	PUF	PF00806.19	3e-70	3	7
ENSGMOP00000007359	PUF	PF00806.19	3e-70	4	7
ENSGMOP00000007359	PUF	PF00806.19	3e-70	5	7
ENSGMOP00000007359	PUF	PF00806.19	3e-70	6	7
ENSGMOP00000007359	PUF	PF00806.19	3e-70	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000007568	-	3189	-	ENSGMOP00000007359	1063 (aa)	-	UPI00023F10D7

Gene Model

Click here to download ENSGMOG00000006903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000006903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000006903	pum2	100	74.013	ENSG00000055917	PUM2	100	79.412	Homo_sapiens
ENSGMOG00000006903	pum2	100	72.785	ENSAMEG00000002823	PUM2	100	71.717	Ailuropoda_melanoleuca
ENSGMOG00000006903	pum2	90	98.739	ENSACIG00000010646	pum2	99	93.958	Amphilophus_citrinellus
ENSGMOG00000006903	pum2	98	84.693	ENSAOCG00000016619	pum2	88	85.787	Amphiprion_ocellaris
ENSGMOG00000006903	pum2	100	87.142	ENSAPEG00000019924	pum2	90	87.604	Amphiprion_percula
ENSGMOG00000006903	pum2	100	86.679	ENSATEG00000015030	pum2	90	87.049	Anabas_testudineus
ENSGMOG00000006903	pum2	100	73.070	ENSAPLG00000010496	PUM2	90	71.021	Anas_platyrhynchos
ENSGMOG00000006903	pum2	100	73.346	ENSACAG00000010491	PUM2	100	70.588	Anolis_carolinensis
ENSGMOG00000006903	pum2	100	73.370	ENSANAG00000021807	PUM2	100	71.193	Aotus_nancymaae
ENSGMOG00000006903	pum2	100	86.322	ENSACLG00000022532	pum2	89	86.969	Astatotilapia_calliptera
ENSGMOG00000006903	pum2	100	72.869	ENSBTAG00000011155	PUM2	100	76.124	Bos_taurus
ENSGMOG00000006903	pum2	100	73.278	ENSCJAG00000007450	PUM2	100	71.101	Callithrix_jacchus
ENSGMOG00000006903	pum2	100	72.961	ENSCAFG00000003839	PUM2	100	71.507	Canis_familiaris
ENSGMOG00000006903	pum2	100	72.752	ENSCAFG00020025689	PUM2	100	70.588	Canis_lupus_dingo
ENSGMOG00000006903	pum2	100	72.869	ENSCHIG00000022180	PUM2	100	71.415	Capra_hircus
ENSGMOG00000006903	pum2	100	72.294	ENSTSYG00000014463	PUM2	100	71.507	Carlito_syrichta
ENSGMOG00000006903	pum2	92	87.349	ENSCAPG00000016888	PUM2	100	85.201	Cavia_aperea
ENSGMOG00000006903	pum2	100	73.651	ENSCPOG00000031996	PUM2	100	70.631	Cavia_porcellus
ENSGMOG00000006903	pum2	100	73.370	ENSCCAG00000037035	PUM2	100	71.193	Cebus_capucinus
ENSGMOG00000006903	pum2	100	73.462	ENSCATG00000043826	PUM2	100	71.284	Cercocebus_atys
ENSGMOG00000006903	pum2	100	74.060	ENSCLAG00000006048	PUM2	100	71.219	Chinchilla_lanigera
ENSGMOG00000006903	pum2	100	73.462	ENSCSAG00000008087	PUM2	100	71.284	Chlorocebus_sabaeus
ENSGMOG00000006903	pum2	70	74.138	ENSCHOG00000004575	PUM2	79	74.138	Choloepus_hoffmanni
ENSGMOG00000006903	pum2	90	90.511	ENSCPBG00000019966	PUM2	99	90.511	Chrysemys_picta_bellii
ENSGMOG00000006903	pum2	100	73.462	ENSCANG00000032797	PUM2	100	71.284	Colobus_angolensis_palliatus
ENSGMOG00000006903	pum2	100	73.095	ENSCGRG00001025023	Pum2	100	71.101	Cricetulus_griseus_chok1gshd
ENSGMOG00000006903	pum2	100	73.370	ENSCGRG00000001580	Pum2	100	71.284	Cricetulus_griseus_crigri
ENSGMOG00000006903	pum2	100	86.469	ENSCSEG00000020899	pum2	90	86.469	Cynoglossus_semilaevis
ENSGMOG00000006903	pum2	100	86.481	ENSCVAG00000002426	pum2	100	84.665	Cyprinodon_variegatus
ENSGMOG00000006903	pum2	100	83.272	ENSDARG00000061040	pum2	90	83.179	Danio_rerio
ENSGMOG00000006903	pum2	100	68.440	ENSDORG00000011453	Pum2	100	67.094	Dipodomys_ordii
ENSGMOG00000006903	pum2	80	91.103	ENSETEG00000017683	PUM2	79	91.103	Echinops_telfairi
ENSGMOG00000006903	pum2	69	59.726	ENSEBUG00000014828	pum2	93	58.065	Eptatretus_burgeri
ENSGMOG00000006903	pum2	95	58.999	ENSEBUG00000004435	pum2	96	57.834	Eptatretus_burgeri
ENSGMOG00000006903	pum2	100	72.961	ENSEASG00005009429	PUM2	100	71.415	Equus_asinus_asinus
ENSGMOG00000006903	pum2	100	72.961	ENSECAG00000021930	PUM2	100	75.969	Equus_caballus
ENSGMOG00000006903	pum2	75	71.698	ENSEEUG00000003224	-	74	71.698	Erinaceus_europaeus
ENSGMOG00000006903	pum2	100	85.110	ENSELUG00000014997	pum2	90	85.202	Esox_lucius
ENSGMOG00000006903	pum2	100	72.869	ENSFCAG00000027520	PUM2	100	71.415	Felis_catus
ENSGMOG00000006903	pum2	100	73.529	ENSFALG00000001759	PUM2	100	71.481	Ficedula_albicollis
ENSGMOG00000006903	pum2	100	73.102	ENSFDAG00000019685	PUM2	100	70.540	Fukomys_damarensis
ENSGMOG00000006903	pum2	100	84.248	ENSFHEG00000021596	pum2	84	82.628	Fundulus_heteroclitus
ENSGMOG00000006903	pum2	89	90.754	ENSGALG00000016481	PUM2	92	90.754	Gallus_gallus
ENSGMOG00000006903	pum2	100	86.216	ENSGAFG00000013691	pum2	90	86.309	Gambusia_affinis
ENSGMOG00000006903	pum2	100	88.355	ENSGACG00000009670	pum2	100	88.632	Gasterosteus_aculeatus
ENSGMOG00000006903	pum2	100	73.162	ENSGAGG00000020698	PUM2	100	71.297	Gopherus_agassizii
ENSGMOG00000006903	pum2	100	73.370	ENSGGOG00000011374	PUM2	100	71.193	Gorilla_gorilla
ENSGMOG00000006903	pum2	95	94.093	ENSHBUG00000016453	pum2	90	80.921	Haplochromis_burtoni
ENSGMOG00000006903	pum2	100	73.370	ENSHGLG00000007892	PUM2	100	71.166	Heterocephalus_glaber_female
ENSGMOG00000006903	pum2	100	73.394	ENSHGLG00100015510	PUM2	100	72.018	Heterocephalus_glaber_male
ENSGMOG00000006903	pum2	100	86.309	ENSHCOG00000010119	pum2	90	86.864	Hippocampus_comes
ENSGMOG00000006903	pum2	100	72.886	ENSSTOG00000006262	PUM2	100	71.534	Ictidomys_tridecemlineatus
ENSGMOG00000006903	pum2	100	73.993	ENSJJAG00000020969	Pum2	100	71.245	Jaculus_jaculus
ENSGMOG00000006903	pum2	100	86.111	ENSKMAG00000017216	pum2	90	85.741	Kryptolebias_marmoratus
ENSGMOG00000006903	pum2	100	88.394	ENSLBEG00000020488	pum2	90	88.022	Labrus_bergylta
ENSGMOG00000006903	pum2	100	73.144	ENSLACG00000008723	PUM2	89	73.077	Latimeria_chalumnae
ENSGMOG00000006903	pum2	100	75.686	ENSLOCG00000017196	pum2	89	74.908	Lepisosteus_oculatus
ENSGMOG00000006903	pum2	100	72.719	ENSLAFG00000009278	PUM2	100	70.631	Loxodonta_africana
ENSGMOG00000006903	pum2	100	73.462	ENSMFAG00000000492	PUM2	100	71.284	Macaca_fascicularis
ENSGMOG00000006903	pum2	100	73.462	ENSMMUG00000023181	PUM2	100	71.284	Macaca_mulatta
ENSGMOG00000006903	pum2	100	73.462	ENSMNEG00000039659	PUM2	100	71.284	Macaca_nemestrina
ENSGMOG00000006903	pum2	100	73.462	ENSMLEG00000039243	PUM2	100	71.284	Mandrillus_leucophaeus
ENSGMOG00000006903	pum2	100	87.025	ENSMAMG00000006121	pum2	90	86.654	Mastacembelus_armatus
ENSGMOG00000006903	pum2	100	86.137	ENSMZEG00005000791	pum2	89	86.784	Maylandia_zebra
ENSGMOG00000006903	pum2	100	73.162	ENSMGAG00000014040	PUM2	100	71.113	Meleagris_gallopavo
ENSGMOG00000006903	pum2	100	73.462	ENSMAUG00000000311	Pum2	100	71.376	Mesocricetus_auratus
ENSGMOG00000006903	pum2	100	73.186	ENSMICG00000011647	PUM2	100	71.193	Microcebus_murinus
ENSGMOG00000006903	pum2	100	73.394	ENSMOCG00000013663	Pum2	100	71.599	Microtus_ochrogaster
ENSGMOG00000006903	pum2	100	83.608	ENSMMOG00000002975	pum2	100	84.876	Mola_mola
ENSGMOG00000006903	pum2	100	73.833	MGP_CAROLIEiJ_G0017603	Pum2	99	75.665	Mus_caroli
ENSGMOG00000006903	pum2	100	73.564	ENSMUSG00000020594	Pum2	98	75.285	Mus_musculus
ENSGMOG00000006903	pum2	100	73.211	MGP_PahariEiJ_G0029361	Pum2	99	75.665	Mus_pahari
ENSGMOG00000006903	pum2	100	73.655	MGP_SPRETEiJ_G0018447	Pum2	99	75.285	Mus_spretus
ENSGMOG00000006903	pum2	100	73.052	ENSMPUG00000013734	PUM2	100	71.599	Mustela_putorius_furo
ENSGMOG00000006903	pum2	100	72.736	ENSMLUG00000007362	PUM2	100	71.376	Myotis_lucifugus
ENSGMOG00000006903	pum2	100	74.288	ENSNGAG00000016665	-	100	72.376	Nannospalax_galili
ENSGMOG00000006903	pum2	99	51.963	ENSNGAG00000016239	-	95	56.211	Nannospalax_galili
ENSGMOG00000006903	pum2	100	73.370	ENSNLEG00000002509	PUM2	100	71.193	Nomascus_leucogenys
ENSGMOG00000006903	pum2	94	69.891	ENSMEUG00000016567	PUM2	100	63.919	Notamacropus_eugenii
ENSGMOG00000006903	pum2	70	84.375	ENSOPRG00000001963	PUM2	93	56.856	Ochotona_princeps
ENSGMOG00000006903	pum2	100	73.877	ENSODEG00000007823	PUM2	100	71.324	Octodon_degus
ENSGMOG00000006903	pum2	100	86.414	ENSONIG00000006119	pum2	90	86.969	Oreochromis_niloticus
ENSGMOG00000006903	pum2	100	72.477	ENSOCUG00000017908	PUM2	100	71.219	Oryctolagus_cuniculus
ENSGMOG00000006903	pum2	100	84.323	ENSORLG00000012611	pum2	90	85.529	Oryzias_latipes
ENSGMOG00000006903	pum2	100	84.323	ENSORLG00020014452	pum2	90	85.529	Oryzias_latipes_hni
ENSGMOG00000006903	pum2	100	84.230	ENSORLG00015009427	pum2	90	85.436	Oryzias_latipes_hsok
ENSGMOG00000006903	pum2	100	72.869	ENSOARG00000017236	PUM2	100	71.415	Ovis_aries
ENSGMOG00000006903	pum2	100	73.370	ENSPPAG00000023095	PUM2	100	71.193	Pan_paniscus
ENSGMOG00000006903	pum2	100	72.869	ENSPPRG00000021443	PUM2	100	71.415	Panthera_pardus
ENSGMOG00000006903	pum2	100	72.869	ENSPTIG00000018982	PUM2	100	71.415	Panthera_tigris_altaica
ENSGMOG00000006903	pum2	100	73.370	ENSPTRG00000011692	PUM2	100	71.193	Pan_troglodytes
ENSGMOG00000006903	pum2	100	62.863	ENSPANG00000009393	PUM2	100	87.324	Papio_anubis
ENSGMOG00000006903	pum2	100	73.621	ENSPSIG00000011626	PUM2	88	71.573	Pelodiscus_sinensis
ENSGMOG00000006903	pum2	100	73.254	ENSPEMG00000008357	Pum2	100	71.258	Peromyscus_maniculatus_bairdii
ENSGMOG00000006903	pum2	100	84.525	ENSPFOG00000019208	pum2	90	84.615	Poecilia_formosa
ENSGMOG00000006903	pum2	100	86.309	ENSPLAG00000001826	pum2	90	86.401	Poecilia_latipinna
ENSGMOG00000006903	pum2	100	86.401	ENSPMEG00000015766	pum2	90	86.494	Poecilia_mexicana
ENSGMOG00000006903	pum2	100	73.462	ENSPPYG00000012617	PUM2	100	71.376	Pongo_abelii
ENSGMOG00000006903	pum2	62	89.130	ENSPCAG00000008001	PUM2	70	89.130	Procavia_capensis
ENSGMOG00000006903	pum2	99	73.209	ENSPCOG00000019636	PUM2	100	71.190	Propithecus_coquereli
ENSGMOG00000006903	pum2	98	67.784	ENSPVAG00000002920	PUM2	100	66.293	Pteropus_vampyrus
ENSGMOG00000006903	pum2	100	86.322	ENSPNYG00000022901	pum2	89	86.969	Pundamilia_nyererei
ENSGMOG00000006903	pum2	98	83.477	ENSPNAG00000008025	pum2	89	83.381	Pygocentrus_nattereri
ENSGMOG00000006903	pum2	100	71.651	ENSRNOG00000006180	Pum2	100	70.669	Rattus_norvegicus
ENSGMOG00000006903	pum2	100	73.462	ENSRBIG00000044880	PUM2	100	71.284	Rhinopithecus_bieti
ENSGMOG00000006903	pum2	100	73.881	ENSSBOG00000022007	PUM2	100	71.127	Saimiri_boliviensis_boliviensis
ENSGMOG00000006903	pum2	100	86.611	ENSSMAG00000018236	pum2	90	86.704	Scophthalmus_maximus
ENSGMOG00000006903	pum2	95	81.958	ENSSDUG00000001800	pum2	88	86.728	Seriola_dumerili
ENSGMOG00000006903	pum2	100	87.789	ENSSLDG00000000981	pum2	90	87.512	Seriola_lalandi_dorsalis
ENSGMOG00000006903	pum2	96	63.263	ENSSARG00000010992	PUM2	86	61.624	Sorex_araneus
ENSGMOG00000006903	pum2	99	73.840	ENSSPUG00000017012	PUM2	99	70.752	Sphenodon_punctatus
ENSGMOG00000006903	pum2	100	87.234	ENSSPAG00000022948	pum2	90	87.419	Stegastes_partitus
ENSGMOG00000006903	pum2	100	73.162	ENSSSCG00000008600	PUM2	100	77.259	Sus_scrofa
ENSGMOG00000006903	pum2	100	73.346	ENSTGUG00000013149	PUM2	100	71.297	Taeniopygia_guttata
ENSGMOG00000006903	pum2	100	82.407	ENSTRUG00000018167	pum2	90	81.667	Takifugu_rubripes
ENSGMOG00000006903	pum2	100	84.288	ENSTNIG00000003116	pum2	90	84.658	Tetraodon_nigroviridis
ENSGMOG00000006903	pum2	78	88.889	ENSTBEG00000008729	PUM2	82	85.773	Tupaia_belangeri
ENSGMOG00000006903	pum2	100	72.686	ENSTTRG00000004887	PUM2	100	71.507	Tursiops_truncatus
ENSGMOG00000006903	pum2	71	77.349	ENSUAMG00000008120	PUM2	98	75.065	Ursus_americanus
ENSGMOG00000006903	pum2	100	73.052	ENSUMAG00000023198	PUM2	100	71.599	Ursus_maritimus
ENSGMOG00000006903	pum2	100	72.360	ENSVPAG00000005056	PUM2	100	71.665	Vicugna_pacos
ENSGMOG00000006903	pum2	100	73.052	ENSVVUG00000014829	PUM2	100	71.599	Vulpes_vulpes
ENSGMOG00000006903	pum2	100	70.018	ENSXETG00000008903	pum2	90	68.537	Xenopus_tropicalis
ENSGMOG00000006903	pum2	90	85.685	ENSXCOG00000002556	pum2	88	85.376	Xiphophorus_couchianus
ENSGMOG00000006903	pum2	100	86.494	ENSXMAG00000017682	pum2	90	86.216	Xiphophorus_maculatus