EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000007140 (Gene tree)
Gene ID: -
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: RAB34%2C member RAS oncogene family b
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 2503 bases
Position: chrGeneScaffold_4258:385655-388157
Accession: ZDB-GENE-091118-61
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000007601	MMR_HSR1	PF01926.23	4.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000007819	-	621	-	ENSGMOP00000007601	206 (aa)	-	UPI00023F0DC8

Gene Model

Click here to download ENSGMOG00000007140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000007140's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000007140	rab34b	80	35.542	ENSGMOG00000008450	-	76	35.542
ENSGMOG00000007140	rab34b	78	38.509	ENSGMOG00000004979	-	73	38.509
ENSGMOG00000007140	rab34b	56	37.391	ENSGMOG00000006450	rab11al	56	37.391
ENSGMOG00000007140	rab34b	57	38.462	ENSGMOG00000007390	rab11ba	53	38.462
ENSGMOG00000007140	rab34b	81	36.527	ENSGMOG00000003610	rab15	77	36.527
ENSGMOG00000007140	rab34b	84	31.792	ENSGMOG00000018741	-	77	31.792
ENSGMOG00000007140	rab34b	78	38.037	ENSGMOG00000004095	rab41	75	38.037
ENSGMOG00000007140	rab34b	78	32.500	ENSGMOG00000015096	rab5c	71	32.500
ENSGMOG00000007140	rab34b	80	35.542	ENSGMOG00000010808	RAB39B	77	35.542
ENSGMOG00000007140	rab34b	72	38.255	ENSGMOG00000011766	-	94	38.255
ENSGMOG00000007140	rab34b	99	32.381	ENSGMOG00000020194	rab9b	97	32.381
ENSGMOG00000007140	rab34b	97	32.512	ENSGMOG00000006175	rab33a	84	32.512
ENSGMOG00000007140	rab34b	88	59.341	ENSGMOG00000014481	rab36	95	59.341
ENSGMOG00000007140	rab34b	77	36.025	ENSGMOG00000012335	rab12	66	36.025
ENSGMOG00000007140	rab34b	98	31.188	ENSGMOG00000002868	rab5aa	89	31.188
ENSGMOG00000007140	rab34b	59	36.641	ENSGMOG00000018475	RAB29	75	36.641
ENSGMOG00000007140	rab34b	79	37.952	ENSGMOG00000011665	zgc:101559	78	37.952
ENSGMOG00000007140	rab34b	79	37.126	ENSGMOG00000000885	rab33ba	77	37.126
ENSGMOG00000007140	rab34b	58	33.607	ENSGMOG00000020148	-	64	33.607
ENSGMOG00000007140	rab34b	78	37.725	ENSGMOG00000010022	-	78	37.725
ENSGMOG00000007140	rab34b	81	35.928	ENSGMOG00000000532	-	76	35.928
ENSGMOG00000007140	rab34b	58	36.975	ENSGMOG00000007127	RAB5A	64	36.975
ENSGMOG00000007140	rab34b	57	37.288	ENSGMOG00000019073	-	56	37.288
ENSGMOG00000007140	rab34b	59	39.669	ENSGMOG00000006444	rab25b	71	39.669
ENSGMOG00000007140	rab34b	84	30.508	ENSGMOG00000007712	RAB7A	84	30.508
ENSGMOG00000007140	rab34b	78	38.125	ENSGMOG00000002552	rab30	77	38.125
ENSGMOG00000007140	rab34b	78	35.625	ENSGMOG00000001834	rab4b	75	35.625
ENSGMOG00000007140	rab34b	72	36.242	ENSGMOG00000005102	rab23	66	38.750
ENSGMOG00000007140	rab34b	78	38.509	ENSGMOG00000004888	rab1ab	80	38.509
ENSGMOG00000007140	rab34b	77	32.704	ENSGMOG00000001876	-	90	32.704
ENSGMOG00000007140	rab34b	100	66.029	ENSGMOG00000016238	rab34a	79	66.029
ENSGMOG00000007140	rab34b	58	38.655	ENSGMOG00000003577	-	59	38.655
ENSGMOG00000007140	rab34b	79	33.951	ENSGMOG00000017644	si:ch211-247i17.1	92	33.951
ENSGMOG00000007140	rab34b	85	35.714	ENSGMOG00000016277	RAB15	84	35.714
ENSGMOG00000007140	rab34b	90	36.170	ENSGMOG00000017688	rab35b	96	35.294
ENSGMOG00000007140	rab34b	52	41.284	ENSGMOG00000015174	si:dkey-16l2.16	66	41.284
ENSGMOG00000007140	rab34b	78	38.509	ENSGMOG00000007293	rab1ba	78	38.509
ENSGMOG00000007140	rab34b	78	33.125	ENSGMOG00000006968	-	78	33.125
ENSGMOG00000007140	rab34b	98	30.952	ENSGMOG00000009668	-	93	30.952
ENSGMOG00000007140	rab34b	57	38.462	ENSGMOG00000009211	rab11bb	53	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000007140	rab34b	95	83.673	ENSAPOG00000019147	rab34b	72	87.333	Acanthochromis_polyacanthus
ENSGMOG00000007140	rab34b	98	75.248	ENSACIG00000004859	rab34b	83	75.248	Amphilophus_citrinellus
ENSGMOG00000007140	rab34b	99	82.353	ENSAOCG00000007106	rab34b	74	82.353	Amphiprion_ocellaris
ENSGMOG00000007140	rab34b	96	83.838	ENSAPEG00000018607	rab34b	73	83.251	Amphiprion_percula
ENSGMOG00000007140	rab34b	100	77.778	ENSATEG00000006851	rab34b	81	77.778	Anabas_testudineus
ENSGMOG00000007140	rab34b	100	84.058	ENSACLG00000005733	rab34b	78	84.058	Astatotilapia_calliptera
ENSGMOG00000007140	rab34b	100	71.359	ENSAMXG00000006018	rab34b	80	71.359	Astyanax_mexicanus
ENSGMOG00000007140	rab34b	91	79.365	ENSCSEG00000018133	rab34b	75	79.365	Cynoglossus_semilaevis
ENSGMOG00000007140	rab34b	100	70.874	ENSDARG00000010977	rab34b	81	70.874	Danio_rerio
ENSGMOG00000007140	rab34b	100	77.885	ENSELUG00000005597	rab34b	81	77.885	Esox_lucius
ENSGMOG00000007140	rab34b	100	79.327	ENSFHEG00000004532	rab34b	81	79.327	Fundulus_heteroclitus
ENSGMOG00000007140	rab34b	100	81.250	ENSGACG00000020514	rab34b	81	81.250	Gasterosteus_aculeatus
ENSGMOG00000007140	rab34b	100	71.014	ENSIPUG00000024531	rab34	81	71.014	Ictalurus_punctatus
ENSGMOG00000007140	rab34b	100	79.710	ENSKMAG00000019341	rab34b	82	79.710	Kryptolebias_marmoratus
ENSGMOG00000007140	rab34b	100	80.583	ENSLBEG00000027819	rab34b	75	90.000	Labrus_bergylta
ENSGMOG00000007140	rab34b	100	80.769	ENSMAMG00000020214	rab34b	81	80.769	Mastacembelus_armatus
ENSGMOG00000007140	rab34b	100	78.641	ENSMMOG00000010936	rab34b	70	78.641	Mola_mola
ENSGMOG00000007140	rab34b	91	80.952	ENSMALG00000018499	rab34b	71	80.952	Monopterus_albus
ENSGMOG00000007140	rab34b	100	84.058	ENSONIG00000005519	rab34b	81	84.058	Oreochromis_niloticus
ENSGMOG00000007140	rab34b	100	79.612	ENSORLG00000003119	rab34b	75	79.612	Oryzias_latipes
ENSGMOG00000007140	rab34b	100	80.097	ENSORLG00020016139	rab34b	75	80.097	Oryzias_latipes_hni
ENSGMOG00000007140	rab34b	100	80.097	ENSORLG00015000584	rab34b	75	80.097	Oryzias_latipes_hsok
ENSGMOG00000007140	rab34b	100	80.097	ENSOMEG00000010334	rab34b	83	80.097	Oryzias_melastigma
ENSGMOG00000007140	rab34b	100	67.788	ENSPKIG00000013326	rab34b	81	67.788	Paramormyrops_kingsleyae
ENSGMOG00000007140	rab34b	100	79.808	ENSPMGG00000021697	rab34b	81	79.808	Periophthalmus_magnuspinnatus
ENSGMOG00000007140	rab34b	100	81.159	ENSPFOG00000011444	rab34b	81	81.159	Poecilia_formosa
ENSGMOG00000007140	rab34b	100	81.159	ENSPLAG00000005074	rab34b	81	81.159	Poecilia_latipinna
ENSGMOG00000007140	rab34b	100	81.159	ENSPMEG00000013297	rab34b	81	81.159	Poecilia_mexicana
ENSGMOG00000007140	rab34b	100	80.676	ENSPREG00000009813	rab34b	81	80.676	Poecilia_reticulata
ENSGMOG00000007140	rab34b	100	82.524	ENSPNYG00000017153	rab34b	85	88.889	Pundamilia_nyererei
ENSGMOG00000007140	rab34b	100	71.154	ENSPNAG00000015040	rab34b	87	71.154	Pygocentrus_nattereri
ENSGMOG00000007140	rab34b	100	68.900	ENSSFOG00015005188	rab34	81	68.900	Scleropages_formosus
ENSGMOG00000007140	rab34b	100	79.612	ENSSMAG00000019926	rab34b	88	79.612	Scophthalmus_maximus
ENSGMOG00000007140	rab34b	100	83.173	ENSSDUG00000016760	rab34b	65	83.173	Seriola_dumerili
ENSGMOG00000007140	rab34b	74	90.850	ENSSLDG00000014812	rab34b	75	90.850	Seriola_lalandi_dorsalis
ENSGMOG00000007140	rab34b	100	81.250	ENSSPAG00000002801	rab34b	81	81.250	Stegastes_partitus
ENSGMOG00000007140	rab34b	95	81.122	ENSTRUG00000014481	rab34b	79	81.122	Takifugu_rubripes
ENSGMOG00000007140	rab34b	99	79.710	ENSTNIG00000016158	rab34b	80	79.710	Tetraodon_nigroviridis