EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000007350 (Gene tree)
Gene ID: -
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 29215 bases
Position: chrGeneScaffold_3655:780159-809373
Accession: ZDB-GENE-070112-1412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000007853	SHQ1	PF04925.15	1.3e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000008082	-	1167	-	ENSGMOP00000007853	388 (aa)	-	UPI00023F181E

Gene Model

Click here to download ENSGMOG00000007350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000007350's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000007350	shq1	100	59.000	ENSG00000144736	SHQ1	100	66.000	Homo_sapiens
ENSGMOG00000007350	shq1	100	75.321	ENSAPOG00000000397	shq1	64	76.093	Acanthochromis_polyacanthus
ENSGMOG00000007350	shq1	100	58.690	ENSAMEG00000015140	SHQ1	69	58.942	Ailuropoda_melanoleuca
ENSGMOG00000007350	shq1	100	75.515	ENSACIG00000021249	shq1	64	75.773	Amphilophus_citrinellus
ENSGMOG00000007350	shq1	100	75.835	ENSAOCG00000023311	shq1	63	76.607	Amphiprion_ocellaris
ENSGMOG00000007350	shq1	100	75.578	ENSAPEG00000021686	shq1	64	76.350	Amphiprion_percula
ENSGMOG00000007350	shq1	100	76.215	ENSATEG00000008475	shq1	64	76.093	Anabas_testudineus
ENSGMOG00000007350	shq1	100	59.045	ENSAPLG00000013926	SHQ1	78	58.291	Anas_platyrhynchos
ENSGMOG00000007350	shq1	100	60.050	ENSACAG00000014809	SHQ1	59	60.050	Anolis_carolinensis
ENSGMOG00000007350	shq1	97	43.158	ENSANAG00000030500	-	66	42.408	Aotus_nancymaae
ENSGMOG00000007350	shq1	100	58.250	ENSANAG00000029241	SHQ1	69	58.040	Aotus_nancymaae
ENSGMOG00000007350	shq1	100	75.578	ENSACLG00000023077	shq1	62	76.093	Astatotilapia_calliptera
ENSGMOG00000007350	shq1	95	65.591	ENSAMXG00000043822	shq1	65	66.129	Astyanax_mexicanus
ENSGMOG00000007350	shq1	100	58.690	ENSBTAG00000005436	SHQ1	68	58.438	Bos_taurus
ENSGMOG00000007350	shq1	99	31.566	WBGene00021655	Y48A5A.1	88	31.841	Caenorhabditis_elegans
ENSGMOG00000007350	shq1	100	58.000	ENSCJAG00000015131	SHQ1	68	57.789	Callithrix_jacchus
ENSGMOG00000007350	shq1	100	58.438	ENSCAFG00000006434	SHQ1	68	58.942	Canis_familiaris
ENSGMOG00000007350	shq1	100	58.690	ENSCAFG00020016743	SHQ1	68	59.194	Canis_lupus_dingo
ENSGMOG00000007350	shq1	100	58.690	ENSCHIG00000012271	SHQ1	62	58.690	Capra_hircus
ENSGMOG00000007350	shq1	100	56.927	ENSTSYG00000014439	SHQ1	69	56.675	Carlito_syrichta
ENSGMOG00000007350	shq1	88	51.176	ENSCAPG00000009343	SHQ1	52	73.171	Cavia_aperea
ENSGMOG00000007350	shq1	100	57.828	ENSCPOG00000011443	SHQ1	68	57.828	Cavia_porcellus
ENSGMOG00000007350	shq1	99	44.301	ENSCCAG00000036087	-	67	44.301	Cebus_capucinus
ENSGMOG00000007350	shq1	100	49.373	ENSCCAG00000027080	SHQ1	66	49.373	Cebus_capucinus
ENSGMOG00000007350	shq1	100	60.050	ENSCATG00000041238	SHQ1	68	60.050	Cercocebus_atys
ENSGMOG00000007350	shq1	100	58.438	ENSCLAG00000004206	SHQ1	69	58.438	Chinchilla_lanigera
ENSGMOG00000007350	shq1	77	57.605	ENSCSAG00000011514	SHQ1	63	57.605	Chlorocebus_sabaeus
ENSGMOG00000007350	shq1	87	46.667	ENSCHOG00000003273	-	100	45.954	Choloepus_hoffmanni
ENSGMOG00000007350	shq1	100	57.789	ENSCPBG00000006441	SHQ1	65	58.543	Chrysemys_picta_bellii
ENSGMOG00000007350	shq1	100	42.105	ENSCING00000008013	-	85	42.105	Ciona_intestinalis
ENSGMOG00000007350	shq1	100	40.513	ENSCSAVG00000002332	-	88	40.513	Ciona_savignyi
ENSGMOG00000007350	shq1	100	59.548	ENSCANG00000039295	SHQ1	69	59.548	Colobus_angolensis_palliatus
ENSGMOG00000007350	shq1	100	57.935	ENSCGRG00001012583	Shq1	58	70.732	Cricetulus_griseus_chok1gshd
ENSGMOG00000007350	shq1	100	57.935	ENSCGRG00000009849	Shq1	58	70.732	Cricetulus_griseus_crigri
ENSGMOG00000007350	shq1	100	74.742	ENSCSEG00000007829	shq1	63	74.742	Cynoglossus_semilaevis
ENSGMOG00000007350	shq1	100	72.634	ENSCVAG00000020049	shq1	67	72.751	Cyprinodon_variegatus
ENSGMOG00000007350	shq1	100	66.324	ENSDARG00000058522	shq1	66	66.324	Danio_rerio
ENSGMOG00000007350	shq1	100	58.438	ENSDNOG00000033937	SHQ1	69	58.438	Dasypus_novemcinctus
ENSGMOG00000007350	shq1	100	49.874	ENSETEG00000005766	SHQ1	69	49.874	Echinops_telfairi
ENSGMOG00000007350	shq1	77	51.325	ENSEBUG00000005445	shq1	68	50.993	Eptatretus_burgeri
ENSGMOG00000007350	shq1	100	59.446	ENSEASG00005002237	SHQ1	69	59.446	Equus_asinus_asinus
ENSGMOG00000007350	shq1	100	59.950	ENSECAG00000015673	SHQ1	67	59.950	Equus_caballus
ENSGMOG00000007350	shq1	100	57.431	ENSEEUG00000010568	SHQ1	69	57.935	Erinaceus_europaeus
ENSGMOG00000007350	shq1	100	72.165	ENSELUG00000003476	shq1	81	67.368	Esox_lucius
ENSGMOG00000007350	shq1	100	59.194	ENSFCAG00000012781	SHQ1	69	59.194	Felis_catus
ENSGMOG00000007350	shq1	100	62.814	ENSFALG00000013428	SHQ1	64	62.563	Ficedula_albicollis
ENSGMOG00000007350	shq1	100	57.683	ENSFDAG00000005595	SHQ1	61	57.683	Fukomys_damarensis
ENSGMOG00000007350	shq1	100	72.564	ENSFHEG00000017552	shq1	67	72.051	Fundulus_heteroclitus
ENSGMOG00000007350	shq1	100	60.606	ENSGALG00000007798	SHQ1	64	60.101	Gallus_gallus
ENSGMOG00000007350	shq1	100	71.649	ENSGACG00000011797	shq1	100	71.649	Gasterosteus_aculeatus
ENSGMOG00000007350	shq1	100	58.794	ENSGGOG00000034818	SHQ1	68	58.543	Gorilla_gorilla
ENSGMOG00000007350	shq1	100	75.321	ENSHBUG00000010857	shq1	65	75.835	Haplochromis_burtoni
ENSGMOG00000007350	shq1	100	57.431	ENSHGLG00000003637	SHQ1	61	57.431	Heterocephalus_glaber_female
ENSGMOG00000007350	shq1	100	57.431	ENSHGLG00100011957	SHQ1	62	57.431	Heterocephalus_glaber_male
ENSGMOG00000007350	shq1	100	70.361	ENSHCOG00000010799	shq1	66	70.619	Hippocampus_comes
ENSGMOG00000007350	shq1	100	66.154	ENSIPUG00000001247	shq1	67	66.667	Ictalurus_punctatus
ENSGMOG00000007350	shq1	100	58.690	ENSSTOG00000010043	SHQ1	72	58.690	Ictidomys_tridecemlineatus
ENSGMOG00000007350	shq1	100	58.438	ENSJJAG00000017611	Shq1	57	73.171	Jaculus_jaculus
ENSGMOG00000007350	shq1	100	74.359	ENSKMAG00000004457	shq1	66	74.103	Kryptolebias_marmoratus
ENSGMOG00000007350	shq1	100	60.705	ENSLACG00000014243	SHQ1	60	60.453	Latimeria_chalumnae
ENSGMOG00000007350	shq1	100	65.829	ENSLOCG00000009970	shq1	69	65.239	Lepisosteus_oculatus
ENSGMOG00000007350	shq1	100	59.799	ENSMFAG00000039148	SHQ1	68	59.799	Macaca_fascicularis
ENSGMOG00000007350	shq1	100	40.816	ENSMFAG00000037396	-	65	40.816	Macaca_fascicularis
ENSGMOG00000007350	shq1	100	40.816	ENSMMUG00000021761	-	65	40.816	Macaca_mulatta
ENSGMOG00000007350	shq1	88	58.571	ENSMMUG00000009571	SHQ1	63	58.571	Macaca_mulatta
ENSGMOG00000007350	shq1	100	59.799	ENSMNEG00000032667	SHQ1	68	59.799	Macaca_nemestrina
ENSGMOG00000007350	shq1	100	59.548	ENSMLEG00000038493	SHQ1	68	59.548	Mandrillus_leucophaeus
ENSGMOG00000007350	shq1	100	75.641	ENSMAMG00000023432	shq1	61	75.641	Mastacembelus_armatus
ENSGMOG00000007350	shq1	100	75.578	ENSMZEG00005008649	shq1	65	76.093	Maylandia_zebra
ENSGMOG00000007350	shq1	100	59.950	ENSMGAG00000009640	SHQ1	65	59.446	Meleagris_gallopavo
ENSGMOG00000007350	shq1	100	58.942	ENSMAUG00000022030	Shq1	58	73.171	Mesocricetus_auratus
ENSGMOG00000007350	shq1	100	58.690	ENSMICG00000009224	SHQ1	68	58.690	Microcebus_murinus
ENSGMOG00000007350	shq1	100	57.935	ENSMOCG00000017836	Shq1	58	73.171	Microtus_ochrogaster
ENSGMOG00000007350	shq1	100	74.485	ENSMMOG00000010569	shq1	66	74.227	Mola_mola
ENSGMOG00000007350	shq1	100	56.784	ENSMODG00000003926	SHQ1	71	56.784	Monodelphis_domestica
ENSGMOG00000007350	shq1	100	74.872	ENSMALG00000008870	shq1	65	75.128	Monopterus_albus
ENSGMOG00000007350	shq1	100	58.690	MGP_CAROLIEiJ_G0028689	Shq1	57	73.171	Mus_caroli
ENSGMOG00000007350	shq1	100	59.194	ENSMUSG00000035378	Shq1	57	75.610	Mus_musculus
ENSGMOG00000007350	shq1	100	59.045	MGP_PahariEiJ_G0022440	Shq1	57	73.171	Mus_pahari
ENSGMOG00000007350	shq1	100	59.045	MGP_SPRETEiJ_G0029717	Shq1	57	75.610	Mus_spretus
ENSGMOG00000007350	shq1	100	59.194	ENSMPUG00000017006	SHQ1	67	59.446	Mustela_putorius_furo
ENSGMOG00000007350	shq1	88	55.840	ENSMLUG00000013539	SHQ1	66	56.695	Myotis_lucifugus
ENSGMOG00000007350	shq1	100	53.333	ENSNGAG00000023317	Shq1	68	53.846	Nannospalax_galili
ENSGMOG00000007350	shq1	77	72.667	ENSNBRG00000024004	shq1	59	73.333	Neolamprologus_brichardi
ENSGMOG00000007350	shq1	100	59.000	ENSNLEG00000002731	SHQ1	68	58.794	Nomascus_leucogenys
ENSGMOG00000007350	shq1	100	38.791	ENSMEUG00000009350	-	73	37.028	Notamacropus_eugenii
ENSGMOG00000007350	shq1	67	67.241	ENSOPRG00000013963	-	73	67.241	Ochotona_princeps
ENSGMOG00000007350	shq1	100	58.586	ENSODEG00000009192	SHQ1	61	78.049	Octodon_degus
ENSGMOG00000007350	shq1	100	75.578	ENSONIG00000020264	shq1	65	76.093	Oreochromis_niloticus
ENSGMOG00000007350	shq1	100	59.045	ENSOCUG00000016695	SHQ1	68	58.690	Oryctolagus_cuniculus
ENSGMOG00000007350	shq1	100	74.227	ENSORLG00000023538	shq1	71	74.227	Oryzias_latipes
ENSGMOG00000007350	shq1	100	73.711	ENSORLG00020003697	shq1	70	73.711	Oryzias_latipes_hni
ENSGMOG00000007350	shq1	100	73.454	ENSORLG00015021040	shq1	71	73.454	Oryzias_latipes_hsok
ENSGMOG00000007350	shq1	100	72.680	ENSOMEG00000001225	shq1	70	72.680	Oryzias_melastigma
ENSGMOG00000007350	shq1	100	57.750	ENSOGAG00000003898	SHQ1	70	58.000	Otolemur_garnettii
ENSGMOG00000007350	shq1	100	56.858	ENSOARG00000009547	SHQ1	69	57.855	Ovis_aries
ENSGMOG00000007350	shq1	100	59.250	ENSPPAG00000027714	SHQ1	68	59.045	Pan_paniscus
ENSGMOG00000007350	shq1	100	40.547	ENSPPAG00000043263	-	65	40.863	Pan_paniscus
ENSGMOG00000007350	shq1	100	58.942	ENSPPRG00000004769	SHQ1	69	59.194	Panthera_pardus
ENSGMOG00000007350	shq1	100	55.357	ENSPTIG00000011478	SHQ1	68	54.386	Panthera_tigris_altaica
ENSGMOG00000007350	shq1	100	59.250	ENSPTRG00000015106	SHQ1	68	59.045	Pan_troglodytes
ENSGMOG00000007350	shq1	100	39.750	ENSPTRG00000048303	-	65	39.848	Pan_troglodytes
ENSGMOG00000007350	shq1	100	59.045	ENSPANG00000002881	SHQ1	68	60.302	Papio_anubis
ENSGMOG00000007350	shq1	100	70.000	ENSPKIG00000021517	shq1	69	69.231	Paramormyrops_kingsleyae
ENSGMOG00000007350	shq1	100	58.291	ENSPSIG00000005536	SHQ1	65	58.543	Pelodiscus_sinensis
ENSGMOG00000007350	shq1	100	68.041	ENSPMGG00000008838	shq1	66	68.041	Periophthalmus_magnuspinnatus
ENSGMOG00000007350	shq1	100	58.186	ENSPEMG00000000251	Shq1	57	73.171	Peromyscus_maniculatus_bairdii
ENSGMOG00000007350	shq1	99	60.152	ENSPMAG00000005372	shq1	89	60.152	Petromyzon_marinus
ENSGMOG00000007350	shq1	99	71.795	ENSPFOG00000003118	shq1	72	71.795	Poecilia_formosa
ENSGMOG00000007350	shq1	77	69.900	ENSPMEG00000011076	shq1	66	69.900	Poecilia_mexicana
ENSGMOG00000007350	shq1	88	71.261	ENSPREG00000000591	shq1	66	71.261	Poecilia_reticulata
ENSGMOG00000007350	shq1	100	59.250	ENSPPYG00000013717	SHQ1	68	59.045	Pongo_abelii
ENSGMOG00000007350	shq1	100	58.690	ENSPCAG00000009035	SHQ1	69	58.690	Procavia_capensis
ENSGMOG00000007350	shq1	100	57.895	ENSPCOG00000008415	SHQ1	68	58.897	Propithecus_coquereli
ENSGMOG00000007350	shq1	100	58.186	ENSPVAG00000017392	SHQ1	69	58.186	Pteropus_vampyrus
ENSGMOG00000007350	shq1	100	75.578	ENSPNYG00000003878	shq1	65	76.093	Pundamilia_nyererei
ENSGMOG00000007350	shq1	100	67.949	ENSPNAG00000026840	shq1	64	68.718	Pygocentrus_nattereri
ENSGMOG00000007350	shq1	100	58.794	ENSRNOG00000005433	Shq1	66	59.045	Rattus_norvegicus
ENSGMOG00000007350	shq1	100	57.801	ENSRBIG00000026280	SHQ1	68	57.545	Rhinopithecus_bieti
ENSGMOG00000007350	shq1	100	60.050	ENSRROG00000034126	SHQ1	69	60.050	Rhinopithecus_roxellana
ENSGMOG00000007350	shq1	100	51.759	ENSSBOG00000021038	SHQ1	66	51.759	Saimiri_boliviensis_boliviensis
ENSGMOG00000007350	shq1	100	58.291	ENSSHAG00000015077	SHQ1	70	58.291	Sarcophilus_harrisii
ENSGMOG00000007350	shq1	100	69.330	ENSSFOG00015016241	shq1	71	69.072	Scleropages_formosus
ENSGMOG00000007350	shq1	100	73.522	ENSSMAG00000016151	shq1	65	73.522	Scophthalmus_maximus
ENSGMOG00000007350	shq1	100	76.864	ENSSDUG00000011986	shq1	64	76.864	Seriola_dumerili
ENSGMOG00000007350	shq1	100	77.320	ENSSLDG00000013908	shq1	64	77.320	Seriola_lalandi_dorsalis
ENSGMOG00000007350	shq1	86	55.556	ENSSARG00000007119	SHQ1	60	55.263	Sorex_araneus
ENSGMOG00000007350	shq1	77	56.958	ENSSPUG00000011526	-	58	56.958	Sphenodon_punctatus
ENSGMOG00000007350	shq1	100	58.438	ENSSSCG00000011518	SHQ1	68	58.438	Sus_scrofa
ENSGMOG00000007350	shq1	100	62.095	ENSTGUG00000009933	SHQ1	69	62.095	Taeniopygia_guttata
ENSGMOG00000007350	shq1	100	67.784	ENSTRUG00000009446	shq1	66	67.784	Takifugu_rubripes
ENSGMOG00000007350	shq1	100	68.112	ENSTNIG00000007354	shq1	87	67.602	Tetraodon_nigroviridis
ENSGMOG00000007350	shq1	100	58.794	ENSTTRG00000005320	SHQ1	69	58.794	Tursiops_truncatus
ENSGMOG00000007350	shq1	100	58.505	ENSUMAG00000024031	SHQ1	67	58.763	Ursus_maritimus
ENSGMOG00000007350	shq1	88	49.284	ENSVPAG00000004880	SHQ1	66	49.284	Vicugna_pacos
ENSGMOG00000007350	shq1	100	58.438	ENSVVUG00000013906	SHQ1	68	58.942	Vulpes_vulpes
ENSGMOG00000007350	shq1	100	58.779	ENSXETG00000032215	shq1	64	58.163	Xenopus_tropicalis