EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000007360 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 1044 bases
Position: chrGeneScaffold_4201:100551-101594
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000007866	zf-CCCH	PF00642.24	1.1e-30	1	4
ENSGMOP00000007866	zf-CCCH	PF00642.24	1.1e-30	2	4
ENSGMOP00000007866	zf-CCCH	PF00642.24	1.1e-30	3	4
ENSGMOP00000007866	zf-CCCH	PF00642.24	1.1e-30	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000008095	-	876	-	ENSGMOP00000007866	291 (aa)	-	UPI00023F1275

Gene Model

Click here to download ENSGMOG00000007360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000007360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000007360	cth1	88	62.590	ENSAPOG00000012552	cth1	95	63.309	Acanthochromis_polyacanthus
ENSGMOG00000007360	cth1	90	60.854	ENSACIG00000016026	cth1	99	59.248	Amphilophus_citrinellus
ENSGMOG00000007360	cth1	100	64.650	ENSAOCG00000001644	cth1	99	66.242	Amphiprion_ocellaris
ENSGMOG00000007360	cth1	100	64.650	ENSAPEG00000008930	cth1	99	66.242	Amphiprion_percula
ENSGMOG00000007360	cth1	99	65.031	ENSATEG00000002281	cth1	96	65.031	Anabas_testudineus
ENSGMOG00000007360	cth1	88	58.484	ENSACLG00000015353	cth1	95	59.857	Astatotilapia_calliptera
ENSGMOG00000007360	cth1	95	55.414	ENSAMXG00000025717	cth1	91	54.209	Astyanax_mexicanus
ENSGMOG00000007360	cth1	100	63.692	ENSCSEG00000014617	cth1	99	64.615	Cynoglossus_semilaevis
ENSGMOG00000007360	cth1	100	57.556	ENSCVAG00000001680	cth1	65	59.105	Cyprinodon_variegatus
ENSGMOG00000007360	cth1	88	55.254	ENSDARG00000057328	cth1	89	55.593	Danio_rerio
ENSGMOG00000007360	cth1	99	54.217	ENSELUG00000012738	cth1	98	51.662	Esox_lucius
ENSGMOG00000007360	cth1	100	55.205	ENSFHEG00000022665	cth1	98	58.147	Fundulus_heteroclitus
ENSGMOG00000007360	cth1	100	55.000	ENSGAFG00000019288	cth1	99	55.937	Gambusia_affinis
ENSGMOG00000007360	cth1	100	69.153	ENSGACG00000000802	cth1	99	69.153	Gasterosteus_aculeatus
ENSGMOG00000007360	cth1	100	59.295	ENSHBUG00000014400	cth1	99	60.510	Haplochromis_burtoni
ENSGMOG00000007360	cth1	95	53.929	ENSHCOG00000010276	cth1	88	52.692	Hippocampus_comes
ENSGMOG00000007360	cth1	96	56.013	ENSIPUG00000018040	cth1	89	55.782	Ictalurus_punctatus
ENSGMOG00000007360	cth1	100	61.039	ENSKMAG00000005944	cth1	99	62.662	Kryptolebias_marmoratus
ENSGMOG00000007360	cth1	100	68.750	ENSLBEG00000019253	cth1	99	68.750	Labrus_bergylta
ENSGMOG00000007360	cth1	72	52.582	ENSLOCG00000002047	cth1	98	52.582	Lepisosteus_oculatus
ENSGMOG00000007360	cth1	99	50.663	ENSMAMG00000001525	cth1	65	59.016	Mastacembelus_armatus
ENSGMOG00000007360	cth1	100	58.958	ENSMZEG00005022335	cth1	99	60.194	Maylandia_zebra
ENSGMOG00000007360	cth1	95	65.033	ENSMMOG00000020518	cth1	100	65.359	Mola_mola
ENSGMOG00000007360	cth1	100	51.194	ENSMALG00000020738	cth1	58	64.091	Monopterus_albus
ENSGMOG00000007360	cth1	89	59.559	ENSNBRG00000022789	cth1	88	60.949	Neolamprologus_brichardi
ENSGMOG00000007360	cth1	100	60.261	ENSONIG00000021318	cth1	99	61.935	Oreochromis_niloticus
ENSGMOG00000007360	cth1	100	54.194	ENSORLG00000022847	cth1	99	58.033	Oryzias_latipes
ENSGMOG00000007360	cth1	100	54.194	ENSORLG00020011979	cth1	99	58.033	Oryzias_latipes_hni
ENSGMOG00000007360	cth1	100	54.194	ENSORLG00015013084	cth1	99	58.033	Oryzias_latipes_hsok
ENSGMOG00000007360	cth1	82	59.363	ENSOMEG00000005809	cth1	81	60.490	Oryzias_melastigma
ENSGMOG00000007360	cth1	98	49.697	ENSPKIG00000015883	cth1	89	50.331	Paramormyrops_kingsleyae
ENSGMOG00000007360	cth1	99	62.614	ENSPMGG00000004275	cth1	100	63.830	Periophthalmus_magnuspinnatus
ENSGMOG00000007360	cth1	100	55.280	ENSPFOG00000013583	cth1	93	56.918	Poecilia_formosa
ENSGMOG00000007360	cth1	100	55.590	ENSPLAG00000018158	cth1	93	57.233	Poecilia_latipinna
ENSGMOG00000007360	cth1	100	56.604	ENSPMEG00000005744	cth1	99	57.547	Poecilia_mexicana
ENSGMOG00000007360	cth1	99	57.098	ENSPREG00000004099	cth1	99	57.413	Poecilia_reticulata
ENSGMOG00000007360	cth1	87	59.925	ENSPNYG00000016705	cth1	84	59.761	Pundamilia_nyererei
ENSGMOG00000007360	cth1	96	54.747	ENSPNAG00000013147	cth1	89	54.576	Pygocentrus_nattereri
ENSGMOG00000007360	cth1	93	56.291	ENSSFOG00015017190	cth1	95	57.049	Scleropages_formosus
ENSGMOG00000007360	cth1	100	63.077	ENSSMAG00000007977	cth1	99	64.308	Scophthalmus_maximus
ENSGMOG00000007360	cth1	100	64.157	ENSSDUG00000004321	cth1	99	66.265	Seriola_dumerili
ENSGMOG00000007360	cth1	99	65.060	ENSSLDG00000010023	-	99	65.663	Seriola_lalandi_dorsalis
ENSGMOG00000007360	cth1	100	64.565	ENSSLDG00000012760	cth1	99	65.165	Seriola_lalandi_dorsalis
ENSGMOG00000007360	cth1	100	64.865	ENSSLDG00000004516	-	99	65.465	Seriola_lalandi_dorsalis
ENSGMOG00000007360	cth1	100	60.436	ENSSPAG00000018659	cth1	99	63.551	Stegastes_partitus
ENSGMOG00000007360	cth1	100	56.923	ENSTRUG00000012770	cth1	99	59.385	Takifugu_rubripes
ENSGMOG00000007360	cth1	100	56.966	ENSTNIG00000000740	cth1	99	57.362	Tetraodon_nigroviridis
ENSGMOG00000007360	cth1	88	57.977	ENSXCOG00000003710	cth1	82	60.538	Xiphophorus_couchianus
ENSGMOG00000007360	cth1	100	57.729	ENSXMAG00000023885	cth1	99	58.621	Xiphophorus_maculatus