EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000007460 (Gene tree)
Gene ID: -
Gene Symbol: trnt1
Alias: zgc:86645
Full Name: tRNA nucleotidyl transferase%2C CCA-adding%2C 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 25416 bases
Position: chrGeneScaffold_3655:1253653-1279068
Accession: ZDB-GENE-040625-176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000007974	PolyA_pol	PF01743.20	1.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000008204	-	1278	-	ENSGMOP00000007974	426 (aa)	-	UPI00023F12E0

Gene Model

Click here to download ENSGMOG00000007460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000007460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000007460	trnt1	98	65.882	ENSG00000072756	TRNT1	97	65.882	Homo_sapiens
ENSGMOG00000007460	trnt1	100	77.934	ENSAPOG00000013687	trnt1	99	77.934	Acanthochromis_polyacanthus
ENSGMOG00000007460	trnt1	96	66.262	ENSAMEG00000014520	TRNT1	94	66.262	Ailuropoda_melanoleuca
ENSGMOG00000007460	trnt1	100	79.577	ENSACIG00000021706	trnt1	99	79.577	Amphilophus_citrinellus
ENSGMOG00000007460	trnt1	100	80.516	ENSAOCG00000024612	trnt1	99	80.516	Amphiprion_ocellaris
ENSGMOG00000007460	trnt1	97	73.301	ENSAPEG00000022627	trnt1	95	73.301	Amphiprion_percula
ENSGMOG00000007460	trnt1	94	83.582	ENSATEG00000008928	trnt1	99	83.582	Anabas_testudineus
ENSGMOG00000007460	trnt1	89	68.865	ENSAPLG00000004258	TRNT1	94	68.865	Anas_platyrhynchos
ENSGMOG00000007460	trnt1	96	66.830	ENSACAG00000005657	TRNT1	93	66.830	Anolis_carolinensis
ENSGMOG00000007460	trnt1	95	67.160	ENSANAG00000024802	TRNT1	93	67.160	Aotus_nancymaae
ENSGMOG00000007460	trnt1	100	79.577	ENSACLG00000022227	trnt1	99	79.577	Astatotilapia_calliptera
ENSGMOG00000007460	trnt1	100	75.000	ENSAMXG00000003960	trnt1	99	75.000	Astyanax_mexicanus
ENSGMOG00000007460	trnt1	96	64.819	ENSBTAG00000019534	TRNT1	96	64.819	Bos_taurus
ENSGMOG00000007460	trnt1	94	42.822	WBGene00010089	hpo-31	93	42.822	Caenorhabditis_elegans
ENSGMOG00000007460	trnt1	95	67.407	ENSCJAG00000015466	TRNT1	93	67.407	Callithrix_jacchus
ENSGMOG00000007460	trnt1	97	66.265	ENSCAFG00000005985	TRNT1	95	66.265	Canis_familiaris
ENSGMOG00000007460	trnt1	97	66.265	ENSCAFG00020014746	TRNT1	95	66.265	Canis_lupus_dingo
ENSGMOG00000007460	trnt1	96	65.783	ENSCHIG00000007030	TRNT1	95	65.783	Capra_hircus
ENSGMOG00000007460	trnt1	95	68.148	ENSTSYG00000013390	TRNT1	93	68.148	Carlito_syrichta
ENSGMOG00000007460	trnt1	88	54.278	ENSCAPG00000006891	TRNT1	99	54.278	Cavia_aperea
ENSGMOG00000007460	trnt1	95	66.914	ENSCPOG00000007849	TRNT1	93	66.914	Cavia_porcellus
ENSGMOG00000007460	trnt1	92	67.179	ENSCCAG00000002919	TRNT1	96	67.969	Cebus_capucinus
ENSGMOG00000007460	trnt1	95	67.901	ENSCATG00000031985	TRNT1	92	67.901	Cercocebus_atys
ENSGMOG00000007460	trnt1	96	67.568	ENSCLAG00000005186	TRNT1	84	78.771	Chinchilla_lanigera
ENSGMOG00000007460	trnt1	95	68.148	ENSCSAG00000011052	TRNT1	93	68.148	Chlorocebus_sabaeus
ENSGMOG00000007460	trnt1	80	78.409	ENSCHOG00000005712	TRNT1	78	78.409	Choloepus_hoffmanni
ENSGMOG00000007460	trnt1	98	67.386	ENSCPBG00000017636	TRNT1	95	67.386	Chrysemys_picta_bellii
ENSGMOG00000007460	trnt1	94	43.317	ENSCING00000007069	-	99	43.317	Ciona_intestinalis
ENSGMOG00000007460	trnt1	94	42.680	ENSCSAVG00000007494	-	95	42.680	Ciona_savignyi
ENSGMOG00000007460	trnt1	95	68.395	ENSCANG00000039030	TRNT1	93	68.395	Colobus_angolensis_palliatus
ENSGMOG00000007460	trnt1	96	67.076	ENSCGRG00001009998	Trnt1	94	67.076	Cricetulus_griseus_chok1gshd
ENSGMOG00000007460	trnt1	96	67.076	ENSCGRG00000013410	Trnt1	87	76.216	Cricetulus_griseus_crigri
ENSGMOG00000007460	trnt1	100	77.465	ENSCSEG00000008157	trnt1	99	77.465	Cynoglossus_semilaevis
ENSGMOG00000007460	trnt1	100	78.404	ENSCVAG00000019770	trnt1	99	78.404	Cyprinodon_variegatus
ENSGMOG00000007460	trnt1	99	76.485	ENSDARG00000075297	trnt1	98	76.485	Danio_rerio
ENSGMOG00000007460	trnt1	95	68.642	ENSDNOG00000008837	TRNT1	93	68.642	Dasypus_novemcinctus
ENSGMOG00000007460	trnt1	99	65.268	ENSDORG00000014035	Trnt1	99	65.268	Dipodomys_ordii
ENSGMOG00000007460	trnt1	100	45.833	FBgn0037369	CG2100	89	45.833	Drosophila_melanogaster
ENSGMOG00000007460	trnt1	57	72.199	ENSETEG00000018177	TRNT1	97	72.199	Echinops_telfairi
ENSGMOG00000007460	trnt1	95	61.042	ENSEBUG00000012779	-	95	61.042	Eptatretus_burgeri
ENSGMOG00000007460	trnt1	99	65.661	ENSEASG00005003577	TRNT1	99	65.661	Equus_asinus_asinus
ENSGMOG00000007460	trnt1	99	65.893	ENSECAG00000014420	TRNT1	99	65.893	Equus_caballus
ENSGMOG00000007460	trnt1	98	66.905	ENSEEUG00000009567	TRNT1	97	66.905	Erinaceus_europaeus
ENSGMOG00000007460	trnt1	100	78.454	ENSELUG00000003802	trnt1	99	78.454	Esox_lucius
ENSGMOG00000007460	trnt1	99	65.429	ENSFCAG00000026805	TRNT1	98	65.429	Felis_catus
ENSGMOG00000007460	trnt1	89	69.393	ENSFALG00000013539	TRNT1	98	69.393	Ficedula_albicollis
ENSGMOG00000007460	trnt1	95	67.901	ENSFDAG00000018412	TRNT1	93	67.901	Fukomys_damarensis
ENSGMOG00000007460	trnt1	100	78.638	ENSFHEG00000019294	trnt1	99	78.638	Fundulus_heteroclitus
ENSGMOG00000007460	trnt1	99	64.692	ENSGALG00000017368	TRNT1	96	64.692	Gallus_gallus
ENSGMOG00000007460	trnt1	100	78.638	ENSGAFG00000008647	trnt1	99	78.638	Gambusia_affinis
ENSGMOG00000007460	trnt1	100	80.047	ENSGACG00000011903	trnt1	96	83.246	Gasterosteus_aculeatus
ENSGMOG00000007460	trnt1	96	68.537	ENSGAGG00000020942	TRNT1	93	68.537	Gopherus_agassizii
ENSGMOG00000007460	trnt1	98	66.118	ENSGGOG00000015286	TRNT1	97	66.118	Gorilla_gorilla
ENSGMOG00000007460	trnt1	100	79.812	ENSHBUG00000002797	trnt1	99	79.812	Haplochromis_burtoni
ENSGMOG00000007460	trnt1	96	68.059	ENSHGLG00000003649	TRNT1	94	68.059	Heterocephalus_glaber_female
ENSGMOG00000007460	trnt1	97	61.466	ENSHGLG00000000221	-	97	61.466	Heterocephalus_glaber_female
ENSGMOG00000007460	trnt1	96	66.830	ENSHGLG00100016421	TRNT1	94	66.830	Heterocephalus_glaber_male
ENSGMOG00000007460	trnt1	96	76.658	ENSHCOG00000010618	trnt1	95	76.658	Hippocampus_comes
ENSGMOG00000007460	trnt1	100	75.701	ENSIPUG00000000971	trnt1	99	75.701	Ictalurus_punctatus
ENSGMOG00000007460	trnt1	96	67.568	ENSSTOG00000000150	TRNT1	86	78.771	Ictidomys_tridecemlineatus
ENSGMOG00000007460	trnt1	96	67.568	ENSJJAG00000018561	Trnt1	94	67.568	Jaculus_jaculus
ENSGMOG00000007460	trnt1	100	77.465	ENSKMAG00000011307	trnt1	99	77.465	Kryptolebias_marmoratus
ENSGMOG00000007460	trnt1	97	76.456	ENSLBEG00000019457	trnt1	97	76.456	Labrus_bergylta
ENSGMOG00000007460	trnt1	96	70.025	ENSLACG00000013227	TRNT1	94	70.025	Latimeria_chalumnae
ENSGMOG00000007460	trnt1	99	70.922	ENSLOCG00000011105	trnt1	97	70.922	Lepisosteus_oculatus
ENSGMOG00000007460	trnt1	95	67.901	ENSLAFG00000023191	TRNT1	93	67.901	Loxodonta_africana
ENSGMOG00000007460	trnt1	95	68.148	ENSMFAG00000045113	TRNT1	92	68.148	Macaca_fascicularis
ENSGMOG00000007460	trnt1	95	68.148	ENSMMUG00000017983	TRNT1	92	68.148	Macaca_mulatta
ENSGMOG00000007460	trnt1	95	68.148	ENSMNEG00000037805	TRNT1	92	68.148	Macaca_nemestrina
ENSGMOG00000007460	trnt1	89	68.766	ENSMLEG00000033671	TRNT1	99	68.766	Mandrillus_leucophaeus
ENSGMOG00000007460	trnt1	100	79.812	ENSMAMG00000023401	trnt1	99	79.812	Mastacembelus_armatus
ENSGMOG00000007460	trnt1	100	79.577	ENSMZEG00005009141	trnt1	99	79.577	Maylandia_zebra
ENSGMOG00000007460	trnt1	74	65.506	ENSMGAG00000009971	TRNT1	98	65.506	Meleagris_gallopavo
ENSGMOG00000007460	trnt1	96	67.076	ENSMAUG00000020707	Trnt1	94	67.076	Mesocricetus_auratus
ENSGMOG00000007460	trnt1	97	66.587	ENSMICG00000016615	TRNT1	97	66.587	Microcebus_murinus
ENSGMOG00000007460	trnt1	96	67.076	ENSMOCG00000004539	Trnt1	94	67.076	Microtus_ochrogaster
ENSGMOG00000007460	trnt1	96	80.098	ENSMMOG00000010742	trnt1	96	80.098	Mola_mola
ENSGMOG00000007460	trnt1	96	66.585	ENSMODG00000004368	TRNT1	94	66.585	Monodelphis_domestica
ENSGMOG00000007460	trnt1	100	75.822	ENSMALG00000008376	trnt1	99	75.822	Monopterus_albus
ENSGMOG00000007460	trnt1	96	67.568	MGP_CAROLIEiJ_G0028698	Trnt1	90	75.410	Mus_caroli
ENSGMOG00000007460	trnt1	96	67.322	ENSMUSG00000013736	Trnt1	83	79.330	Mus_musculus
ENSGMOG00000007460	trnt1	96	67.568	MGP_PahariEiJ_G0022449	Trnt1	88	79.330	Mus_pahari
ENSGMOG00000007460	trnt1	96	67.568	MGP_SPRETEiJ_G0029726	Trnt1	83	79.330	Mus_spretus
ENSGMOG00000007460	trnt1	96	66.585	ENSMPUG00000017017	TRNT1	94	66.585	Mustela_putorius_furo
ENSGMOG00000007460	trnt1	89	69.029	ENSMLUG00000011864	TRNT1	99	69.029	Myotis_lucifugus
ENSGMOG00000007460	trnt1	96	67.813	ENSNGAG00000000537	Trnt1	94	67.813	Nannospalax_galili
ENSGMOG00000007460	trnt1	81	80.692	ENSNBRG00000023606	trnt1	99	80.692	Neolamprologus_brichardi
ENSGMOG00000007460	trnt1	95	68.148	ENSNLEG00000003226	TRNT1	93	68.148	Nomascus_leucogenys
ENSGMOG00000007460	trnt1	96	65.111	ENSMEUG00000004684	TRNT1	94	65.111	Notamacropus_eugenii
ENSGMOG00000007460	trnt1	89	66.142	ENSOPRG00000015067	TRNT1	99	66.142	Ochotona_princeps
ENSGMOG00000007460	trnt1	95	67.654	ENSODEG00000007597	TRNT1	93	67.654	Octodon_degus
ENSGMOG00000007460	trnt1	100	80.986	ENSONIG00000020273	trnt1	98	80.986	Oreochromis_niloticus
ENSGMOG00000007460	trnt1	95	63.210	ENSOANG00000007514	TRNT1	94	63.210	Ornithorhynchus_anatinus
ENSGMOG00000007460	trnt1	97	66.667	ENSOCUG00000008580	TRNT1	97	66.667	Oryctolagus_cuniculus
ENSGMOG00000007460	trnt1	98	76.259	ENSORLG00000003165	trnt1	99	76.259	Oryzias_latipes
ENSGMOG00000007460	trnt1	98	76.019	ENSORLG00020022060	trnt1	99	76.019	Oryzias_latipes_hni
ENSGMOG00000007460	trnt1	98	76.259	ENSORLG00015018915	trnt1	98	76.259	Oryzias_latipes_hsok
ENSGMOG00000007460	trnt1	98	71.875	ENSOMEG00000003331	trnt1	98	71.875	Oryzias_melastigma
ENSGMOG00000007460	trnt1	96	65.783	ENSOARG00000008631	TRNT1	95	65.783	Ovis_aries
ENSGMOG00000007460	trnt1	98	65.882	ENSPPAG00000043566	TRNT1	97	65.882	Pan_paniscus
ENSGMOG00000007460	trnt1	96	67.317	ENSPPRG00000001327	TRNT1	94	67.317	Panthera_pardus
ENSGMOG00000007460	trnt1	99	65.893	ENSPTIG00000011448	TRNT1	98	65.893	Panthera_tigris_altaica
ENSGMOG00000007460	trnt1	98	65.882	ENSPTRG00000014564	TRNT1	97	65.882	Pan_troglodytes
ENSGMOG00000007460	trnt1	95	67.901	ENSPANG00000025944	TRNT1	92	67.901	Papio_anubis
ENSGMOG00000007460	trnt1	96	76.413	ENSPKIG00000020015	trnt1	94	76.413	Paramormyrops_kingsleyae
ENSGMOG00000007460	trnt1	89	70.079	ENSPSIG00000017356	TRNT1	99	69.274	Pelodiscus_sinensis
ENSGMOG00000007460	trnt1	100	76.056	ENSPMGG00000008888	trnt1	98	76.056	Periophthalmus_magnuspinnatus
ENSGMOG00000007460	trnt1	96	67.322	ENSPEMG00000019845	Trnt1	94	67.322	Peromyscus_maniculatus_bairdii
ENSGMOG00000007460	trnt1	96	66.830	ENSPCIG00000030436	TRNT1	94	66.830	Phascolarctos_cinereus
ENSGMOG00000007460	trnt1	99	79.433	ENSPFOG00000006194	trnt1	98	79.433	Poecilia_formosa
ENSGMOG00000007460	trnt1	99	79.433	ENSPLAG00000015623	trnt1	99	81.592	Poecilia_latipinna
ENSGMOG00000007460	trnt1	100	78.873	ENSPMEG00000012216	trnt1	99	81.343	Poecilia_mexicana
ENSGMOG00000007460	trnt1	100	79.108	ENSPREG00000021470	trnt1	99	79.108	Poecilia_reticulata
ENSGMOG00000007460	trnt1	96	67.322	ENSPPYG00000013702	TRNT1	94	67.322	Pongo_abelii
ENSGMOG00000007460	trnt1	89	69.554	ENSPCAG00000001951	TRNT1	99	69.554	Procavia_capensis
ENSGMOG00000007460	trnt1	95	67.901	ENSPCOG00000022228	TRNT1	93	67.901	Propithecus_coquereli
ENSGMOG00000007460	trnt1	89	68.241	ENSPVAG00000008784	TRNT1	99	68.241	Pteropus_vampyrus
ENSGMOG00000007460	trnt1	100	79.577	ENSPNYG00000003120	trnt1	99	79.577	Pundamilia_nyererei
ENSGMOG00000007460	trnt1	100	75.935	ENSPNAG00000000565	trnt1	99	75.935	Pygocentrus_nattereri
ENSGMOG00000007460	trnt1	96	68.059	ENSRNOG00000006432	Trnt1	94	68.059	Rattus_norvegicus
ENSGMOG00000007460	trnt1	95	67.160	ENSRBIG00000042632	TRNT1	93	67.160	Rhinopithecus_bieti
ENSGMOG00000007460	trnt1	95	68.148	ENSRROG00000036866	TRNT1	93	68.148	Rhinopithecus_roxellana
ENSGMOG00000007460	trnt1	95	67.407	ENSSBOG00000021208	TRNT1	93	67.407	Saimiri_boliviensis_boliviensis
ENSGMOG00000007460	trnt1	97	65.301	ENSSHAG00000018861	TRNT1	96	65.301	Sarcophilus_harrisii
ENSGMOG00000007460	trnt1	96	76.167	ENSSFOG00015020844	trnt1	94	76.167	Scleropages_formosus
ENSGMOG00000007460	trnt1	100	80.986	ENSSMAG00000015432	trnt1	97	80.986	Scophthalmus_maximus
ENSGMOG00000007460	trnt1	100	81.925	ENSSDUG00000012320	trnt1	99	81.925	Seriola_dumerili
ENSGMOG00000007460	trnt1	62	76.718	ENSSLDG00000016463	-	91	81.590	Seriola_lalandi_dorsalis
ENSGMOG00000007460	trnt1	100	81.455	ENSSLDG00000009325	trnt1	99	81.455	Seriola_lalandi_dorsalis
ENSGMOG00000007460	trnt1	89	69.554	ENSSPUG00000014153	TRNT1	99	69.554	Sphenodon_punctatus
ENSGMOG00000007460	trnt1	100	79.577	ENSSPAG00000021005	trnt1	99	79.577	Stegastes_partitus
ENSGMOG00000007460	trnt1	97	66.194	ENSSSCG00000011529	TRNT1	97	66.268	Sus_scrofa
ENSGMOG00000007460	trnt1	94	68.080	ENSTGUG00000010192	TRNT1	99	68.080	Taeniopygia_guttata
ENSGMOG00000007460	trnt1	100	78.169	ENSTRUG00000001088	trnt1	99	78.169	Takifugu_rubripes
ENSGMOG00000007460	trnt1	99	78.199	ENSTNIG00000007363	trnt1	97	78.199	Tetraodon_nigroviridis
ENSGMOG00000007460	trnt1	57	61.411	ENSTBEG00000006367	TRNT1	80	61.411	Tupaia_belangeri
ENSGMOG00000007460	trnt1	96	65.783	ENSTTRG00000007803	TRNT1	96	65.783	Tursiops_truncatus
ENSGMOG00000007460	trnt1	96	66.341	ENSUAMG00000022574	TRNT1	94	66.341	Ursus_americanus
ENSGMOG00000007460	trnt1	96	66.098	ENSUMAG00000024092	TRNT1	94	66.098	Ursus_maritimus
ENSGMOG00000007460	trnt1	97	66.506	ENSVVUG00000012810	TRNT1	95	66.506	Vulpes_vulpes
ENSGMOG00000007460	trnt1	96	61.650	ENSXETG00000025091	trnt1	99	62.189	Xenopus_tropicalis
ENSGMOG00000007460	trnt1	100	78.404	ENSXCOG00000010150	trnt1	99	78.404	Xiphophorus_couchianus
ENSGMOG00000007460	trnt1	100	78.638	ENSXMAG00000002227	trnt1	99	78.638	Xiphophorus_maculatus