EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000007469 (Gene tree)
Gene ID: -
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 12299 bases
Position: chrGeneScaffold_4201:262508-274806
Accession: ZDB-GENE-030131-2492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000007992	KH_1	PF00013.29	1.9e-06	1	1
ENSGMOP00000007992	zf-CCHC	PF00098.23	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000008222	-	1650	-	ENSGMOP00000007992	549 (aa)	-	UPI00023F132E

Gene Model

Click here to download ENSGMOG00000007469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000007469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000007469	sf1	62	92.105	ENSAPOG00000012341	sf1	86	70.103	Acanthochromis_polyacanthus
ENSGMOG00000007469	sf1	60	87.651	ENSAMEG00000017828	SF1	50	87.651	Ailuropoda_melanoleuca
ENSGMOG00000007469	sf1	61	90.533	ENSACIG00000016514	sf1	75	75.615	Amphilophus_citrinellus
ENSGMOG00000007469	sf1	62	92.105	ENSAOCG00000010934	sf1	72	76.327	Amphiprion_ocellaris
ENSGMOG00000007469	sf1	62	92.105	ENSAPEG00000009498	sf1	72	76.327	Amphiprion_percula
ENSGMOG00000007469	sf1	61	93.713	ENSATEG00000001894	sf1	71	78.468	Anabas_testudineus
ENSGMOG00000007469	sf1	62	87.941	ENSANAG00000026664	-	79	87.941	Aotus_nancymaae
ENSGMOG00000007469	sf1	60	76.829	ENSANAG00000022607	-	76	77.538	Aotus_nancymaae
ENSGMOG00000007469	sf1	61	93.093	ENSACLG00000007633	sf1	84	68.412	Astatotilapia_calliptera
ENSGMOG00000007469	sf1	60	92.121	ENSAMXG00000003630	sf1	64	76.827	Astyanax_mexicanus
ENSGMOG00000007469	sf1	62	87.941	ENSBTAG00000001035	SF1	55	87.941	Bos_taurus
ENSGMOG00000007469	sf1	58	51.212	WBGene00013808	sfa-1	53	45.995	Caenorhabditis_elegans
ENSGMOG00000007469	sf1	62	87.941	ENSCJAG00000002780	SF1	52	87.941	Callithrix_jacchus
ENSGMOG00000007469	sf1	62	87.941	ENSCAFG00000014239	SF1	52	87.941	Canis_familiaris
ENSGMOG00000007469	sf1	62	87.941	ENSCAFG00020014381	SF1	52	87.941	Canis_lupus_dingo
ENSGMOG00000007469	sf1	62	87.941	ENSCHIG00000025867	SF1	60	87.941	Capra_hircus
ENSGMOG00000007469	sf1	50	91.273	ENSTSYG00000033618	SF1	81	91.273	Carlito_syrichta
ENSGMOG00000007469	sf1	59	88.308	ENSCAPG00000010762	SF1	56	88.308	Cavia_aperea
ENSGMOG00000007469	sf1	60	87.651	ENSCPOG00000012290	SF1	59	88.308	Cavia_porcellus
ENSGMOG00000007469	sf1	62	87.941	ENSCCAG00000037881	SF1	79	87.941	Cebus_capucinus
ENSGMOG00000007469	sf1	74	65.596	ENSCCAG00000023781	-	73	77.126	Cebus_capucinus
ENSGMOG00000007469	sf1	62	87.941	ENSCATG00000011564	SF1	79	87.941	Cercocebus_atys
ENSGMOG00000007469	sf1	62	87.941	ENSCSAG00000007258	SF1	60	87.941	Chlorocebus_sabaeus
ENSGMOG00000007469	sf1	56	81.613	ENSCHOG00000006008	SF1	57	81.613	Choloepus_hoffmanni
ENSGMOG00000007469	sf1	57	66.349	ENSCING00000005564	-	66	65.373	Ciona_intestinalis
ENSGMOG00000007469	sf1	75	56.109	ENSCSAVG00000009055	-	64	65.556	Ciona_savignyi
ENSGMOG00000007469	sf1	62	87.941	ENSCANG00000042201	SF1	79	87.941	Colobus_angolensis_palliatus
ENSGMOG00000007469	sf1	70	81.454	ENSCSEG00000014375	sf1	61	82.201	Cynoglossus_semilaevis
ENSGMOG00000007469	sf1	68	96.875	ENSCVAG00000001670	sf1	83	96.552	Cyprinodon_variegatus
ENSGMOG00000007469	sf1	62	94.152	ENSDARG00000008188	sf1	81	83.766	Danio_rerio
ENSGMOG00000007469	sf1	62	87.172	ENSDNOG00000001282	SF1	60	87.941	Dasypus_novemcinctus
ENSGMOG00000007469	sf1	62	87.941	ENSDORG00000016334	Sf1	52	87.941	Dipodomys_ordii
ENSGMOG00000007469	sf1	62	87.941	ENSEASG00005018272	SF1	60	87.941	Equus_asinus_asinus
ENSGMOG00000007469	sf1	62	87.941	ENSECAG00000024544	SF1	60	87.941	Equus_caballus
ENSGMOG00000007469	sf1	52	88.542	ENSEEUG00000001058	SF1	70	89.474	Erinaceus_europaeus
ENSGMOG00000007469	sf1	60	94.801	ENSELUG00000013225	sf1	57	81.609	Esox_lucius
ENSGMOG00000007469	sf1	62	87.941	ENSFCAG00000012231	SF1	52	87.941	Felis_catus
ENSGMOG00000007469	sf1	59	88.308	ENSFDAG00000009833	SF1	56	88.308	Fukomys_damarensis
ENSGMOG00000007469	sf1	62	92.398	ENSFHEG00000022656	sf1	72	76.230	Fundulus_heteroclitus
ENSGMOG00000007469	sf1	59	93.865	ENSGAFG00000019284	sf1	83	75.724	Gambusia_affinis
ENSGMOG00000007469	sf1	82	94.955	ENSGACG00000000826	sf1	97	75.045	Gasterosteus_aculeatus
ENSGMOG00000007469	sf1	61	94.595	ENSHBUG00000011598	sf1	72	76.423	Haplochromis_burtoni
ENSGMOG00000007469	sf1	62	87.941	ENSHGLG00000009541	SF1	58	87.941	Heterocephalus_glaber_female
ENSGMOG00000007469	sf1	59	88.308	ENSHGLG00100013879	-	56	88.308	Heterocephalus_glaber_male
ENSGMOG00000007469	sf1	55	84.211	ENSHGLG00100008076	-	62	84.211	Heterocephalus_glaber_male
ENSGMOG00000007469	sf1	60	93.958	ENSHCOG00000011388	sf1	71	78.992	Hippocampus_comes
ENSGMOG00000007469	sf1	59	76.923	ENSSTOG00000024353	-	56	76.923	Ictidomys_tridecemlineatus
ENSGMOG00000007469	sf1	59	88.308	ENSSTOG00000009790	-	50	88.308	Ictidomys_tridecemlineatus
ENSGMOG00000007469	sf1	62	87.941	ENSJJAG00000011788	Sf1	52	87.941	Jaculus_jaculus
ENSGMOG00000007469	sf1	61	91.343	ENSKMAG00000005854	sf1	75	77.347	Kryptolebias_marmoratus
ENSGMOG00000007469	sf1	59	94.479	ENSLBEG00000019836	sf1	84	73.420	Labrus_bergylta
ENSGMOG00000007469	sf1	72	71.703	ENSLACG00000018493	SF1	84	68.817	Latimeria_chalumnae
ENSGMOG00000007469	sf1	61	91.592	ENSLOCG00000002130	sf1	75	77.526	Lepisosteus_oculatus
ENSGMOG00000007469	sf1	60	87.651	ENSLAFG00000007201	SF1	81	70.204	Loxodonta_africana
ENSGMOG00000007469	sf1	62	87.941	ENSMFAG00000033122	SF1	79	87.941	Macaca_fascicularis
ENSGMOG00000007469	sf1	62	87.941	ENSMMUG00000022606	SF1	78	87.613	Macaca_mulatta
ENSGMOG00000007469	sf1	62	87.941	ENSMNEG00000037901	SF1	79	87.941	Macaca_nemestrina
ENSGMOG00000007469	sf1	60	87.500	ENSMLEG00000040706	SF1	76	88.308	Mandrillus_leucophaeus
ENSGMOG00000007469	sf1	61	94.294	ENSMAMG00000001780	sf1	71	78.008	Mastacembelus_armatus
ENSGMOG00000007469	sf1	61	94.595	ENSMZEG00005009196	sf1	72	76.423	Maylandia_zebra
ENSGMOG00000007469	sf1	62	87.941	ENSMICG00000001202	SF1	79	87.683	Microcebus_murinus
ENSGMOG00000007469	sf1	61	91.291	ENSMMOG00000020474	sf1	72	75.884	Mola_mola
ENSGMOG00000007469	sf1	60	87.613	ENSMODG00000029407	SF1	70	87.613	Monodelphis_domestica
ENSGMOG00000007469	sf1	61	90.801	ENSMALG00000020521	sf1	82	75.876	Monopterus_albus
ENSGMOG00000007469	sf1	74	74.541	MGP_CAROLIEiJ_G0022607	Sf1	99	92.481	Mus_caroli
ENSGMOG00000007469	sf1	74	74.541	ENSMUSG00000024949	Sf1	99	92.481	Mus_musculus
ENSGMOG00000007469	sf1	74	74.541	MGP_PahariEiJ_G0014101	Sf1	99	92.481	Mus_pahari
ENSGMOG00000007469	sf1	74	74.541	MGP_SPRETEiJ_G0023518	Sf1	99	92.481	Mus_spretus
ENSGMOG00000007469	sf1	61	86.866	ENSMPUG00000012684	SF1	50	87.651	Mustela_putorius_furo
ENSGMOG00000007469	sf1	60	87.651	ENSMLUG00000015217	-	50	87.651	Myotis_lucifugus
ENSGMOG00000007469	sf1	77	70.796	ENSMLUG00000029800	-	72	70.233	Myotis_lucifugus
ENSGMOG00000007469	sf1	62	87.941	ENSNGAG00000005550	Sf1	58	87.941	Nannospalax_galili
ENSGMOG00000007469	sf1	61	92.793	ENSNBRG00000017606	sf1	87	69.164	Neolamprologus_brichardi
ENSGMOG00000007469	sf1	62	87.941	ENSNLEG00000005236	-	79	87.941	Nomascus_leucogenys
ENSGMOG00000007469	sf1	59	88.509	ENSMEUG00000013424	SF1	59	88.509	Notamacropus_eugenii
ENSGMOG00000007469	sf1	52	88.542	ENSOPRG00000005008	SF1	56	89.474	Ochotona_princeps
ENSGMOG00000007469	sf1	62	85.000	ENSODEG00000006102	-	52	85.000	Octodon_degus
ENSGMOG00000007469	sf1	61	94.294	ENSONIG00000015728	sf1	72	76.220	Oreochromis_niloticus
ENSGMOG00000007469	sf1	60	87.651	ENSOCUG00000026486	SF1	51	87.651	Oryctolagus_cuniculus
ENSGMOG00000007469	sf1	61	93.393	ENSORLG00000011853	sf1	62	82.857	Oryzias_latipes
ENSGMOG00000007469	sf1	62	91.228	ENSORLG00020011834	sf1	63	81.352	Oryzias_latipes_hni
ENSGMOG00000007469	sf1	64	88.418	ENSORLG00015012855	sf1	62	82.506	Oryzias_latipes_hsok
ENSGMOG00000007469	sf1	62	91.228	ENSOMEG00000005210	sf1	71	77.963	Oryzias_melastigma
ENSGMOG00000007469	sf1	62	87.941	ENSOGAG00000016196	SF1	52	87.941	Otolemur_garnettii
ENSGMOG00000007469	sf1	62	87.941	ENSOARG00000009166	SF1	58	87.941	Ovis_aries
ENSGMOG00000007469	sf1	61	87.126	ENSPPAG00000002799	-	79	87.126	Pan_paniscus
ENSGMOG00000007469	sf1	59	88.308	ENSPPRG00000013566	SF1	50	88.308	Panthera_pardus
ENSGMOG00000007469	sf1	61	87.425	ENSPTIG00000016141	SF1	58	87.425	Panthera_tigris_altaica
ENSGMOG00000007469	sf1	62	87.941	ENSPTRG00000003846	SF1	79	87.941	Pan_troglodytes
ENSGMOG00000007469	sf1	62	87.941	ENSPANG00000020754	SF1	79	87.941	Papio_anubis
ENSGMOG00000007469	sf1	57	75.740	ENSPKIG00000012116	sf1	90	72.626	Paramormyrops_kingsleyae
ENSGMOG00000007469	sf1	62	87.941	ENSPCIG00000018173	SF1	53	87.941	Phascolarctos_cinereus
ENSGMOG00000007469	sf1	61	92.560	ENSPFOG00000013683	sf1	72	80.505	Poecilia_formosa
ENSGMOG00000007469	sf1	59	93.865	ENSPLAG00000018076	sf1	73	77.292	Poecilia_latipinna
ENSGMOG00000007469	sf1	59	93.865	ENSPMEG00000005726	sf1	74	77.292	Poecilia_mexicana
ENSGMOG00000007469	sf1	60	93.009	ENSPREG00000004155	sf1	71	78.542	Poecilia_reticulata
ENSGMOG00000007469	sf1	62	87.941	ENSPPYG00000003098	-	62	87.941	Pongo_abelii
ENSGMOG00000007469	sf1	62	87.941	ENSPCOG00000027546	SF1	79	87.683	Propithecus_coquereli
ENSGMOG00000007469	sf1	61	94.595	ENSPNYG00000004673	sf1	71	77.433	Pundamilia_nyererei
ENSGMOG00000007469	sf1	60	91.818	ENSPNAG00000013072	sf1	72	77.035	Pygocentrus_nattereri
ENSGMOG00000007469	sf1	62	87.941	ENSRBIG00000042818	SF1	79	87.941	Rhinopithecus_bieti
ENSGMOG00000007469	sf1	60	87.500	ENSRROG00000045655	SF1	76	88.308	Rhinopithecus_roxellana
ENSGMOG00000007469	sf1	62	73.077	ENSSBOG00000022267	-	86	67.560	Saimiri_boliviensis_boliviensis
ENSGMOG00000007469	sf1	61	86.228	ENSSHAG00000006841	SF1	62	85.841	Sarcophilus_harrisii
ENSGMOG00000007469	sf1	71	78.271	ENSSMAG00000007549	sf1	75	78.049	Scophthalmus_maximus
ENSGMOG00000007469	sf1	61	93.175	ENSSDUG00000003903	sf1	75	78.049	Seriola_dumerili
ENSGMOG00000007469	sf1	61	93.175	ENSSLDG00000013075	sf1	73	78.049	Seriola_lalandi_dorsalis
ENSGMOG00000007469	sf1	59	83.077	ENSSARG00000008180	SF1	61	83.077	Sorex_araneus
ENSGMOG00000007469	sf1	56	89.902	ENSSPUG00000012907	SF1	51	89.744	Sphenodon_punctatus
ENSGMOG00000007469	sf1	61	92.857	ENSSPAG00000019060	sf1	72	77.959	Stegastes_partitus
ENSGMOG00000007469	sf1	62	87.941	ENSSSCG00000013021	SF1	60	87.941	Sus_scrofa
ENSGMOG00000007469	sf1	71	71.820	ENSTNIG00000004820	sf1	84	69.623	Tetraodon_nigroviridis
ENSGMOG00000007469	sf1	62	86.431	ENSUMAG00000007268	SF1	62	87.651	Ursus_maritimus
ENSGMOG00000007469	sf1	62	87.941	ENSVVUG00000028585	SF1	60	87.941	Vulpes_vulpes
ENSGMOG00000007469	sf1	96	63.542	ENSXETG00000008434	sf1	97	63.009	Xenopus_tropicalis
ENSGMOG00000007469	sf1	58	92.453	ENSXCOG00000003704	sf1	80	80.760	Xiphophorus_couchianus
ENSGMOG00000007469	sf1	59	93.846	ENSXMAG00000007822	sf1	74	78.333	Xiphophorus_maculatus