EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000007542 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 26519 bases
Position: chrGeneScaffold_1983:539614-566132
Accession: 29158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000008087	ResIII	PF04851.15	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000008318	-	3543	-	ENSGMOP00000008087	1181 (aa)	-	UPI00023F1453

Gene Model

Click here to download ENSGMOG00000007542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000007542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000007542	si:ch73-63e15.2	79	62.358	ENSGMOG00000018229	sbno1	72	62.358

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000007542	si:ch73-63e15.2	94	68.827	ENSG00000064932	SBNO2	91	66.667	Homo_sapiens
ENSGMOG00000007542	si:ch73-63e15.2	96	88.734	ENSAPOG00000003185	si:ch73-63e15.2	88	86.256	Acanthochromis_polyacanthus
ENSGMOG00000007542	si:ch73-63e15.2	96	88.996	ENSAOCG00000016581	si:ch73-63e15.2	93	86.929	Amphiprion_ocellaris
ENSGMOG00000007542	si:ch73-63e15.2	96	88.908	ENSAPEG00000008862	si:ch73-63e15.2	76	88.908	Amphiprion_percula
ENSGMOG00000007542	si:ch73-63e15.2	95	88.438	ENSATEG00000023838	si:ch73-63e15.2	93	86.910	Anabas_testudineus
ENSGMOG00000007542	si:ch73-63e15.2	98	69.344	ENSAPLG00000007158	SBNO2	95	69.287	Anas_platyrhynchos
ENSGMOG00000007542	si:ch73-63e15.2	96	67.416	ENSANAG00000026685	SBNO2	91	66.638	Aotus_nancymaae
ENSGMOG00000007542	si:ch73-63e15.2	95	86.496	ENSACLG00000005090	si:ch73-63e15.2	72	86.496	Astatotilapia_calliptera
ENSGMOG00000007542	si:ch73-63e15.2	98	78.947	ENSAMXG00000018868	sbno2a	95	80.570	Astyanax_mexicanus
ENSGMOG00000007542	si:ch73-63e15.2	94	80.711	ENSAMXG00000015881	si:ch73-63e15.2	82	80.711	Astyanax_mexicanus
ENSGMOG00000007542	si:ch73-63e15.2	96	68.862	ENSBTAG00000020780	SBNO2	91	67.615	Bos_taurus
ENSGMOG00000007542	si:ch73-63e15.2	94	69.580	ENSCAFG00000019543	SBNO2	87	66.832	Canis_familiaris
ENSGMOG00000007542	si:ch73-63e15.2	94	69.580	ENSCAFG00020017115	SBNO2	90	68.163	Canis_lupus_dingo
ENSGMOG00000007542	si:ch73-63e15.2	98	67.246	ENSCHIG00000026127	SBNO2	90	67.080	Capra_hircus
ENSGMOG00000007542	si:ch73-63e15.2	93	67.848	ENSCAPG00000005731	SBNO2	93	67.936	Cavia_aperea
ENSGMOG00000007542	si:ch73-63e15.2	94	67.810	ENSCPOG00000007477	SBNO2	89	65.779	Cavia_porcellus
ENSGMOG00000007542	si:ch73-63e15.2	96	67.675	ENSCCAG00000037518	SBNO2	90	66.980	Cebus_capucinus
ENSGMOG00000007542	si:ch73-63e15.2	96	68.127	ENSCATG00000037046	SBNO2	91	66.667	Cercocebus_atys
ENSGMOG00000007542	si:ch73-63e15.2	94	69.035	ENSCLAG00000010178	SBNO2	99	69.123	Chinchilla_lanigera
ENSGMOG00000007542	si:ch73-63e15.2	96	68.127	ENSCSAG00000012317	SBNO2	87	66.667	Chlorocebus_sabaeus
ENSGMOG00000007542	si:ch73-63e15.2	99	68.593	ENSCPBG00000008920	SBNO2	94	68.174	Chrysemys_picta_bellii
ENSGMOG00000007542	si:ch73-63e15.2	90	68.984	ENSCANG00000036745	SBNO2	95	68.921	Colobus_angolensis_palliatus
ENSGMOG00000007542	si:ch73-63e15.2	97	66.440	ENSCGRG00001023960	Sbno2	90	64.856	Cricetulus_griseus_chok1gshd
ENSGMOG00000007542	si:ch73-63e15.2	97	67.827	ENSCGRG00000011984	Sbno2	90	66.201	Cricetulus_griseus_crigri
ENSGMOG00000007542	si:ch73-63e15.2	96	83.422	ENSCSEG00000006856	si:ch73-63e15.2	92	87.066	Cynoglossus_semilaevis
ENSGMOG00000007542	si:ch73-63e15.2	95	86.240	ENSCVAG00000005663	si:ch73-63e15.2	77	86.240	Cyprinodon_variegatus
ENSGMOG00000007542	si:ch73-63e15.2	98	77.787	ENSDARG00000098801	sbno2a	86	78.130	Danio_rerio
ENSGMOG00000007542	si:ch73-63e15.2	95	80.834	ENSDARG00000016188	SBNO2	81	80.834	Danio_rerio
ENSGMOG00000007542	si:ch73-63e15.2	95	68.870	ENSDORG00000002916	Sbno2	86	67.347	Dipodomys_ordii
ENSGMOG00000007542	si:ch73-63e15.2	94	70.228	ENSEASG00005021621	SBNO2	92	67.801	Equus_asinus_asinus
ENSGMOG00000007542	si:ch73-63e15.2	94	70.315	ENSECAG00000011827	SBNO2	92	67.884	Equus_caballus
ENSGMOG00000007542	si:ch73-63e15.2	96	86.240	ENSELUG00000020457	si:ch73-63e15.2	79	86.240	Esox_lucius
ENSGMOG00000007542	si:ch73-63e15.2	96	70.638	ENSFALG00000013988	SBNO2	85	70.578	Ficedula_albicollis
ENSGMOG00000007542	si:ch73-63e15.2	92	66.905	ENSFDAG00000015186	SBNO2	85	67.263	Fukomys_damarensis
ENSGMOG00000007542	si:ch73-63e15.2	100	82.007	ENSFHEG00000022262	si:ch73-63e15.2	79	82.421	Fundulus_heteroclitus
ENSGMOG00000007542	si:ch73-63e15.2	97	71.332	ENSGALG00000037522	SBNO2	86	71.272	Gallus_gallus
ENSGMOG00000007542	si:ch73-63e15.2	95	86.065	ENSGAFG00000004860	si:ch73-63e15.2	90	86.065	Gambusia_affinis
ENSGMOG00000007542	si:ch73-63e15.2	99	85.491	ENSGACG00000013190	si:ch73-63e15.2	99	85.738	Gasterosteus_aculeatus
ENSGMOG00000007542	si:ch73-63e15.2	98	69.926	ENSGAGG00000008348	SBNO2	90	69.844	Gopherus_agassizii
ENSGMOG00000007542	si:ch73-63e15.2	95	86.661	ENSHBUG00000010742	si:ch73-63e15.2	75	86.661	Haplochromis_burtoni
ENSGMOG00000007542	si:ch73-63e15.2	94	69.035	ENSHGLG00000008739	SBNO2	86	67.198	Heterocephalus_glaber_female
ENSGMOG00000007542	si:ch73-63e15.2	98	66.611	ENSHGLG00100005269	SBNO2	99	68.996	Heterocephalus_glaber_male
ENSGMOG00000007542	si:ch73-63e15.2	96	85.234	ENSHCOG00000000884	si:ch73-63e15.2	85	85.146	Hippocampus_comes
ENSGMOG00000007542	si:ch73-63e15.2	96	80.509	ENSIPUG00000000537	si:ch73-63e15.2	83	81.012	Ictalurus_punctatus
ENSGMOG00000007542	si:ch73-63e15.2	96	80.769	ENSIPUG00000019672	sbno2	92	80.021	Ictalurus_punctatus
ENSGMOG00000007542	si:ch73-63e15.2	94	69.056	ENSSTOG00000025832	SBNO2	88	67.056	Ictidomys_tridecemlineatus
ENSGMOG00000007542	si:ch73-63e15.2	97	65.646	ENSJJAG00000017397	Sbno2	88	64.750	Jaculus_jaculus
ENSGMOG00000007542	si:ch73-63e15.2	95	87.018	ENSKMAG00000005541	si:ch73-63e15.2	77	87.018	Kryptolebias_marmoratus
ENSGMOG00000007542	si:ch73-63e15.2	52	80.858	ENSLBEG00000005937	-	100	80.858	Labrus_bergylta
ENSGMOG00000007542	si:ch73-63e15.2	96	87.771	ENSLBEG00000025016	si:ch73-63e15.2	96	86.772	Labrus_bergylta
ENSGMOG00000007542	si:ch73-63e15.2	53	68.902	ENSLACG00000012598	SBNO2	96	72.355	Latimeria_chalumnae
ENSGMOG00000007542	si:ch73-63e15.2	95	83.628	ENSLOCG00000004643	si:ch73-63e15.2	84	83.628	Lepisosteus_oculatus
ENSGMOG00000007542	si:ch73-63e15.2	96	64.298	ENSLAFG00000008824	SBNO2	94	63.386	Loxodonta_africana
ENSGMOG00000007542	si:ch73-63e15.2	95	66.870	ENSMFAG00000040030	SBNO2	92	65.033	Macaca_fascicularis
ENSGMOG00000007542	si:ch73-63e15.2	99	66.889	ENSMMUG00000010886	SBNO2	91	64.838	Macaca_mulatta
ENSGMOG00000007542	si:ch73-63e15.2	97	67.857	ENSMNEG00000039927	SBNO2	91	66.584	Macaca_nemestrina
ENSGMOG00000007542	si:ch73-63e15.2	87	69.582	ENSMLEG00000038556	SBNO2	90	69.487	Mandrillus_leucophaeus
ENSGMOG00000007542	si:ch73-63e15.2	96	87.762	ENSMAMG00000018758	si:ch73-63e15.2	75	87.762	Mastacembelus_armatus
ENSGMOG00000007542	si:ch73-63e15.2	95	86.572	ENSMZEG00005010682	si:ch73-63e15.2	72	86.572	Maylandia_zebra
ENSGMOG00000007542	si:ch73-63e15.2	99	70.423	ENSMGAG00000003801	SBNO2	93	70.340	Meleagris_gallopavo
ENSGMOG00000007542	si:ch73-63e15.2	97	68.394	ENSMAUG00000008034	Sbno2	90	66.914	Mesocricetus_auratus
ENSGMOG00000007542	si:ch73-63e15.2	99	66.256	ENSMICG00000013071	SBNO2	93	66.092	Microcebus_murinus
ENSGMOG00000007542	si:ch73-63e15.2	97	67.827	ENSMOCG00000010504	Sbno2	88	67.001	Microtus_ochrogaster
ENSGMOG00000007542	si:ch73-63e15.2	97	70.383	ENSMODG00000005382	SBNO2	82	70.298	Monodelphis_domestica
ENSGMOG00000007542	si:ch73-63e15.2	78	79.849	ENSMALG00000021831	si:ch73-63e15.2	96	79.849	Monopterus_albus
ENSGMOG00000007542	si:ch73-63e15.2	97	67.572	ENSMUSG00000035673	Sbno2	92	68.739	Mus_musculus
ENSGMOG00000007542	si:ch73-63e15.2	97	67.545	MGP_PahariEiJ_G0030976	Sbno2	88	66.722	Mus_pahari
ENSGMOG00000007542	si:ch73-63e15.2	97	67.969	MGP_SPRETEiJ_G0016381	Sbno2	92	67.600	Mus_spretus
ENSGMOG00000007542	si:ch73-63e15.2	81	71.719	ENSMPUG00000008747	SBNO2	90	71.617	Mustela_putorius_furo
ENSGMOG00000007542	si:ch73-63e15.2	97	66.921	ENSNGAG00000004308	Sbno2	89	65.947	Nannospalax_galili
ENSGMOG00000007542	si:ch73-63e15.2	91	84.840	ENSNBRG00000022968	si:ch73-63e15.2	96	86.705	Neolamprologus_brichardi
ENSGMOG00000007542	si:ch73-63e15.2	89	66.966	ENSNLEG00000001305	SBNO2	91	64.609	Nomascus_leucogenys
ENSGMOG00000007542	si:ch73-63e15.2	78	66.985	ENSMEUG00000013511	-	78	66.879	Notamacropus_eugenii
ENSGMOG00000007542	si:ch73-63e15.2	94	68.799	ENSOPRG00000017238	SBNO2	96	66.979	Ochotona_princeps
ENSGMOG00000007542	si:ch73-63e15.2	94	68.066	ENSODEG00000011822	SBNO2	89	65.892	Octodon_degus
ENSGMOG00000007542	si:ch73-63e15.2	95	87.014	ENSONIG00000002490	si:ch73-63e15.2	91	86.479	Oreochromis_niloticus
ENSGMOG00000007542	si:ch73-63e15.2	96	84.502	ENSORLG00000000913	si:ch73-63e15.2	78	84.502	Oryzias_latipes
ENSGMOG00000007542	si:ch73-63e15.2	96	84.416	ENSORLG00020010978	si:ch73-63e15.2	78	84.416	Oryzias_latipes_hni
ENSGMOG00000007542	si:ch73-63e15.2	96	84.675	ENSORLG00015000202	si:ch73-63e15.2	78	84.675	Oryzias_latipes_hsok
ENSGMOG00000007542	si:ch73-63e15.2	95	85.302	ENSOMEG00000000359	si:ch73-63e15.2	73	85.302	Oryzias_melastigma
ENSGMOG00000007542	si:ch73-63e15.2	96	65.839	ENSOARG00000011130	SBNO2	91	63.599	Ovis_aries
ENSGMOG00000007542	si:ch73-63e15.2	94	68.056	ENSPPAG00000032482	SBNO2	93	66.224	Pan_paniscus
ENSGMOG00000007542	si:ch73-63e15.2	97	67.687	ENSPTRG00000010185	SBNO2	91	66.419	Pan_troglodytes
ENSGMOG00000007542	si:ch73-63e15.2	96	64.777	ENSPANG00000009658	SBNO2	91	63.425	Papio_anubis
ENSGMOG00000007542	si:ch73-63e15.2	94	83.348	ENSPKIG00000024201	si:ch73-63e15.2	82	83.126	Paramormyrops_kingsleyae
ENSGMOG00000007542	si:ch73-63e15.2	85	77.353	ENSPKIG00000009707	-	83	77.313	Paramormyrops_kingsleyae
ENSGMOG00000007542	si:ch73-63e15.2	80	72.653	ENSPSIG00000002852	SBNO2	99	72.551	Pelodiscus_sinensis
ENSGMOG00000007542	si:ch73-63e15.2	96	83.172	ENSPMGG00000014375	si:ch73-63e15.2	88	82.907	Periophthalmus_magnuspinnatus
ENSGMOG00000007542	si:ch73-63e15.2	97	66.809	ENSPEMG00000024122	Sbno2	88	65.601	Peromyscus_maniculatus_bairdii
ENSGMOG00000007542	si:ch73-63e15.2	91	71.802	ENSPCIG00000011264	SBNO2	82	70.609	Phascolarctos_cinereus
ENSGMOG00000007542	si:ch73-63e15.2	95	85.977	ENSPFOG00000004096	si:ch73-63e15.2	99	83.975	Poecilia_formosa
ENSGMOG00000007542	si:ch73-63e15.2	95	85.890	ENSPLAG00000014653	si:ch73-63e15.2	76	85.890	Poecilia_latipinna
ENSGMOG00000007542	si:ch73-63e15.2	95	85.890	ENSPMEG00000002129	si:ch73-63e15.2	90	86.114	Poecilia_mexicana
ENSGMOG00000007542	si:ch73-63e15.2	95	85.627	ENSPREG00000006755	si:ch73-63e15.2	72	85.627	Poecilia_reticulata
ENSGMOG00000007542	si:ch73-63e15.2	93	65.691	ENSPCAG00000012256	SBNO2	84	65.487	Procavia_capensis
ENSGMOG00000007542	si:ch73-63e15.2	94	62.772	ENSPCOG00000015216	SBNO2	93	60.343	Propithecus_coquereli
ENSGMOG00000007542	si:ch73-63e15.2	95	86.572	ENSPNYG00000019926	si:ch73-63e15.2	76	86.572	Pundamilia_nyererei
ENSGMOG00000007542	si:ch73-63e15.2	95	82.076	ENSPNAG00000020260	si:ch73-63e15.2	82	82.076	Pygocentrus_nattereri
ENSGMOG00000007542	si:ch73-63e15.2	99	77.881	ENSPNAG00000026609	sbno2a	83	78.973	Pygocentrus_nattereri
ENSGMOG00000007542	si:ch73-63e15.2	97	68.139	ENSRNOG00000013987	Sbno2	93	67.140	Rattus_norvegicus
ENSGMOG00000007542	si:ch73-63e15.2	99	61.398	ENSRBIG00000009740	SBNO2	94	61.148	Rhinopithecus_bieti
ENSGMOG00000007542	si:ch73-63e15.2	85	71.728	ENSRROG00000044671	SBNO2	89	71.358	Rhinopithecus_roxellana
ENSGMOG00000007542	si:ch73-63e15.2	96	67.502	ENSSBOG00000023562	SBNO2	91	66.723	Saimiri_boliviensis_boliviensis
ENSGMOG00000007542	si:ch73-63e15.2	93	71.556	ENSSHAG00000010241	SBNO2	97	71.467	Sarcophilus_harrisii
ENSGMOG00000007542	si:ch73-63e15.2	95	81.439	ENSSFOG00015005861	si:ch73-63e15.2	92	81.439	Scleropages_formosus
ENSGMOG00000007542	si:ch73-63e15.2	96	88.112	ENSSMAG00000012489	si:ch73-63e15.2	74	88.112	Scophthalmus_maximus
ENSGMOG00000007542	si:ch73-63e15.2	96	88.889	ENSSDUG00000003527	si:ch73-63e15.2	74	88.889	Seriola_dumerili
ENSGMOG00000007542	si:ch73-63e15.2	96	88.714	ENSSLDG00000004623	si:ch73-63e15.2	74	88.714	Seriola_lalandi_dorsalis
ENSGMOG00000007542	si:ch73-63e15.2	96	88.899	ENSSPAG00000017717	si:ch73-63e15.2	75	88.899	Stegastes_partitus
ENSGMOG00000007542	si:ch73-63e15.2	95	69.324	ENSSSCG00000030042	SBNO2	92	67.357	Sus_scrofa
ENSGMOG00000007542	si:ch73-63e15.2	92	86.418	ENSTRUG00000018193	si:ch73-63e15.2	86	86.418	Takifugu_rubripes
ENSGMOG00000007542	si:ch73-63e15.2	86	70.296	ENSUAMG00000006568	SBNO2	93	71.163	Ursus_americanus
ENSGMOG00000007542	si:ch73-63e15.2	100	67.024	ENSVVUG00000022823	SBNO2	85	67.024	Vulpes_vulpes
ENSGMOG00000007542	si:ch73-63e15.2	87	76.471	ENSXETG00000021579	sbno2	91	76.471	Xenopus_tropicalis
ENSGMOG00000007542	si:ch73-63e15.2	82	84.525	ENSXCOG00000009209	si:ch73-63e15.2	91	84.766	Xiphophorus_couchianus
ENSGMOG00000007542	si:ch73-63e15.2	95	85.977	ENSXMAG00000012091	si:ch73-63e15.2	84	88.068	Xiphophorus_maculatus