EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000007737 (Gene tree)
Gene ID: -
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: growth factor independent 1A transcription repressor b
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 2329 bases
Position: chrGeneScaffold_2825:298281-300609
Accession: ZDB-GENE-040116-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000008277	zf-C2H2	PF00096.26	3.8e-29	1	6
ENSGMOP00000008277	zf-C2H2	PF00096.26	3.8e-29	2	6
ENSGMOP00000008277	zf-C2H2	PF00096.26	3.8e-29	3	6
ENSGMOP00000008277	zf-C2H2	PF00096.26	3.8e-29	4	6
ENSGMOP00000008277	zf-C2H2	PF00096.26	3.8e-29	5	6
ENSGMOP00000008277	zf-C2H2	PF00096.26	3.8e-29	6	6
ENSGMOP00000008277	zf-met	PF12874.7	0.00025	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000008511	-	1152	-	ENSGMOP00000008277	383 (aa)	-	UPI00023F172A

Gene Model

Click here to download ENSGMOG00000007737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000007737's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000007737	gfi1ab	60	32.847	ENSGMOG00000009850	-	99	35.043
ENSGMOG00000007737	gfi1ab	83	39.264	ENSGMOG00000015143	-	51	39.264
ENSGMOG00000007737	gfi1ab	73	45.588	ENSGMOG00000007617	znf367	58	45.588
ENSGMOG00000007737	gfi1ab	56	44.156	ENSGMOG00000003238	-	99	44.156
ENSGMOG00000007737	gfi1ab	100	56.763	ENSGMOG00000017295	GFI1	100	57.005
ENSGMOG00000007737	gfi1ab	58	39.785	ENSGMOG00000016007	-	92	39.785
ENSGMOG00000007737	gfi1ab	58	38.372	ENSGMOG00000007875	ZNF319	99	38.372

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000007737	gfi1ab	100	60.465	ENSG00000162676	GFI1	100	60.698	Homo_sapiens
ENSGMOG00000007737	gfi1ab	100	75.127	ENSAPOG00000015189	gfi1ab	100	75.127	Acanthochromis_polyacanthus
ENSGMOG00000007737	gfi1ab	100	74.359	ENSACIG00000016354	gfi1ab	100	74.359	Amphilophus_citrinellus
ENSGMOG00000007737	gfi1ab	100	52.745	ENSAOCG00000008339	gfi1ab	100	53.731	Amphiprion_ocellaris
ENSGMOG00000007737	gfi1ab	100	75.381	ENSAPEG00000023870	gfi1ab	100	75.381	Amphiprion_percula
ENSGMOG00000007737	gfi1ab	100	70.769	ENSATEG00000009167	gfi1ab	89	70.769	Anabas_testudineus
ENSGMOG00000007737	gfi1ab	82	67.485	ENSAPLG00000015700	GFI1	94	67.485	Anas_platyrhynchos
ENSGMOG00000007737	gfi1ab	100	62.319	ENSACAG00000004498	GFI1	100	63.882	Anolis_carolinensis
ENSGMOG00000007737	gfi1ab	100	61.253	ENSANAG00000019656	GFI1	100	61.253	Aotus_nancymaae
ENSGMOG00000007737	gfi1ab	100	74.365	ENSACLG00000026458	gfi1ab	93	74.365	Astatotilapia_calliptera
ENSGMOG00000007737	gfi1ab	100	65.404	ENSAMXG00000039600	gfi1ab	100	65.404	Astyanax_mexicanus
ENSGMOG00000007737	gfi1ab	100	53.125	ENSAMXG00000006669	GFI1	100	53.125	Astyanax_mexicanus
ENSGMOG00000007737	gfi1ab	100	61.939	ENSBTAG00000016723	GFI1	100	62.175	Bos_taurus
ENSGMOG00000007737	gfi1ab	100	60.233	ENSCJAG00000017609	GFI1	100	60.599	Callithrix_jacchus
ENSGMOG00000007737	gfi1ab	100	61.939	ENSCAFG00000020155	GFI1	100	61.939	Canis_familiaris
ENSGMOG00000007737	gfi1ab	100	61.939	ENSCAFG00020013371	GFI1	88	61.939	Canis_lupus_dingo
ENSGMOG00000007737	gfi1ab	100	61.939	ENSCHIG00000016135	GFI1	100	61.702	Capra_hircus
ENSGMOG00000007737	gfi1ab	100	61.449	ENSCPOG00000011727	GFI1	100	62.150	Cavia_porcellus
ENSGMOG00000007737	gfi1ab	100	60.233	ENSCCAG00000036072	GFI1	100	60.465	Cebus_capucinus
ENSGMOG00000007737	gfi1ab	100	60.233	ENSCATG00000037873	GFI1	100	60.465	Cercocebus_atys
ENSGMOG00000007737	gfi1ab	100	65.337	ENSCLAG00000005915	GFI1	100	59.681	Chinchilla_lanigera
ENSGMOG00000007737	gfi1ab	98	54.301	ENSCSAG00000001469	GFI1	100	54.570	Chlorocebus_sabaeus
ENSGMOG00000007737	gfi1ab	100	60.000	ENSCANG00000034077	GFI1	100	60.233	Colobus_angolensis_palliatus
ENSGMOG00000007737	gfi1ab	100	61.449	ENSCGRG00001015432	Gfi1	100	61.916	Cricetulus_griseus_chok1gshd
ENSGMOG00000007737	gfi1ab	100	61.654	ENSCSEG00000017729	GFI1	100	61.250	Cynoglossus_semilaevis
ENSGMOG00000007737	gfi1ab	100	72.152	ENSCVAG00000011828	gfi1ab	100	72.152	Cyprinodon_variegatus
ENSGMOG00000007737	gfi1ab	100	59.459	ENSCVAG00000004930	GFI1	100	60.147	Cyprinodon_variegatus
ENSGMOG00000007737	gfi1ab	100	68.421	ENSDARG00000044457	gfi1ab	100	68.421	Danio_rerio
ENSGMOG00000007737	gfi1ab	100	61.502	ENSDNOG00000000782	GFI1	97	62.207	Dasypus_novemcinctus
ENSGMOG00000007737	gfi1ab	100	63.095	ENSEASG00005015509	GFI1	86	63.095	Equus_asinus_asinus
ENSGMOG00000007737	gfi1ab	91	54.145	ENSECAG00000006647	GFI1	92	54.145	Equus_caballus
ENSGMOG00000007737	gfi1ab	100	60.930	ENSEEUG00000000198	GFI1	100	61.667	Erinaceus_europaeus
ENSGMOG00000007737	gfi1ab	100	60.750	ENSELUG00000019033	GFI1	100	60.750	Esox_lucius
ENSGMOG00000007737	gfi1ab	100	72.319	ENSELUG00000003015	gfi1ab	99	72.319	Esox_lucius
ENSGMOG00000007737	gfi1ab	100	60.981	ENSFCAG00000005914	GFI1	100	60.981	Felis_catus
ENSGMOG00000007737	gfi1ab	100	60.149	ENSFHEG00000000341	GFI1	100	61.235	Fundulus_heteroclitus
ENSGMOG00000007737	gfi1ab	100	71.646	ENSFHEG00000010997	gfi1ab	100	71.646	Fundulus_heteroclitus
ENSGMOG00000007737	gfi1ab	100	64.146	ENSGALG00000043650	GFI1	100	64.146	Gallus_gallus
ENSGMOG00000007737	gfi1ab	100	60.396	ENSGAFG00000018063	GFI1	100	60.976	Gambusia_affinis
ENSGMOG00000007737	gfi1ab	100	73.367	ENSGAFG00000016637	gfi1ab	100	73.367	Gambusia_affinis
ENSGMOG00000007737	gfi1ab	100	75.192	ENSGACG00000004257	gfi1ab	97	75.192	Gasterosteus_aculeatus
ENSGMOG00000007737	gfi1ab	100	60.465	ENSGGOG00000005320	GFI1	100	60.698	Gorilla_gorilla
ENSGMOG00000007737	gfi1ab	100	74.293	ENSHBUG00000011969	gfi1ab	100	74.293	Haplochromis_burtoni
ENSGMOG00000007737	gfi1ab	100	62.972	ENSHGLG00000008020	GFI1	100	62.911	Heterocephalus_glaber_female
ENSGMOG00000007737	gfi1ab	100	62.972	ENSHGLG00100000610	GFI1	100	62.911	Heterocephalus_glaber_male
ENSGMOG00000007737	gfi1ab	100	58.435	ENSHCOG00000008590	gfi1ab	100	58.435	Hippocampus_comes
ENSGMOG00000007737	gfi1ab	100	58.313	ENSHCOG00000019555	GFI1	100	59.214	Hippocampus_comes
ENSGMOG00000007737	gfi1ab	100	64.848	ENSIPUG00000021407	-	52	64.848	Ictalurus_punctatus
ENSGMOG00000007737	gfi1ab	100	66.412	ENSIPUG00000010071	gfi1ab	87	66.412	Ictalurus_punctatus
ENSGMOG00000007737	gfi1ab	100	60.199	ENSIPUG00000013414	GFI1	100	60.199	Ictalurus_punctatus
ENSGMOG00000007737	gfi1ab	100	59.629	ENSSTOG00000014583	GFI1	100	60.514	Ictidomys_tridecemlineatus
ENSGMOG00000007737	gfi1ab	100	70.918	ENSKMAG00000003810	gfi1ab	100	70.918	Kryptolebias_marmoratus
ENSGMOG00000007737	gfi1ab	100	73.980	ENSLBEG00000027776	gfi1ab	100	73.980	Labrus_bergylta
ENSGMOG00000007737	gfi1ab	100	65.750	ENSLACG00000013362	GFI1	98	65.750	Latimeria_chalumnae
ENSGMOG00000007737	gfi1ab	99	46.335	ENSLACG00000017590	-	99	46.354	Latimeria_chalumnae
ENSGMOG00000007737	gfi1ab	100	69.925	ENSLOCG00000004711	gfi1ab	100	69.925	Lepisosteus_oculatus
ENSGMOG00000007737	gfi1ab	100	59.529	ENSLAFG00000018346	GFI1	100	59.529	Loxodonta_africana
ENSGMOG00000007737	gfi1ab	100	60.233	ENSMFAG00000045801	GFI1	100	60.465	Macaca_fascicularis
ENSGMOG00000007737	gfi1ab	100	60.233	ENSMNEG00000036338	GFI1	100	60.465	Macaca_nemestrina
ENSGMOG00000007737	gfi1ab	100	60.233	ENSMLEG00000036181	GFI1	100	60.465	Mandrillus_leucophaeus
ENSGMOG00000007737	gfi1ab	100	75.318	ENSMAMG00000008125	gfi1ab	100	75.318	Mastacembelus_armatus
ENSGMOG00000007737	gfi1ab	100	74.112	ENSMZEG00005009895	gfi1ab	100	74.112	Maylandia_zebra
ENSGMOG00000007737	gfi1ab	82	68.308	ENSMGAG00000008187	GFI1	94	68.308	Meleagris_gallopavo
ENSGMOG00000007737	gfi1ab	100	61.502	ENSMICG00000047208	GFI1	100	61.502	Microcebus_murinus
ENSGMOG00000007737	gfi1ab	100	67.506	ENSMMOG00000005556	gfi1ab	100	67.506	Mola_mola
ENSGMOG00000007737	gfi1ab	100	61.163	ENSMODG00000011802	GFI1	100	61.628	Monodelphis_domestica
ENSGMOG00000007737	gfi1ab	100	73.077	ENSMALG00000014672	gfi1ab	100	73.077	Monopterus_albus
ENSGMOG00000007737	gfi1ab	100	60.890	MGP_CAROLIEiJ_G0027508	Gfi1	99	98.507	Mus_caroli
ENSGMOG00000007737	gfi1ab	100	61.124	ENSMUSG00000029275	Gfi1	100	61.124	Mus_musculus
ENSGMOG00000007737	gfi1ab	100	61.124	MGP_PahariEiJ_G0017280	Gfi1	99	98.507	Mus_pahari
ENSGMOG00000007737	gfi1ab	100	61.124	MGP_SPRETEiJ_G0028507	Gfi1	100	61.124	Mus_spretus
ENSGMOG00000007737	gfi1ab	100	66.324	ENSMPUG00000004178	GFI1	97	66.581	Mustela_putorius_furo
ENSGMOG00000007737	gfi1ab	100	60.570	ENSMLUG00000015191	GFI1	97	61.283	Myotis_lucifugus
ENSGMOG00000007737	gfi1ab	100	72.431	ENSNBRG00000015774	gfi1ab	100	72.431	Neolamprologus_brichardi
ENSGMOG00000007737	gfi1ab	90	60.733	ENSNLEG00000010470	GFI1	86	64.841	Nomascus_leucogenys
ENSGMOG00000007737	gfi1ab	100	61.395	ENSOPRG00000001473	GFI1	100	61.395	Ochotona_princeps
ENSGMOG00000007737	gfi1ab	100	74.365	ENSONIG00000019246	gfi1ab	100	74.365	Oreochromis_niloticus
ENSGMOG00000007737	gfi1ab	98	55.108	ENSOCUG00000023553	GFI1	93	55.108	Oryctolagus_cuniculus
ENSGMOG00000007737	gfi1ab	100	60.459	ENSORLG00000005060	GFI1	100	61.111	Oryzias_latipes
ENSGMOG00000007737	gfi1ab	100	71.066	ENSORLG00000013806	gfi1ab	100	71.066	Oryzias_latipes
ENSGMOG00000007737	gfi1ab	100	71.684	ENSORLG00020001602	gfi1ab	100	71.684	Oryzias_latipes_hni
ENSGMOG00000007737	gfi1ab	100	56.266	ENSORLG00020002817	GFI1	100	56.266	Oryzias_latipes_hni
ENSGMOG00000007737	gfi1ab	100	60.152	ENSORLG00015006070	GFI1	100	60.253	Oryzias_latipes_hsok
ENSGMOG00000007737	gfi1ab	100	60.401	ENSOMEG00000016722	GFI1	100	62.217	Oryzias_melastigma
ENSGMOG00000007737	gfi1ab	100	63.797	ENSOGAG00000027913	GFI1	100	63.797	Otolemur_garnettii
ENSGMOG00000007737	gfi1ab	100	63.750	ENSPPAG00000042186	GFI1	100	63.750	Pan_paniscus
ENSGMOG00000007737	gfi1ab	100	60.981	ENSPPRG00000007521	GFI1	100	60.981	Panthera_pardus
ENSGMOG00000007737	gfi1ab	100	60.465	ENSPTRG00000043053	GFI1	100	60.698	Pan_troglodytes
ENSGMOG00000007737	gfi1ab	100	60.233	ENSPANG00000016433	GFI1	100	60.465	Papio_anubis
ENSGMOG00000007737	gfi1ab	100	69.652	ENSPKIG00000004263	GFI1	100	69.652	Paramormyrops_kingsleyae
ENSGMOG00000007737	gfi1ab	82	69.419	ENSPSIG00000008734	GFI1	91	69.419	Pelodiscus_sinensis
ENSGMOG00000007737	gfi1ab	99	56.397	ENSPMGG00000011041	GFI1	99	56.397	Periophthalmus_magnuspinnatus
ENSGMOG00000007737	gfi1ab	100	69.821	ENSPMGG00000012546	gfi1ab	100	69.821	Periophthalmus_magnuspinnatus
ENSGMOG00000007737	gfi1ab	100	62.085	ENSPCIG00000013728	GFI1	100	62.322	Phascolarctos_cinereus
ENSGMOG00000007737	gfi1ab	57	50.455	ENSPFOG00000024581	-	68	50.455	Poecilia_formosa
ENSGMOG00000007737	gfi1ab	100	72.864	ENSPFOG00000023214	gfi1ab	100	72.864	Poecilia_formosa
ENSGMOG00000007737	gfi1ab	100	72.864	ENSPLAG00000010879	gfi1ab	100	72.864	Poecilia_latipinna
ENSGMOG00000007737	gfi1ab	100	59.852	ENSPLAG00000005376	GFI1	91	61.330	Poecilia_latipinna
ENSGMOG00000007737	gfi1ab	100	60.199	ENSPMEG00000019299	GFI1	100	61.692	Poecilia_mexicana
ENSGMOG00000007737	gfi1ab	100	73.116	ENSPMEG00000013694	gfi1ab	100	73.116	Poecilia_mexicana
ENSGMOG00000007737	gfi1ab	100	72.727	ENSPREG00000014097	gfi1ab	100	72.727	Poecilia_reticulata
ENSGMOG00000007737	gfi1ab	100	56.364	ENSPREG00000007997	GFI1	100	57.031	Poecilia_reticulata
ENSGMOG00000007737	gfi1ab	100	48.966	ENSPCAG00000011020	GFI1	100	48.966	Procavia_capensis
ENSGMOG00000007737	gfi1ab	100	61.972	ENSPCOG00000020540	GFI1	100	61.972	Propithecus_coquereli
ENSGMOG00000007737	gfi1ab	100	61.939	ENSPVAG00000006928	GFI1	100	62.175	Pteropus_vampyrus
ENSGMOG00000007737	gfi1ab	100	74.365	ENSPNYG00000021183	gfi1ab	100	74.365	Pundamilia_nyererei
ENSGMOG00000007737	gfi1ab	100	65.031	ENSPNAG00000014299	-	97	65.031	Pygocentrus_nattereri
ENSGMOG00000007737	gfi1ab	100	56.650	ENSPNAG00000028014	GFI1	100	56.650	Pygocentrus_nattereri
ENSGMOG00000007737	gfi1ab	100	66.240	ENSPNAG00000027258	gfi1ab	100	66.240	Pygocentrus_nattereri
ENSGMOG00000007737	gfi1ab	100	60.606	ENSRNOG00000002042	Gfi1	100	60.606	Rattus_norvegicus
ENSGMOG00000007737	gfi1ab	100	60.233	ENSRBIG00000036467	GFI1	100	60.465	Rhinopithecus_bieti
ENSGMOG00000007737	gfi1ab	100	60.233	ENSRROG00000031687	GFI1	100	60.465	Rhinopithecus_roxellana
ENSGMOG00000007737	gfi1ab	100	60.698	ENSSBOG00000031300	GFI1	100	60.698	Saimiri_boliviensis_boliviensis
ENSGMOG00000007737	gfi1ab	100	70.823	ENSSFOG00015020295	gfi1	100	70.823	Scleropages_formosus
ENSGMOG00000007737	gfi1ab	98	56.140	ENSSFOG00015008114	-	98	38.303	Scleropages_formosus
ENSGMOG00000007737	gfi1ab	100	73.028	ENSSMAG00000002782	gfi1ab	100	73.028	Scophthalmus_maximus
ENSGMOG00000007737	gfi1ab	100	73.454	ENSSDUG00000022410	gfi1ab	100	73.454	Seriola_dumerili
ENSGMOG00000007737	gfi1ab	100	73.969	ENSSLDG00000020163	gfi1ab	100	73.969	Seriola_lalandi_dorsalis
ENSGMOG00000007737	gfi1ab	87	77.580	ENSSPAG00000009140	gfi1ab	100	77.580	Stegastes_partitus
ENSGMOG00000007737	gfi1ab	100	61.871	ENSSSCG00000006902	GFI1	100	62.590	Sus_scrofa
ENSGMOG00000007737	gfi1ab	82	69.969	ENSTGUG00000006060	GFI1	94	69.969	Taeniopygia_guttata
ENSGMOG00000007737	gfi1ab	100	71.756	ENSTRUG00000000415	gfi1ab	100	71.756	Takifugu_rubripes
ENSGMOG00000007737	gfi1ab	100	67.866	ENSTNIG00000000651	gfi1ab	97	68.286	Tetraodon_nigroviridis
ENSGMOG00000007737	gfi1ab	100	62.053	ENSTTRG00000000082	GFI1	100	62.530	Tursiops_truncatus
ENSGMOG00000007737	gfi1ab	100	62.260	ENSUAMG00000021124	GFI1	91	62.500	Ursus_americanus
ENSGMOG00000007737	gfi1ab	100	65.561	ENSXETG00000023006	gfi1	98	65.561	Xenopus_tropicalis
ENSGMOG00000007737	gfi1ab	100	73.232	ENSXMAG00000010523	gfi1ab	100	73.232	Xiphophorus_maculatus
ENSGMOG00000007737	gfi1ab	57	51.351	ENSXMAG00000006527	-	68	51.351	Xiphophorus_maculatus
ENSGMOG00000007737	gfi1ab	100	52.874	ENSXMAG00000009274	GFI1	70	54.441	Xiphophorus_maculatus