EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGMOG00000007741 (Gene tree)
Gene ID
-
Gene Symbol
snrpf
Alias
snrpfl
Full Name
small nuclear ribonucleoprotein polypeptide F
Gene Type
protein_coding
Species
Gadus_morhua
Status
putative
Strand
Minus strand
Length
1274 bases
Position
chrGeneScaffold_4223:69286-70559
Accession
ZDB-GENE-040930-9
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGMOP00000008279LSMPF01423.224.7e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGMOT00000008514-258-ENSGMOP0000000827985 (aa)-UPI0000D8E23E
Gene Model
Click here to download ENSGMOG00000007741's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000007741's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGMOG00000007741snrpf7850.000ENSGMOG00000015550lsm68350.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGMOG00000007741snrpf10097.647ENSG00000139343SNRPF9997.647Homo_sapiens
ENSGMOG00000007741snrpf100100.000ENSAPOG00000003377snrpf66100.000Acanthochromis_polyacanthus
ENSGMOG00000007741snrpf8884.000ENSAMEG00000018718-8685.135Ailuropoda_melanoleuca
ENSGMOG00000007741snrpf10097.647ENSAMEG00000002166-10097.647Ailuropoda_melanoleuca
ENSGMOG00000007741snrpf99100.000ENSACIG00000013216snrpf99100.000Amphilophus_citrinellus
ENSGMOG00000007741snrpf99100.000ENSAOCG00000015108snrpf99100.000Amphiprion_ocellaris
ENSGMOG00000007741snrpf99100.000ENSAPEG00000022022snrpf99100.000Amphiprion_percula
ENSGMOG00000007741snrpf99100.000ENSATEG00000022625snrpf90100.000Anabas_testudineus
ENSGMOG00000007741snrpf10096.471ENSACAG00000014073SNRPF9896.471Anolis_carolinensis
ENSGMOG00000007741snrpf8488.732ENSANAG00000020297-6588.732Aotus_nancymaae
ENSGMOG00000007741snrpf10097.647ENSANAG00000032845SNRPF9997.647Aotus_nancymaae
ENSGMOG00000007741snrpf8767.568ENSANAG00000025860-8367.568Aotus_nancymaae
ENSGMOG00000007741snrpf99100.000ENSACLG00000016066snrpf99100.000Astatotilapia_calliptera
ENSGMOG00000007741snrpf8797.297ENSAMXG00000007421snrpf8697.297Astyanax_mexicanus
ENSGMOG00000007741snrpf10097.647ENSBTAG00000016271SNRPF9997.647Bos_taurus
ENSGMOG00000007741snrpf9190.909ENSBTAG00000050012-9190.541Bos_taurus
ENSGMOG00000007741snrpf9171.429WBGene00004918snr-58573.611Caenorhabditis_elegans
ENSGMOG00000007741snrpf10097.647ENSCJAG00000002705-9997.647Callithrix_jacchus
ENSGMOG00000007741snrpf8491.549ENSCAFG00000031151-8591.781Canis_familiaris
ENSGMOG00000007741snrpf10097.647ENSCAFG00000006395-7797.647Canis_familiaris
ENSGMOG00000007741snrpf9285.897ENSCAFG00020013161-7494.286Canis_lupus_dingo
ENSGMOG00000007741snrpf8491.549ENSCAFG00020010823-8591.781Canis_lupus_dingo
ENSGMOG00000007741snrpf8783.784ENSTSYG00000030635-8683.784Carlito_syrichta
ENSGMOG00000007741snrpf8792.000ENSTSYG00000036502-8692.000Carlito_syrichta
ENSGMOG00000007741snrpf9591.358ENSTSYG00000031636-6193.151Carlito_syrichta
ENSGMOG00000007741snrpf10097.647ENSCAPG00000007242SNRPF10097.647Cavia_aperea
ENSGMOG00000007741snrpf10097.647ENSCPOG00000013898SNRPF9997.647Cavia_porcellus
ENSGMOG00000007741snrpf10096.471ENSCCAG00000017356-9996.471Cebus_capucinus
ENSGMOG00000007741snrpf9988.095ENSCCAG00000033627-5789.041Cebus_capucinus
ENSGMOG00000007741snrpf10097.647ENSCCAG00000037378-9997.647Cebus_capucinus
ENSGMOG00000007741snrpf10097.647ENSCLAG00000007200SNRPF9997.647Chinchilla_lanigera
ENSGMOG00000007741snrpf10097.647ENSCSAG00000003602-6997.647Chlorocebus_sabaeus
ENSGMOG00000007741snrpf7496.825ENSCHOG00000009392SNRPF9896.825Choloepus_hoffmanni
ENSGMOG00000007741snrpf10087.059ENSCPBG00000026463-8687.838Chrysemys_picta_bellii
ENSGMOG00000007741snrpf10091.765ENSCPBG00000024287-6093.243Chrysemys_picta_bellii
ENSGMOG00000007741snrpf8789.189ENSCPBG00000006227-8689.189Chrysemys_picta_bellii
ENSGMOG00000007741snrpf10085.882ENSCPBG00000001985-8887.838Chrysemys_picta_bellii
ENSGMOG00000007741snrpf10087.059ENSCSAVG00000007498-8489.189Ciona_savignyi
ENSGMOG00000007741snrpf10097.647ENSCGRG00001017100-9997.647Cricetulus_griseus_chok1gshd
ENSGMOG00000007741snrpf8690.411ENSCGRG00001008965-5790.411Cricetulus_griseus_chok1gshd
ENSGMOG00000007741snrpf10097.647ENSCGRG00000000336-9997.647Cricetulus_griseus_crigri
ENSGMOG00000007741snrpf9291.026ENSCGRG00000018878-9190.411Cricetulus_griseus_crigri
ENSGMOG00000007741snrpf10098.824ENSCSEG00000004748snrpf9998.824Cynoglossus_semilaevis
ENSGMOG00000007741snrpf100100.000ENSCVAG00000000397snrpf67100.000Cyprinodon_variegatus
ENSGMOG00000007741snrpf10097.701ENSDARG00000105037snrpf9997.701Danio_rerio
ENSGMOG00000007741snrpf10096.471ENSDNOG00000048989-7696.471Dasypus_novemcinctus
ENSGMOG00000007741snrpf10097.647ENSDNOG00000043775-5497.647Dasypus_novemcinctus
ENSGMOG00000007741snrpf8781.081ENSDNOG00000049373-6481.081Dasypus_novemcinctus
ENSGMOG00000007741snrpf6994.915ENSDORG00000029740-7294.915Dipodomys_ordii
ENSGMOG00000007741snrpf8487.324ENSDORG00000025351-9987.324Dipodomys_ordii
ENSGMOG00000007741snrpf9977.381FBgn0000426SmF8380.822Drosophila_melanogaster
ENSGMOG00000007741snrpf10097.647ENSETEG00000001558-9997.647Echinops_telfairi
ENSGMOG00000007741snrpf9675.610ENSEBUG00000001793-7286.567Eptatretus_burgeri
ENSGMOG00000007741snrpf10097.647ENSECAG00000019817SNRPF6997.647Equus_caballus
ENSGMOG00000007741snrpf10097.647ENSEEUG00000013509SNRPF10097.647Erinaceus_europaeus
ENSGMOG00000007741snrpf10097.647ENSELUG00000003121RUXF9997.647Esox_lucius
ENSGMOG00000007741snrpf10094.118ENSELUG00000007737RUXF8595.946Esox_lucius
ENSGMOG00000007741snrpf8772.973ENSFCAG00000021942-8572.973Felis_catus
ENSGMOG00000007741snrpf10097.647ENSFCAG00000029966-9997.647Felis_catus
ENSGMOG00000007741snrpf9875.904ENSFCAG00000031148-7174.026Felis_catus
ENSGMOG00000007741snrpf10097.647ENSFALG00000010799SNRPF9997.647Ficedula_albicollis
ENSGMOG00000007741snrpf10097.647ENSFDAG00000002831-9997.647Fukomys_damarensis
ENSGMOG00000007741snrpf100100.000ENSFHEG00000003240snrpf75100.000Fundulus_heteroclitus
ENSGMOG00000007741snrpf10097.647ENSGALG00000011409SNRPF9997.647Gallus_gallus
ENSGMOG00000007741snrpf99100.000ENSGAFG00000016187snrpf97100.000Gambusia_affinis
ENSGMOG00000007741snrpf10098.824ENSGACG00000020055snrpf10098.824Gasterosteus_aculeatus
ENSGMOG00000007741snrpf9388.608ENSGAGG00000022991-8091.176Gopherus_agassizii
ENSGMOG00000007741snrpf8790.541ENSGAGG00000012945-6891.892Gopherus_agassizii
ENSGMOG00000007741snrpf7293.443ENSGAGG00000020974-5390.476Gopherus_agassizii
ENSGMOG00000007741snrpf7188.333ENSGAGG00000011163-8691.837Gopherus_agassizii
ENSGMOG00000007741snrpf8083.824ENSGAGG00000014132-8283.824Gopherus_agassizii
ENSGMOG00000007741snrpf9274.359ENSGGOG00000039564-8972.973Gorilla_gorilla
ENSGMOG00000007741snrpf10097.647ENSGGOG00000001127-9997.647Gorilla_gorilla
ENSGMOG00000007741snrpf9878.313ENSGGOG00000039936-8275.676Gorilla_gorilla
ENSGMOG00000007741snrpf10096.471ENSHGLG00000021172-9996.471Heterocephalus_glaber_female
ENSGMOG00000007741snrpf10097.647ENSHGLG00000009108SNRPF9997.647Heterocephalus_glaber_female
ENSGMOG00000007741snrpf10097.647ENSHGLG00100008103-10097.647Heterocephalus_glaber_male
ENSGMOG00000007741snrpf10096.471ENSHGLG00100019596-9996.471Heterocephalus_glaber_male
ENSGMOG00000007741snrpf7488.571ENSHCOG00000018663snrpf5588.571Hippocampus_comes
ENSGMOG00000007741snrpf100100.000ENSIPUG00000018994snrpf99100.000Ictalurus_punctatus
ENSGMOG00000007741snrpf10097.647ENSSTOG00000010434-9997.647Ictidomys_tridecemlineatus
ENSGMOG00000007741snrpf10097.647ENSJJAG00000011272-9997.647Jaculus_jaculus
ENSGMOG00000007741snrpf10082.353ENSJJAG00000010502-8883.784Jaculus_jaculus
ENSGMOG00000007741snrpf7991.045ENSJJAG00000004828-8692.857Jaculus_jaculus
ENSGMOG00000007741snrpf10078.824ENSJJAG00000004558-8879.730Jaculus_jaculus
ENSGMOG00000007741snrpf99100.000ENSKMAG00000013566snrpf98100.000Kryptolebias_marmoratus
ENSGMOG00000007741snrpf10098.824ENSLBEG00000008800snrpf9998.824Labrus_bergylta
ENSGMOG00000007741snrpf10097.647ENSLACG00000002456-7397.647Latimeria_chalumnae
ENSGMOG00000007741snrpf10097.647ENSLOCG00000015744snrpf9997.647Lepisosteus_oculatus
ENSGMOG00000007741snrpf10097.647ENSLAFG00000017426SNRPF9997.647Loxodonta_africana
ENSGMOG00000007741snrpf9998.810ENSMAMG00000016593snrpf9998.810Mastacembelus_armatus
ENSGMOG00000007741snrpf99100.000ENSMZEG00005014701snrpf99100.000Maylandia_zebra
ENSGMOG00000007741snrpf9997.619ENSMGAG00000011453-7697.619Meleagris_gallopavo
ENSGMOG00000007741snrpf8797.297ENSMAUG00000016909-10097.297Mesocricetus_auratus
ENSGMOG00000007741snrpf7290.164ENSMAUG00000010289-6694.000Mesocricetus_auratus
ENSGMOG00000007741snrpf8797.297ENSMAUG00000019737-10097.297Mesocricetus_auratus
ENSGMOG00000007741snrpf8793.243ENSMAUG00000008799-8693.243Mesocricetus_auratus
ENSGMOG00000007741snrpf10097.647ENSMICG00000012153-9997.647Microcebus_murinus
ENSGMOG00000007741snrpf8790.541ENSMICG00000030494-5990.541Microcebus_murinus
ENSGMOG00000007741snrpf8080.882ENSMOCG00000020220-8780.882Microtus_ochrogaster
ENSGMOG00000007741snrpf8783.784ENSMOCG00000022166-8183.784Microtus_ochrogaster
ENSGMOG00000007741snrpf10097.647ENSMOCG00000020437Snrpf9997.647Microtus_ochrogaster
ENSGMOG00000007741snrpf10098.824ENSMMOG00000007127snrpf10098.824Mola_mola
ENSGMOG00000007741snrpf10097.647ENSMODG00000008091SNRPF7597.647Monodelphis_domestica
ENSGMOG00000007741snrpf99100.000ENSMALG00000012328snrpf99100.000Monopterus_albus
ENSGMOG00000007741snrpf10097.647MGP_CAROLIEiJ_G0015735-9997.647Mus_caroli
ENSGMOG00000007741snrpf10097.647ENSMUSG00000020018Snrpf9997.647Mus_musculus
ENSGMOG00000007741snrpf10097.647MGP_PahariEiJ_G0031350Snrpf9997.647Mus_pahari
ENSGMOG00000007741snrpf10097.647MGP_SPRETEiJ_G0016553Snrpf9997.647Mus_spretus
ENSGMOG00000007741snrpf10097.647ENSMPUG00000007176-7697.647Mustela_putorius_furo
ENSGMOG00000007741snrpf10097.647ENSMLUG00000013577-10097.647Myotis_lucifugus
ENSGMOG00000007741snrpf10097.647ENSMLUG00000027932-8097.647Myotis_lucifugus
ENSGMOG00000007741snrpf10097.647ENSMLUG00000026149-8097.647Myotis_lucifugus
ENSGMOG00000007741snrpf10097.647ENSMLUG00000029201-8097.647Myotis_lucifugus
ENSGMOG00000007741snrpf10078.824ENSMLUG00000026269-7077.027Myotis_lucifugus
ENSGMOG00000007741snrpf10097.647ENSNGAG00000024292-9997.647Nannospalax_galili
ENSGMOG00000007741snrpf7490.476ENSNGAG00000005851-7190.000Nannospalax_galili
ENSGMOG00000007741snrpf100100.000ENSNBRG00000011682snrpf87100.000Neolamprologus_brichardi
ENSGMOG00000007741snrpf8770.270ENSMEUG00000000671SNRPF8770.270Notamacropus_eugenii
ENSGMOG00000007741snrpf10097.647ENSODEG00000010328-9997.647Octodon_degus
ENSGMOG00000007741snrpf10097.647ENSOCUG00000010925SNRPF7597.647Oryctolagus_cuniculus
ENSGMOG00000007741snrpf8797.297ENSORLG00020008216snrpf8797.297Oryzias_latipes_hni
ENSGMOG00000007741snrpf8797.297ENSORLG00015007418snrpf8797.297Oryzias_latipes_hsok
ENSGMOG00000007741snrpf9998.810ENSOMEG00000003018snrpf9998.810Oryzias_melastigma
ENSGMOG00000007741snrpf8795.946ENSOGAG00000030323-8695.946Otolemur_garnettii
ENSGMOG00000007741snrpf10097.647ENSOARG00000011853-7497.647Ovis_aries
ENSGMOG00000007741snrpf9274.359ENSPPAG00000037479-8972.973Pan_paniscus
ENSGMOG00000007741snrpf9878.313ENSPPAG00000037544-8275.676Pan_paniscus
ENSGMOG00000007741snrpf9874.699ENSPPRG00000007449-7674.324Panthera_pardus
ENSGMOG00000007741snrpf10097.647ENSPPRG00000005875-9997.647Panthera_pardus
ENSGMOG00000007741snrpf10097.647ENSPTIG00000007520SNRPF9997.647Panthera_tigris_altaica
ENSGMOG00000007741snrpf9877.108ENSPTIG00000005117-8874.324Panthera_tigris_altaica
ENSGMOG00000007741snrpf9878.313ENSPTRG00000043814-8275.676Pan_troglodytes
ENSGMOG00000007741snrpf9274.359ENSPTRG00000047717-8972.973Pan_troglodytes
ENSGMOG00000007741snrpf100100.000ENSPKIG00000014784snrpf93100.000Paramormyrops_kingsleyae
ENSGMOG00000007741snrpf10097.647ENSPSIG00000016462SNRPF9997.647Pelodiscus_sinensis
ENSGMOG00000007741snrpf10098.824ENSPMGG00000023548snrpf10098.824Periophthalmus_magnuspinnatus
ENSGMOG00000007741snrpf10097.647ENSPEMG00000023326Snrpf9997.647Peromyscus_maniculatus_bairdii
ENSGMOG00000007741snrpf99100.000ENSPLAG00000023932snrpf99100.000Poecilia_latipinna
ENSGMOG00000007741snrpf99100.000ENSPMEG00000003377snrpf99100.000Poecilia_mexicana
ENSGMOG00000007741snrpf99100.000ENSPREG00000022635snrpf97100.000Poecilia_reticulata
ENSGMOG00000007741snrpf10097.647ENSPPYG00000004847-9997.647Pongo_abelii
ENSGMOG00000007741snrpf10097.647ENSPCOG00000023833-9997.647Propithecus_coquereli
ENSGMOG00000007741snrpf10097.647ENSPVAG00000009036SNRPF9997.647Pteropus_vampyrus
ENSGMOG00000007741snrpf99100.000ENSPNYG00000021712snrpf99100.000Pundamilia_nyererei
ENSGMOG00000007741snrpf9998.810ENSPNAG00000019117snrpf9998.810Pygocentrus_nattereri
ENSGMOG00000007741snrpf10097.647ENSRNOG00000005556Snrpf9997.647Rattus_norvegicus
ENSGMOG00000007741snrpf8794.595ENSRBIG00000030414-8694.595Rhinopithecus_bieti
ENSGMOG00000007741snrpf8794.595ENSRROG00000021975-8694.595Rhinopithecus_roxellana
ENSGMOG00000007741snrpf8260.563YPR182WSMX38360.563Saccharomyces_cerevisiae
ENSGMOG00000007741snrpf8782.432ENSSBOG00000032297-8582.432Saimiri_boliviensis_boliviensis
ENSGMOG00000007741snrpf10096.471ENSSBOG00000012868-9996.471Saimiri_boliviensis_boliviensis
ENSGMOG00000007741snrpf10097.647ENSSBOG00000036179-9997.647Saimiri_boliviensis_boliviensis
ENSGMOG00000007741snrpf9177.500ENSSBOG00000027638-9077.500Saimiri_boliviensis_boliviensis
ENSGMOG00000007741snrpf10097.647ENSSHAG00000012294SNRPF7797.647Sarcophilus_harrisii
ENSGMOG00000007741snrpf75100.000ENSSFOG00015021523snrpf96100.000Scleropages_formosus
ENSGMOG00000007741snrpf10098.824ENSSMAG00000005533snrpf9898.824Scophthalmus_maximus
ENSGMOG00000007741snrpf75100.000ENSSDUG00000016283snrpf76100.000Seriola_dumerili
ENSGMOG00000007741snrpf99100.000ENSSLDG00000005119snrpf98100.000Seriola_lalandi_dorsalis
ENSGMOG00000007741snrpf9471.250ENSSLDG00000003885-9074.324Seriola_lalandi_dorsalis
ENSGMOG00000007741snrpf9997.619ENSSPUG00000014590-9997.619Sphenodon_punctatus
ENSGMOG00000007741snrpf100100.000ENSSPAG00000003283snrpf97100.000Stegastes_partitus
ENSGMOG00000007741snrpf10097.647ENSSSCG00000000895SNRPF9997.647Sus_scrofa
ENSGMOG00000007741snrpf8198.551ENSTRUG00000014956snrpf10098.551Takifugu_rubripes
ENSGMOG00000007741snrpf10098.824ENSTNIG00000012672snrpf9998.824Tetraodon_nigroviridis
ENSGMOG00000007741snrpf8770.270ENSTTRG00000006070SNRPF8670.270Tursiops_truncatus
ENSGMOG00000007741snrpf10097.647ENSUAMG00000008176-9997.647Ursus_americanus
ENSGMOG00000007741snrpf10084.706ENSUAMG00000001101-8786.486Ursus_americanus
ENSGMOG00000007741snrpf8786.486ENSUMAG00000006177-8786.486Ursus_maritimus
ENSGMOG00000007741snrpf10097.647ENSUMAG00000003528-9997.647Ursus_maritimus
ENSGMOG00000007741snrpf10097.647ENSVPAG00000008712-9997.647Vicugna_pacos
ENSGMOG00000007741snrpf9189.610ENSVVUG00000023821-9589.189Vulpes_vulpes
ENSGMOG00000007741snrpf8775.000ENSXETG00000021630snrpf8775.000Xenopus_tropicalis
ENSGMOG00000007741snrpf99100.000ENSXCOG00000013860snrpf97100.000Xiphophorus_couchianus
ENSGMOG00000007741snrpf99100.000ENSXMAG00000015448snrpf99100.000Xiphophorus_maculatus

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